Miyakogusa Predicted Gene

Lj1g3v2808080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2808080.1 tr|Q2HV80|Q2HV80_MEDTR Homeodomain-like
OS=Medicago truncatula GN=MtrDRAFT_AC148994g9v2 PE=4
SV=1,59.96,0,seg,NULL,CUFF.29511.1
         (951 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g079420.1 | hypothetical protein | HC | chr7:30138433-3013...   957   0.0  
Medtr7g079360.1 | hypothetical protein | LC | chr7:30118691-3011...    89   3e-17
Medtr4g096930.1 | chromatin remodeling complex subunit | HC | ch...    85   3e-16

>Medtr7g079420.1 | hypothetical protein | HC |
           chr7:30138433-30130688 | 20130731
          Length = 1144

 Score =  957 bits (2473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/962 (58%), Positives = 654/962 (67%), Gaps = 73/962 (7%)

Query: 1   MFGRKVFLTYKRKRQSQSSSFIQGNCCQTSVCEEACDCSLSTPVKHDKLTAEKASEKDEE 60
           MF  KVF TYKR+R SQS SF+  N  Q SV E+A DCSLS   K  KLT EK SEK EE
Sbjct: 1   MFDNKVFFTYKRRRHSQSRSFVLENQ-QNSVGEDARDCSLS---KQAKLTNEKTSEKHEE 56

Query: 61  KPMDTSDGENPCFECAKQPDCSSSFTIQKPDDL--RAGERGISDATESIVSKQKSLATRI 118
           K  DTSDG+ PCFEC KQP+ S+   +Q+P  L    GE GISD TE  V+  +S  TR 
Sbjct: 57  KSTDTSDGQKPCFECIKQPNHSTPLPVQRPGVLVPEPGELGISDETEMTVTTNESFLTRQ 116

Query: 119 PCEDNSKKDFGESPPVEKA-QNGCDTQRNSHASESSGNEFDNCSNKTIISPPVEMDAGND 177
           PCEDNSKKD  E PP +KA QNG DTQ+NS   E+SGNE DN SN   ISP  E+DAGND
Sbjct: 117 PCEDNSKKDVDEFPPTKKASQNGSDTQKNSFVGENSGNECDNGSNINNISPSAELDAGND 176

Query: 178 LNFINSETPIAREFHSARSDESPALNIPMEDN--SPSKDNFRNPSGQIVTQTNLTSPLIT 235
            N INSET I +E  +A  +ES  LN   + +  SPS+DNFRN S + V QTNL  PLIT
Sbjct: 177 FNLINSETSIPKEISAACDNESLVLNKSTDRSTESPSEDNFRNQSEEKVAQTNLAGPLIT 236

Query: 236 FYRRYKRKECMDGTDRKSKLLKKENISVLTKWSKLANANGNFXXXXXXXXXXXPVDKVPD 295
            YR YKRK  MDGTD       KENI VLTKWS LANAN +            P + V D
Sbjct: 237 -YRCYKRKRSMDGTD-------KENIPVLTKWSMLANANPD--SCDESSCDESPANNVLD 286

Query: 296 LNQSVELSERGKPSDQTEDETSYRNCSMLSVTDLNQSAELSKRGEIYQTQEQVVNADTSC 355
           LNQSVE+SER KP   T+DETS R+ S + +TDLNQS ELS+RGE+ QTQE+V NADT  
Sbjct: 287 LNQSVEISEREKPLGHTQDETSCRSSSRVFLTDLNQSVELSERGELDQTQEKVRNADTPG 346

Query: 356 TCGVVSETCMTQVKEELHHGEDIVQTVSHTSGTEVPSQSCLIHEETQHLRTDCQGVSINT 415
           T GVVSETCMTQV E+  HGEDIV+T  H SGTEVPSQ+ L+H+E +H+  DC+G+ +N 
Sbjct: 347 TSGVVSETCMTQVGEQPGHGEDIVKTDPHMSGTEVPSQNSLMHKEAEHVDKDCEGIPVNV 406

Query: 416 D---CTPAATIADQELEKSQPSVREAGYNDTHNGLNKSGEPQPKFDLAVNSAEERTVDLN 472
           D      A+T ADQELE+ QPSV++A  N   N + KSG  QP+F L  +SAEE TV++N
Sbjct: 407 DSRDLCHASTTADQELEELQPSVKKAIQNVPSNDMKKSGGHQPQFVLPADSAEENTVEVN 466

Query: 473 SVADKHPLDLRIRTVGAKLDSASSRSAIAEDHVSHPEFLDSRDTQLVSEGKAIDGVCSSI 532
             +DKH L L +RT+ AK DS SSRS I E+ V+   FL+S +T+++SEGK ID VCSSI
Sbjct: 467 LGSDKHSLPLAMRTLLAKSDSTSSRSVIVENQVTQLAFLNSSNTKVISEGKTIDDVCSSI 526

