Miyakogusa Predicted Gene
- Lj1g3v2741280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2741280.1 Non Characterized Hit- tr|I1N3T9|I1N3T9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56343
PE,87.76,0,Pectate_lyase_3,NULL; Pectin lyase-like,Pectin lyase
fold/virulence factor; SUBFAMILY NOT NAMED,NULL,CUFF.29546.1
(258 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g078680.1 | polygalacturonase/glycoside hydrolase family p... 441 e-124
Medtr8g028725.1 | polygalacturonase/glycoside hydrolase family p... 419 e-117
Medtr8g098840.1 | polygalacturonase/glycoside hydrolase family p... 377 e-105
Medtr1g100050.1 | pectin lyase superfamily protein | HC | chr1:4... 359 2e-99
Medtr7g088550.1 | pectin lyase superfamily protein | HC | chr7:3... 347 7e-96
Medtr1g100040.1 | pectin lyase superfamily protein | HC | chr1:4... 346 2e-95
Medtr1g099850.1 | pectin lyase superfamily protein | HC | chr1:4... 345 2e-95
Medtr1g100060.1 | pectin lyase superfamily protein | HC | chr1:4... 339 2e-93
Medtr1g086030.1 | polygalacturonase/glycoside hydrolase family p... 291 5e-79
Medtr7g110710.1 | polygalacturonase/glycoside hydrolase family p... 285 2e-77
Medtr7g110710.2 | polygalacturonase/glycoside hydrolase family p... 285 3e-77
Medtr3g449590.1 | polygalacturonase/glycoside hydrolase family p... 256 2e-68
Medtr2g435340.1 | polygalacturonase/glycoside hydrolase family p... 254 4e-68
Medtr4g124980.1 | pectin lyase superfamily protein | HC | chr4:5... 253 2e-67
Medtr4g120730.1 | polygalacturonase/glycoside hydrolase family p... 251 4e-67
Medtr3g096330.1 | glycoside hydrolase family 28 protein | HC | c... 246 1e-65
Medtr2g042740.1 | pectin lyase superfamily protein | HC | chr2:1... 244 8e-65
Medtr5g090160.1 | polygalacturonase/glycoside hydrolase family p... 227 8e-60
Medtr2g083670.1 | pectin lyase superfamily protein | HC | chr2:3... 220 1e-57
Medtr1g086030.2 | polygalacturonase/glycoside hydrolase family p... 199 2e-51
Medtr2g435340.3 | polygalacturonase/glycoside hydrolase family p... 159 4e-39
Medtr2g435340.2 | polygalacturonase/glycoside hydrolase family p... 159 4e-39
Medtr2g042750.1 | hypothetical protein | LC | chr2:18643705-1864... 110 9e-25
Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family p... 80 2e-15
Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 ... 75 6e-14
Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family p... 71 9e-13
Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family p... 71 9e-13
Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 | ... 69 5e-12
Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 | ... 69 5e-12
Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family p... 67 1e-11
Medtr7g092470.1 | exo-polyalpha-D-galacturonosidase-like protein... 66 3e-11
Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-1451629... 66 3e-11
Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-3273117... 65 9e-11
Medtr7g091840.1 | endo polygalacturonase | HC | chr7:36349369-36... 64 2e-10
Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 ... 62 4e-10
Medtr2g049400.1 | pectin lyase superfamily protein | LC | chr2:2... 62 5e-10
Medtr8g065030.1 | pectin lyase superfamily protein | HC | chr8:2... 62 7e-10
Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 ... 61 1e-09
Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 ... 59 3e-09
Medtr1g052315.1 | endo polygalacturonase | HC | chr1:21186740-21... 57 1e-08
Medtr7g091850.1 | endo polygalacturonase | HC | chr7:36360735-36... 57 1e-08
Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family p... 57 1e-08
Medtr8g010050.1 | pectin lyase superfamily protein | LC | chr8:2... 57 2e-08
Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family p... 55 7e-08
