Miyakogusa Predicted Gene

Lj1g3v2809160.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2809160.2 Non Characterized Hit- tr|I3SMN6|I3SMN6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.57,0,UPF0016,Uncharacterised protein family UPF0016;
TRANSMEMBRANE PROTEIN HTP-1 RELATED,Uncharacterised ,CUFF.29528.2
         (279 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g079850.1 | GDT1-like protein | HC | chr7:30338141-3034186...   400   e-112
Medtr1g111390.1 | transmembrane protein PFT27 | HC | chr1:503285...   151   5e-37
Medtr1g046730.1 | GDT1-like protein | HC | chr1:17623011-1763196...   137   1e-32
Medtr5g009810.1 | GDT1-like protein | HC | chr5:2467567-2472426 ...   100   1e-21

>Medtr7g079850.1 | GDT1-like protein | HC | chr7:30338141-30341860 |
           20130731
          Length = 284

 Score =  400 bits (1027), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/287 (75%), Positives = 233/287 (81%), Gaps = 12/287 (4%)

Query: 1   MALRFN-DRRTTALAILLCFLFHLSPTLAQDSLA-----QIGGSVDLGRRGKVMLH--HN 52
           MALRFN +   T LA+LLCF+     T AQDSLA     + GGSVDLGRR KV L+   N
Sbjct: 1   MALRFNTNGGITFLALLLCFVVQ---TFAQDSLAHDDRQESGGSVDLGRRAKVALNDIEN 57

Query: 53  ASVISIGLDSTGVGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALI 112
            SVIS+ LDS+GVGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALI
Sbjct: 58  GSVISLSLDSSGVGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALI 117

Query: 113 IMTVLSTGLGRIVPNLISKKHTNSAATVLYAFFGLRLLYIAWRSSDSKTSQXXXXXXXXX 172
           IMTVLSTGLGRIVPNLISKKHTNSAATVLY FFGLRLLYIAW+ SD K+SQ         
Sbjct: 118 IMTVLSTGLGRIVPNLISKKHTNSAATVLYLFFGLRLLYIAWK-SDPKSSQKKEMEEVEE 176

Query: 173 XXXXXXXXTXXXXXXXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAT 232
                   T         CTPIFLESF+LTFLAEWGDRSQIATIALATHKNA+GVA GAT
Sbjct: 177 KLEGGQGKTSFRRFFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAIGVAAGAT 236

Query: 233 IGHTICTSVAVVGGSMLASKISQRTVATVGGLLFLGFSVSSYYYPPL 279
           IGHTICTSVAVVGGSMLAS+ISQR+VATVGGLLFLGFS+SSY+YPPL
Sbjct: 237 IGHTICTSVAVVGGSMLASRISQRSVATVGGLLFLGFSLSSYFYPPL 283


>Medtr1g111390.1 | transmembrane protein PFT27 | HC |
           chr1:50328505-50332843 | 20130731
          Length = 227

 Score =  151 bits (382), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 124/229 (54%), Gaps = 28/229 (12%)

Query: 69  DAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNL 128
             F  SL+M ++SEIGD+TF  AA++AMRHP+ +VL+G L+ALI+MT+LS  +G   PNL
Sbjct: 6   QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLTGCLAALIVMTILSVLVGWAAPNL 65

Query: 129 ISKKHTNSAATVLYAFFGLRLLYIA--------------------WRSSDSKTSQXXXXX 168
           IS+   +   T+L+  FGL  L  A                    W++ +  T       
Sbjct: 66  ISRSWAHHITTLLFFGFGLWSLKEAIFGEGESEELAEVEAELDKDWKAKNGATKDSKKVD 125

Query: 169 XXXXXXXXXXXXTXXXXXXXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVA 228
                                  +PI L++F +TF  EWGD+SQ+ATI LA  +N  GV 
Sbjct: 126 DATKKHKRPFLSQFF--------SPILLQAFSITFFGEWGDKSQLATIGLAADENPFGVV 177

Query: 229 VGATIGHTICTSVAVVGGSMLASKISQRTVATVGGLLFLGFSVSSYYYP 277
           +G  +G  +CT+ AV+GG  LAS+IS++ +   GG+LF+ F + S+  P
Sbjct: 178 LGGILGQALCTTAAVIGGKSLASQISEKVIGLSGGILFIVFGIQSFLSP 226


>Medtr1g046730.1 | GDT1-like protein | HC | chr1:17623011-17631961 |
           20130731
          Length = 365

 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 8/212 (3%)

Query: 71  FFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNLIS 130
           F A+ ++I VSEIGD+TF IAAL+AM++ K +VL G++ AL +M++LS  +GRI  ++ +
Sbjct: 152 FTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGALALMSILSVVIGRIFQSVPA 211

Query: 131 KKHT-----NSAATVLYAFFGLRLLYIAWR--SSDSKTSQXXXXXXXXXXXXXXXXXTXX 183
           +  T       AA  L  FFGL+ +  AW   S D K                       
Sbjct: 212 QFQTTLPIGEYAAVTLLLFFGLKSIKDAWDLPSKDVKNGDNSSPELDELAEAEELVKEKA 271

Query: 184 XXXXXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGATIGHTICTSVAV 243
                     I  +SF L F AEWGDRS +ATIALA  ++  GVA GA  GH + T +A+
Sbjct: 272 SQRLSNPLE-IIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGAIAGHLLATCIAI 330

Query: 244 VGGSMLASKISQRTVATVGGLLFLGFSVSSYY 275
           VGGS+LA+ IS++ V  +GG LFL F++++++
Sbjct: 331 VGGSLLANYISEKLVGYLGGGLFLIFAIATFF 362


>Medtr5g009810.1 | GDT1-like protein | HC | chr5:2467567-2472426 |
           20130731
          Length = 351

 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 77  MILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRI---VPNLISKKH 133
           +I  SE+GD+TF IAAL+A R+  S+V  G   AL  MTV+S  LGR    V  L+  + 
Sbjct: 145 LIFFSELGDKTFFIAALLAARNSASVVFVGTFGALAAMTVISVALGRTFHYVDELLPFRF 204

Query: 134 TNS-------AATVLYAFFGLRLLYIAWRSSDSKTSQXXXXXXXXXXXXXXXXXTXXXXX 186
             +       AA  L  +FG+  L  A  S   K+                         
Sbjct: 205 GETDLPIDDIAAVCLLVYFGVSTLLDASSSDSQKSDDEQKEAELAVSDFSGDGAGILAAA 264

Query: 187 XXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGATIGHTICTSVAVVGG 246
                T      F+L F+AEWGD+S  +TIALA   + LGV  G+  GH + T +AV+GG
Sbjct: 265 STIVST------FLLVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLIAVLGG 318

Query: 247 SMLASKISQRTVATVGGLLFLGFSVSSYY 275
           S+L + +S++ +A +GG+LFL F+  + +
Sbjct: 319 SLLGTFLSEKVIAYIGGVLFLVFAAVTVF 347