Query: 533 TQPQLSGFMMPGESVNVQQTKTNKPRRVPMISLSLGLSLPMELSTGGCDSTNYLSLLPLS 592
           TQ Q                      ++P +SLSLGLSLP+E  T GC     LS LPL 
Sbjct: 527 TQSQ--------------------SEQMPTVSLSLGLSLPVEHETRGC-----LSTLPLF 561

Query: 593 NSITDTRDFVQDGLYHSSTNRKPLLPRHKVVLDKIVNRARALNERGSFQENLKRNPFIWS 652
           N  + TRD VQDGL  SSTNRKPL  RHK VLD IV++ RA NERG FQEN K +P +WS
Sbjct: 562 NLTSGTRDIVQDGLCQSSTNRKPLHLRHKAVLDNIVSKTRASNERGKFQENYKPHPIMWS 621

Query: 653 EEELDFLWIGVRRHGRGNWVAMLRDPRLRFSPLRAPWDLAERWEDEQIKLLKDTCVPQHM 712
           EEELDFLWIGVRRHGRGNW AMLRDPRLRFSPLR PWDLAERWE+EQ+KLLKD+ VP  M
Sbjct: 622 EEELDFLWIGVRRHGRGNWDAMLRDPRLRFSPLRVPWDLAERWEEEQLKLLKDS-VPHFM 680

Query: 713 YPNVERPT-AASLQGNFCFRHLELGSWRQNTMEETKLSPEDVISYRESNLLRQSLAGLNY 771
           +PN ER   AA+LQGN CF   + G+WRQNTMEET LSPED  SYRESN L++SLA    
Sbjct: 681 HPNTERAVAAAALQGNTCFLDPKSGTWRQNTMEETTLSPEDAFSYRESNPLKKSLARSFL 740

Query: 772 QNDTALHSLRPTIHSRRASYNNNI---EWGFFNSPGSSSLSMENSYANDYPFNFSTAKTN 828
           Q++T +  L P IHS RASYNNNI   E GFF+SPGSSS+S ENSY+NDYPFN STAK N
Sbjct: 741 QSNTTVRGLAPNIHSGRASYNNNIDKFELGFFSSPGSSSISRENSYSNDYPFNCSTAKNN 800

Query: 829 LPHWLREAVTTPPMSVEPNLSATVSLSSHPHPEMLGAAERCYHA-DRSCFLPQIRLSGSR 887
           LP WLREA+ TPPMSVEPNLS                AE C+ A  +S FLPQ  L+G +
Sbjct: 801 LPQWLREAINTPPMSVEPNLS----------------AEHCFDAGGKSGFLPQNHLTGLK 844

Query: 888 TNEQFSRTSNGSPHYSTYSRRKYGMMKMNKPLQQHHVSKPXXXXXXXXXXXXEKTISDDN 947
           TNE     SN S HYSTYSRRKYG +KMNK L +HHVSK             E+TISDD+
Sbjct: 845 TNE--VHISNAS-HYSTYSRRKYGTLKMNKSL-EHHVSKQDNLIVIDSDTSSEETISDDH 900

Query: 948 RS 949
           R+
Sbjct: 901 RA 902


>Medtr7g079360.1 | hypothetical protein | LC |
           chr7:30118691-30118389 | 20130731
          Length = 100

 Score = 88.6 bits (218), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 64/97 (65%), Gaps = 1/97 (1%)

Query: 560 VPMISLSLGLSLPMELSTGGCDSTNYLSLLPLSNSITDTRDFVQDGLYHSSTNRKPLLPR 619
           +P I+LSLGLSLP +  T G DST+ LS L L NS    +D V DG   SS N K LL R
Sbjct: 1   MPRITLSLGLSLPKQPETRGFDSTSCLSTLFLLNSTIVPQDVVHDGFCQSSANLKLLLLR 60

Query: 620 HKVVLDKIVNRARALNERGSFQENLKRNPFIWSEEEL 656
           HKVVLD IV ++RAL ER S QEN + +P I S EEL
Sbjct: 61  HKVVLDNIVRKSRALKERRSLQENFEPHP-IRSVEEL 96


>Medtr4g096930.1 | chromatin remodeling complex subunit | HC |
            chr4:38597416-38612562 | 20130731
          Length = 2317

 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 35/59 (59%), Positives = 45/59 (76%)

Query: 651  WSEEELDFLWIGVRRHGRGNWVAMLRDPRLRFSPLRAPWDLAERWEDEQIKLLKDTCVP 709
            WSE+ELD LWIGVRRHGRGNW AMLRD +L+FS  +   +L+ RWE+EQ+K+ +    P
Sbjct: 1794 WSEDELDSLWIGVRRHGRGNWDAMLRDTKLKFSKYKTCEELSVRWEEEQVKVFQGPAFP 1852