Medtr4g094715.1 | pectin lyase superfamily protein | HC | chr4:3... 55 8e-08
Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-3939047... 54 1e-07
Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-4988630... 53 3e-07
Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family p... 53 3e-07
Medtr2g103410.2 | polygalacturonase | HC | chr2:44519609-4452318... 53 3e-07
Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-4452318... 53 3e-07
Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-3252202... 51 9e-07
Medtr2g029170.1 | endo-polygalacturonase | HC | chr2:10881421-10... 50 2e-06
Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 ... 50 3e-06
Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 ... 50 3e-06
>Medtr7g078680.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:29762570-29765948 | 20130731
Length = 483
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/258 (85%), Positives = 233/258 (90%)
Query: 1 MELLQKTHLRVQVXXXXXXXXXXXXXSSERGESRKAKIVTTSFEYSAINCRAHSASLTDF 60
M+LL KTH+RVQ+ ER ESRKAKIVTTSF Y+ INCRAHSASLTDF
Sbjct: 1 MKLLWKTHIRVQMIQIFLAIFVVTLVYPERVESRKAKIVTTSFVYNGINCRAHSASLTDF 60
Query: 61 GGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHFTLYLDKEAVL 120
GGVGDG TSNTKAFQSA+SHLSQY SQGGSQLYVPAGKWLTGSFSLTSHFTLYLD++AVL
Sbjct: 61 GGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDRDAVL 120
Query: 121 LASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQQ 180
LASQDITEWPVL PLPSYGRGRDAPAGR+ SLIFGTNLTDVIVTG NGTIDGQGAFWWQQ
Sbjct: 121 LASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQ 180
Query: 181 FHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGITIIAPVTSPN 240
FHRKKLKYTRPYLIELMFSDSIQISNLTLLNSP+WNVHPVYSSNII++GITIIAP++SPN
Sbjct: 181 FHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPN 240
Query: 241 TDGINPDSCTNVKIEDCY 258
TDGINPDSCTN KIEDCY
Sbjct: 241 TDGINPDSCTNTKIEDCY 258
>Medtr8g028725.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr8:11065754-11061041 | 20130731
Length = 479
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/258 (79%), Positives = 227/258 (87%)
Query: 1 MELLQKTHLRVQVXXXXXXXXXXXXXSSERGESRKAKIVTTSFEYSAINCRAHSASLTDF 60
MELL K+H+++ SS+ E RK KI++TSFEYSA+NCRAHS SL DF
Sbjct: 1 MELLWKSHMKIHAMKLVYALLLVTLMSSKVTECRKGKIISTSFEYSALNCRAHSVSLKDF 60
Query: 61 GGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHFTLYLDKEAVL 120
GGVGDGKTSNTKAF+SA+SHLSQ AS+GGSQLYVPAGKWLTGSFSL SHFTLYL K+AVL
Sbjct: 61 GGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHFTLYLHKDAVL 120
Query: 121 LASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQQ 180
LASQDI EWPV+ PLPSYGRGRDA AGR+TSLIFGTNLTDVIVTGDNGTIDGQG+FWWQQ
Sbjct: 121 LASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTIDGQGSFWWQQ 180
Query: 181 FHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGITIIAPVTSPN 240
FH KKLKYTRPYLIELMFSD+IQISNLTLL+SP+WN+HPVYSSNII+KGITIIAP+ SPN
Sbjct: 181 FHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIRSPN 240
Query: 241 TDGINPDSCTNVKIEDCY 258
TDGINPDSCTN KIEDCY
Sbjct: 241 TDGINPDSCTNTKIEDCY 258
>Medtr8g098840.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr8:41331762-41334923 | 20130731
Length = 470
Score = 377 bits (967), Expect = e-105, Method: Compositional matrix adjust.
Identities = 170/227 (74%), Positives = 200/227 (88%)
Query: 32 ESRKAKIVTTSFEYSAINCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQ 91
ESRK + FEY A++CRA+SAS+T+FG GDG T NTKAFQSA+ HLSQY+S GGSQ
Sbjct: 21 ESRKTPVEDYYFEYCAVSCRAYSASVTEFGAAGDGNTLNTKAFQSAIDHLSQYSSNGGSQ 80
Query: 92 LYVPAGKWLTGSFSLTSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTS 151
LYVP G+WLTGSF+LTSHFTL+L K+AV+L SQD +EWPV+ PLPSYGRGRD GRY+S
Sbjct: 81 LYVPPGRWLTGSFNLTSHFTLFLHKDAVILGSQDESEWPVIDPLPSYGRGRDTQGGRYSS 140
Query: 152 LIFGTNLTDVIVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLN 211
LIFGTNLTDV++TG+NGT+DGQG WWQ+FH+ KL YTRPYLIE+M+SD+IQISNLTL+N
Sbjct: 141 LIFGTNLTDVVITGNNGTLDGQGELWWQKFHKGKLTYTRPYLIEIMYSDNIQISNLTLVN 200
Query: 212 SPNWNVHPVYSSNIIVKGITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
SP+WNVHPVYSSNIIV+GITI+APV SPNTDGINPDSCTN +IEDCY
Sbjct: 201 SPSWNVHPVYSSNIIVQGITILAPVNSPNTDGINPDSCTNTRIEDCY 247
>Medtr1g100050.1 | pectin lyase superfamily protein | HC |
chr1:45079785-45077811 | 20130731
Length = 473
Score = 359 bits (921), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 163/223 (73%), Positives = 195/223 (87%)
Query: 36 AKIVTTSFEYSAINCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVP 95
+ I +F+Y AINCR HSA LTDFG VGDGKT NTKAF +A+++LSQYA+ GG+QL VP
Sbjct: 31 SSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVP 90
Query: 96 AGKWLTGSFSLTSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFG 155
GKWLTGSF+LTSHFTL+L K+AV+L SQD +EWP L LPSYGRGRDAPAGR++SLIFG
Sbjct: 91 PGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFG 150
Query: 156 TNLTDVIVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNW 215
TNLTDVI+TGDNGTIDGQG++WW +FH+K+L TRPY+IE+M+SD IQISNLTL+NSP W
Sbjct: 151 TNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTW 210
Query: 216 NVHPVYSSNIIVKGITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
VHP+YSSNII+ G+TI+APV SPNTDGINPDSCTNV+IED +
Sbjct: 211 FVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNF 253
>Medtr7g088550.1 | pectin lyase superfamily protein | HC |
chr7:34506744-34504347 | 20130731
Length = 476
Score = 347 bits (890), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 159/217 (73%), Positives = 191/217 (88%)
Query: 42 SFEYSAINCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLT 101
+ +Y AINCR HSA LTDFGGVGDGKTSNTKAF +A++ LSQYA+ GG+QL VP GKWLT
Sbjct: 37 NLDYLAINCRKHSAVLTDFGGVGDGKTSNTKAFNTAITKLSQYANDGGAQLIVPPGKWLT 96
Query: 102 GSFSLTSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDV 161
GSF+LTSHFTL+L K AV+L SQD ++WP L PLPSYGRGRDAP R++SLIFGT+LTDV
Sbjct: 97 GSFNLTSHFTLFLQKGAVILGSQDESQWPQLPPLPSYGRGRDAPGPRFSSLIFGTHLTDV 156
Query: 162 IVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVY 221
I+TG+NGTIDGQG++WW +FH K+LK TRPY+IE+++SD IQISNLTL+NSP+W VHP Y
Sbjct: 157 IITGNNGTIDGQGSYWWDKFHNKQLKITRPYMIEILYSDQIQISNLTLINSPSWFVHPTY 216
Query: 222 SSNIIVKGITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
SSNII+KG+TI+APV SPNTDGI+PDS TNV+IED Y
Sbjct: 217 SSNIIIKGLTILAPVDSPNTDGIDPDSSTNVRIEDNY 253
>Medtr1g100040.1 | pectin lyase superfamily protein | HC |
chr1:45076650-45074575 | 20130731
Length = 481
Score = 346 bits (887), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 156/217 (71%), Positives = 191/217 (88%)
Query: 42 SFEYSAINCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLT 101
+F+Y AINCR HSA LTDFGGVGDGKT NTKAF SA+++LSQYA+ GG+QL VP GKWLT
Sbjct: 43 NFDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLT 102
Query: 102 GSFSLTSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDV 161
GSF+LTSHFTL+L K++V+LASQD +EWP LPSYG GR+A GR++SL+FGTNLTDV
Sbjct: 103 GSFNLTSHFTLFLQKDSVILASQDESEWPQFPVLPSYGSGRNASDGRFSSLVFGTNLTDV 162
Query: 162 IVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVY 221
I+TG+NGTIDGQG++WW +FH+ ++K TRPY+IE+M+SD IQISNLTL+NSP+W VHPVY
Sbjct: 163 IITGNNGTIDGQGSYWWDKFHKGQMKITRPYMIEIMYSDQIQISNLTLINSPSWFVHPVY 222
Query: 222 SSNIIVKGITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
SSNII+ G+TI+APV PNTDGI+PDSCTNV+IED Y
Sbjct: 223 SSNIIINGLTILAPVDIPNTDGIDPDSCTNVRIEDNY 259
>Medtr1g099850.1 | pectin lyase superfamily protein | HC |
chr1:45068986-45067030 | 20130731
Length = 475
Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 161/229 (70%), Positives = 193/229 (84%), Gaps = 1/229 (0%)
Query: 31 GESRK-AKIVTTSFEYSAINCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGG 89
E R+ + I SF+Y AINCR H+A LTDFG VGDGKT NTKAF SA+++LSQYA+ GG
Sbjct: 30 AECREPSSIKLNSFDYHAINCRKHNAVLTDFGAVGDGKTLNTKAFNSAITNLSQYANDGG 89
Query: 90 SQLYVPAGKWLTGSFSLTSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRY 149
+QL VP GKWLTGSF+LTSHFTL+L K AV+LASQD +EWP L LPSYGR +DAP GR+
Sbjct: 90 AQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILASQDESEWPKLSFLPSYGREKDAPDGRF 149
Query: 150 TSLIFGTNLTDVIVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTL 209
+SLIFGTNLTDV++TG+NGTIDGQG+ WW +F +K+LK TRPY+IE+M+SD IQISNLTL
Sbjct: 150 SSLIFGTNLTDVVITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTL 209
Query: 210 LNSPNWNVHPVYSSNIIVKGITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
+NSPNW VHP+YSSNII+ +TI+APV PNTDGI+PDSCTNV IED Y
Sbjct: 210 INSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDSCTNVLIEDNY 258
>Medtr1g100060.1 | pectin lyase superfamily protein | HC |
chr1:45084624-45082095 | 20130731
Length = 516
Score = 339 bits (869), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 157/217 (72%), Positives = 188/217 (86%)
Query: 42 SFEYSAINCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLT 101
+F+Y AINCR HSA LTDFGGVGDGKT NTKAF SA+++LSQYA+ GG+QL VP GKWLT
Sbjct: 80 NFDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLT 139
Query: 102 GSFSLTSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDV 161
GSF+LTSHFTL+L K+AV+LASQ ++WP L LPSYGRGR+ P GR++SLIFGTNL DV
Sbjct: 140 GSFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDV 199
Query: 162 IVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVY 221
I+TG+NGTIDGQG+ WW +F +K+LK TRPY+IE+M+SD IQISNLTL+NSP+W VHPVY
Sbjct: 200 IITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVY 259
Query: 222 SSNIIVKGITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
SSNII+ G+TI+APV PNTDGI+PDS TNV IED Y
Sbjct: 260 SSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNY 296
>Medtr1g086030.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38488435-38484789 | 20130731
Length = 510
Score = 291 bits (744), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 131/208 (62%), Positives = 165/208 (79%)
Query: 51 RAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHF 110
R HS S+T+FG VGDG T NTKAFQ+A+ +L+ YA +GG++L+VPAG+WLTGSF L SH
Sbjct: 78 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSYADKGGAKLFVPAGRWLTGSFDLISHL 137
Query: 111 TLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTI 170
TL+LDK+AV+L S + +WPV+ PLPSYGRGR+ P GR+ SLI+G NLTDVI+TG+NGTI
Sbjct: 138 TLWLDKDAVILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNNGTI 197
Query: 171 DGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGI 230
DGQG+ WW +F K L +TRP+L+EL+ S + ISN T LNSP W +HPVY SN+ V+ +
Sbjct: 198 DGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTVQNV 257
Query: 231 TIIAPVTSPNTDGINPDSCTNVKIEDCY 258
TII P SPNTDGI+PDS NV IEDCY
Sbjct: 258 TIIVPFGSPNTDGIDPDSSDNVCIEDCY 285
>Medtr7g110710.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45367344-45371719 | 20130731
Length = 466
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 164/208 (78%)
Query: 51 RAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHF 110
R HS S+T+FG VGDG T NTKAFQ+A+ +L+ ++ +GG++L+VPAG+WLTGSF L SH
Sbjct: 39 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 111 TLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTI 170
TL+LDK+A++L S + +WPV+ PLPSYGRGR+ P GR+ SLI+G NLTDVI+TG+ G I
Sbjct: 99 TLWLDKDAIILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNEGII 158
Query: 171 DGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGI 230
DGQG+ WW F K L YTRP+L+ELM S + ISNLT LNSP W +HPVY S + V+ +
Sbjct: 159 DGQGSIWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNV 218
Query: 231 TIIAPVTSPNTDGINPDSCTNVKIEDCY 258
TI+AP+ SPNTDGI+PDS +V IEDCY
Sbjct: 219 TILAPLDSPNTDGIDPDSSDDVCIEDCY 246
>Medtr7g110710.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45367344-45371719 | 20130731
Length = 466
Score = 285 bits (729), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 164/208 (78%)
Query: 51 RAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHF 110
R HS S+T+FG VGDG T NTKAFQ+A+ +L+ ++ +GG++L+VPAG+WLTGSF L SH
Sbjct: 39 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 111 TLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTI 170
TL+LDK+A++L S + +WPV+ PLPSYGRGR+ P GR+ SLI+G NLTDVI+TG+ G I
Sbjct: 99 TLWLDKDAIILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNEGII 158
Query: 171 DGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGI 230
DGQG+ WW F K L YTRP+L+ELM S + ISNLT LNSP W +HPVY S + V+ +
Sbjct: 159 DGQGSIWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNV 218
Query: 231 TIIAPVTSPNTDGINPDSCTNVKIEDCY 258
TI+AP+ SPNTDGI+PDS +V IEDCY
Sbjct: 219 TILAPLDSPNTDGIDPDSSDDVCIEDCY 246
>Medtr3g449590.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr3:16895715-16889169 | 20130731
Length = 451
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 155/208 (74%)
Query: 51 RAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHF 110
RA + S+TDFGGVGDGKT N+KAF++A+ + +GG+ LYVP G +LT SF+LTSH
Sbjct: 43 RADTISITDFGGVGDGKTLNSKAFRAAIYRIQHLRRRGGTLLYVPPGVYLTESFNLTSHM 102
Query: 111 TLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTI 170
TLYL AV+ A+Q + WP++ PLPSYGRGR+ P GRY S I G + DVI+TG+NGTI
Sbjct: 103 TLYLAAGAVIKATQRLRNWPLIAPLPSYGRGRELPGGRYISFIHGDGVRDVIITGENGTI 162
Query: 171 DGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGI 230
DGQG WW + ++ L++TRP L+E + S +I ISN+ NSP WN+HPVY SN++V+ +
Sbjct: 163 DGQGDVWWNMWRQRTLQFTRPNLVEFLNSRNIIISNVIFKNSPFWNIHPVYCSNVVVRYV 222
Query: 231 TIIAPVTSPNTDGINPDSCTNVKIEDCY 258
TI+AP SPNTDGI+PDS +NV IED Y
Sbjct: 223 TILAPRDSPNTDGIDPDSSSNVCIEDSY 250
>Medtr2g435340.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:13610605-13606670 | 20130731
Length = 452
Score = 254 bits (650), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 153/208 (73%)
Query: 51 RAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHF 110
R HS S+ +FG VGDGKT NT AFQ+A+ +L +A +GG+QLYVP G WLTGSF+LTSH
Sbjct: 33 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGNWLTGSFNLTSHL 92
Query: 111 TLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTI 170
TL+L+K AV++ SQD + W ++ LPSYGRG+D P GRY SLI G L DV++TG+NGTI
Sbjct: 93 TLFLEKGAVIIGSQDPSHWNIIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITGNNGTI 152
Query: 171 DGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGI 230
DG G WW + L ++RP+L+E++ SD + +SNLT LN+P +++HPVY SN+ ++ I
Sbjct: 153 DGNGMVWWDSYKSHSLNHSRPHLVEIISSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNI 212
Query: 231 TIIAPVTSPNTDGINPDSCTNVKIEDCY 258
+I P SP T GI PDS NV IEDC+
Sbjct: 213 SISTPPESPYTAGIVPDSSNNVCIEDCF 240
>Medtr4g124980.1 | pectin lyase superfamily protein | HC |
chr4:51842179-51838098 | 20130731
Length = 492
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 158/211 (74%), Gaps = 1/211 (0%)
Query: 49 NCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTS 108
N R +LTDFGGVGDG T NT+AF+ AVS +S++ +GG+QL VP G+WLT F+LTS
Sbjct: 68 NMRPVVFNLTDFGGVGDGVTLNTEAFERAVSAISKFGKKGGAQLNVPPGRWLTAPFNLTS 127
Query: 109 HFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNG 168
H TL+L ++AV+LA D WP++ PLPSYG GR+ P RY SLI G NL DV++TG NG
Sbjct: 128 HITLFLAQDAVILAIDDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDVVITGHNG 187
Query: 169 TIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVK 228
TI+GQG WW++F +K+L YTR L+++M+S I I+++TL +SP W +HP N+ +K
Sbjct: 188 TINGQGQAWWKKFRQKRLNYTRGPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIK 247
Query: 229 GITIIAPV-TSPNTDGINPDSCTNVKIEDCY 258
G+TI+APV +PNTDGI+PDSC ++ IEDCY
Sbjct: 248 GVTILAPVFEAPNTDGIDPDSCEDMLIEDCY 278
>Medtr4g120730.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr4:49981535-49985560 | 20130731
Length = 459
Score = 251 bits (642), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 150/207 (72%)
Query: 51 RAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHF 110
R HS S+ +FG VGDGKT NT AFQ+A+ +L +A +GG+QLYVP G WLT SF+LTSH
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLTSHL 95
Query: 111 TLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTI 170
TL+L+K AV++ SQD W VL PLPSYGRG + P GRY SLI G L DV++TG+NGTI
Sbjct: 96 TLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVITGNNGTI 155
Query: 171 DGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGI 230
DG G+ WW+ F L Y+RP+L+EL+ S + +SNLT LN+P +N+HPVY N+ + I
Sbjct: 156 DGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNIHPVYCRNVHIHNI 215
Query: 231 TIIAPVTSPNTDGINPDSCTNVKIEDC 257
+I AP SP T GI PDS +V IEDC
Sbjct: 216 SIFAPPESPYTVGIVPDSSDHVCIEDC 242
>Medtr3g096330.1 | glycoside hydrolase family 28 protein | HC |
chr3:44026955-44022720 | 20130731
Length = 775
Score = 246 bits (628), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 165/219 (75%)
Query: 40 TTSFEYSAINCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKW 99
T S ++ + R S+ DFGGVGDGKTSNT++FQ A+ ++ ++ +GGSQL +P G W
Sbjct: 61 TCSGFFNNVPPRKIIKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTW 120
Query: 100 LTGSFSLTSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLT 159
LTGSF+LTS FTL+L AV+L SQDI EWP++ PLPSYGRGR+ GR+ SLI +
Sbjct: 121 LTGSFNLTSDFTLFLHHGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVR 180
Query: 160 DVIVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHP 219
+V++TG+NGT+DGQG WW+ + + L +TR +L+ELM S+++ +SNLT NSP W +HP
Sbjct: 181 NVVITGENGTVDGQGRMWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHP 240
Query: 220 VYSSNIIVKGITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
VY SN+++KG+TI+AP+ +PNTDGI+PDS TNV IED Y
Sbjct: 241 VYCSNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNY 279
>Medtr2g042740.1 | pectin lyase superfamily protein | HC |
chr2:18636698-18641564 | 20130731
Length = 474
Score = 244 bits (622), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 156/222 (70%), Gaps = 1/222 (0%)
Query: 38 IVTTSFEYSAINCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAG 97
++ + A R +LTDFGGVGDG T NTKAF+ AVS +S++ +QGG+QL VP G
Sbjct: 39 VLGEELNWEAPKLRPVVFNLTDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPG 98
Query: 98 KWLTGSFSLTSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTN 157
WLT F+LTS TL+L ++AV+LA QD WP++ LPSYG GR+ P RY+SLI G N
Sbjct: 99 FWLTSPFNLTSRMTLFLARDAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQN 158
Query: 158 LTDVIVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNV 217
L DV++TG NGTI+GQG WW + K L YTR L+++M+S I ISN+TL +SP W +
Sbjct: 159 LKDVVITGHNGTINGQGQTWWTKHLHKLLNYTRGPLVQIMYSSDIVISNITLRDSPFWTL 218
Query: 218 HPVYSSNIIVKGITIIAPV-TSPNTDGINPDSCTNVKIEDCY 258
HP N+ +K +TI+APV +PNTDGI+PDSC ++ IEDCY
Sbjct: 219 HPYDCKNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCY 260
>Medtr5g090160.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr5:39275416-39270733 | 20130731
Length = 450
Score = 227 bits (579), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 154/211 (72%), Gaps = 5/211 (2%)
Query: 51 RAHSASLTDFGGVGDGKTSNTKAFQSAV---SHLSQYASQGGSQLYVPAGKWLTGSFSLT 107
R + SLTDFGGVGDG T NTKAF+ A+ +HLSQ +GG+ LYVP G +LT F+LT
Sbjct: 40 RTDNISLTDFGGVGDGHTLNTKAFREAIYRINHLSQ--REGGTTLYVPPGVYLTEPFNLT 97
Query: 108 SHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDN 167
SH TL+L AV+ A+QD + WP++ PLPSYGRGR+ P GRY S I G L DV++TG+N
Sbjct: 98 SHMTLHLAAGAVIKATQDSSNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 157
Query: 168 GTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIV 227
GTIDGQG WW + ++ L++TRP L+E + S I ISN+ +SP WN+HPVY SN+++
Sbjct: 158 GTIDGQGDVWWNMWRKRTLQFTRPNLVEFVNSKDIIISNVIFKDSPFWNIHPVYCSNVVI 217
Query: 228 KGITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
+ TI+AP SPNTDGI+PDS +NV IED Y
Sbjct: 218 RFATILAPRDSPNTDGIDPDSSSNVCIEDSY 248
>Medtr2g083670.1 | pectin lyase superfamily protein | HC |
chr2:35113079-35111056 | 20130731
Length = 236
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 154/234 (65%), Gaps = 18/234 (7%)
Query: 28 SERGESRKAKIVTTSFEYSAIN---CRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQY 84
++R +S+ + V ++ IN R HS S+T+FG VGD T NTKAFQ+A+ +L Y
Sbjct: 10 NQRLDSKDSWTVWSNSSCKLINIKEVRPHSVSITEFGAVGDWITLNTKAFQNAIFYLKLY 69
Query: 85 ASQGGSQLYVPAGKWLTGSFSLTSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDA 144
A +GG++L+VPAG+W TGSF L SH TL LDK+AV+L S + +WPV+ P PSYGRGR+
Sbjct: 70 ADKGGAKLFVPAGRWFTGSFDLISHLTLLLDKDAVILGSTNPGDWPVVDPPPSYGRGREL 129
Query: 145 PAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQI 204
P G + SLI+G NLTDVI+TG+NGTIDGQ + WW IE M S ++ I
Sbjct: 130 PGGWHRSLIYGCNLTDVIITGNNGTIDGQRSIWW---------------IESMNSKNVLI 174
Query: 205 SNLTLLNSPNWNVHPVYSSNIIVKGITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
SN+T LNSP W +H VY S++ V+ +TI+AP PNTDGI+ S ++ Y
Sbjct: 175 SNVTFLNSPFWTMHHVYCSHVTVQNVTILAPFGLPNTDGIDSYSLIMYALKTGY 228
>Medtr1g086030.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38486723-38484669 | 20130731
Length = 406
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 112/150 (74%)
Query: 109 HFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNG 168
H+ + + AVL Q+ +WPV+ PLPSYGRGR+ P GR+ SLI+G NLTDVI+TG+NG
Sbjct: 32 HYDIVCETNAVLCLLQNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNNG 91
Query: 169 TIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVK 228
TIDGQG+ WW +F K L +TRP+L+EL+ S + ISN T LNSP W +HPVY SN+ V+
Sbjct: 92 TIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTVQ 151
Query: 229 GITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
+TII P SPNTDGI+PDS NV IEDCY
Sbjct: 152 NVTIIVPFGSPNTDGIDPDSSDNVCIEDCY 181
>Medtr2g435340.3 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:13610594-13606829 | 20130731
Length = 387
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 95/135 (70%)
Query: 124 QDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQQFHR 183
+D + W ++ LPSYGRG+D P GRY SLI G L DV++TG+NGTIDG G WW +
Sbjct: 41 KDPSHWNIIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITGNNGTIDGNGMVWWDSYKS 100
Query: 184 KKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGITIIAPVTSPNTDG 243
L ++RP+L+E++ SD + +SNLT LN+P +++HPVY SN+ ++ I+I P SP T G
Sbjct: 101 HSLNHSRPHLVEIISSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNISISTPPESPYTAG 160
Query: 244 INPDSCTNVKIEDCY 258
I PDS NV IEDC+
Sbjct: 161 IVPDSSNNVCIEDCF 175
>Medtr2g435340.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:13610594-13606829 | 20130731
Length = 387
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 95/135 (70%)
Query: 124 QDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQQFHR 183
+D + W ++ LPSYGRG+D P GRY SLI G L DV++TG+NGTIDG G WW +
Sbjct: 41 KDPSHWNIIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITGNNGTIDGNGMVWWDSYKS 100
Query: 184 KKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGITIIAPVTSPNTDG 243
L ++RP+L+E++ SD + +SNLT LN+P +++HPVY SN+ ++ I+I P SP T G
Sbjct: 101 HSLNHSRPHLVEIISSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNISISTPPESPYTAG 160
Query: 244 INPDSCTNVKIEDCY 258
I PDS NV IEDC+
Sbjct: 161 IVPDSSNNVCIEDCF 175
>Medtr2g042750.1 | hypothetical protein | LC |
chr2:18643705-18646214 | 20130731
Length = 294
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 91/162 (56%), Gaps = 30/162 (18%)
Query: 88 GGSQLYVPAGKWLTGSFSLTSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAG 147
GG+QL VP G WLT F+LTSH + + + + D WP++ LPSYG GR+ P
Sbjct: 148 GGAQLNVPPGLWLTAPFNLTSHMSKCMKTYSKI---NDEKYWPLMPALPSYGYGREHPGP 204
Query: 148 RYTSLIFGTNLTDV--IVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQIS 205
RY+SLI G NLT+V + NGTIDGQG WW ++ + L +TR L+++M+S
Sbjct: 205 RYSSLIHGQNLTEVRIFLPWHNGTIDGQGRTWWTKYRQNLLNHTRGPLVQIMWSKR---- 260
Query: 206 NLTLLNSPNWNVHPVYSSNIIVKGITIIAPV-TSPNTDGINP 246
YS N +TI+AP+ +PNTDGI+P
Sbjct: 261 ---------------YSKN-----VTILAPLDDAPNTDGIDP 282
>Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr5:19058555-19056081 | 20130731
Length = 400
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 21/201 (10%)
Query: 60 FGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGK-WLTGSFSL---TSHFTLYLD 115
+G GDG T ++ AF A + + +QG L +P GK ++ S T+ ++
Sbjct: 34 YGANGDGNTDDSNAFVKAWNDVCG-TTQGTPTLIIPEGKTFMLQPLSFQGPCKSTTIQVE 92
Query: 116 KEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 175
+ + A +DI W + +D + S + + + + V G+ GTIDGQGA
Sbjct: 93 VKGTITAPKDIEAW----------KWKD---NKRRSWVQFSKINGLAVYGE-GTIDGQGA 138
Query: 176 FWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGITIIAP 235
WW+++H RP + + +S+ ISNL +NSP ++ N + + IIAP
Sbjct: 139 PWWKKYHDGD--SNRPTAFQFIGCESLTISNLNHINSPRNHISIDSCKNASISNLQIIAP 196
Query: 236 VTSPNTDGINPDSCTNVKIED 256
SPNTDGI+ S +N+ I +
Sbjct: 197 ENSPNTDGIDIASSSNIIINN 217
>Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 |
20130731
Length = 400
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 54 SASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGK-------WLTGSFSL 106
S ++ D+G VG+GK T+AF A + A S L +P GK W G +
Sbjct: 29 SFNVLDYGAVGNGKNDETRAFVDAWKD-TCIAMHESSTLLIPKGKTFMLQPVWFQGPCNS 87
Query: 107 TSHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGD 166
++ +Y+ E ++A ++I W P+ D G + I ++ +IV G
Sbjct: 88 SN---IYVKLEGTIIAPKNIEAWK----WPN-----DNYKGSWIRFI---EISGLIVYG- 131
Query: 167 NGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNII 226
G IDG+GA WW K + P + +++ + LT +NSP ++
Sbjct: 132 GGIIDGKGAQWWDCHSNIKCEKENPTALHFHACENLILRELTHINSPRNHISLNACHGSH 191
Query: 227 VKGITIIAPVTSPNTDGINPDSCTNVKIED 256
+ + IIAP SPNTDGI+ +N+ IE+
Sbjct: 192 ISKLHIIAPNESPNTDGIDIAESSNIIIEN 221
>Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38089185-38091032 | 20130731
Length = 391
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 54 SASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLT---GSF-SLTSH 109
S ++ ++G GD T ++ AF A + ++QG L +P GK SF
Sbjct: 23 SFNVVNYGAKGDSNTDDSNAFLKAWQEVCG-STQGTPTLIIPGGKKFMLQPSSFQGPCKS 81
Query: 110 FTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGT 169
T+ + ++A Q +W RD A S I G +I++G+ GT
Sbjct: 82 STVKVMMMGTIIAPQSSGKWKW--------DSRDDDAWISFSHIKG-----LIISGE-GT 127
Query: 170 IDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKG 229
DGQGA WW+ ++ + RP ++ + D++++ L ++SP ++ V + ++
Sbjct: 128 FDGQGASWWKNYN----DHGRPTALQFLGCDNLKLGPLRHIDSPKNHISIVDCNGALISH 183
Query: 230 ITIIAPVTSPNTDGINPDSCTNVKIE 255
+ IIAP SPNTDGI+ TN+ IE
Sbjct: 184 LHIIAPENSPNTDGIDISRSTNIIIE 209
>Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38095209-38097944 | 20130731
Length = 396
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 60 FGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSL--------TSHFT 111
+G +GDG+T ++ AF + S+ + +P GK +F L
Sbjct: 26 YGAIGDGQTDDSNAFLKVFNDACG-TSESTPSMTIPEGK----TFLLQPLVFKGPCKSTN 80
Query: 112 LYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTID 171
+ ++ + + A +DI W R + F + ++ ++V G+ G ID
Sbjct: 81 IIVELKGNITAPKDIESWNFT-----------VEKQRKIWIQF-SKISGLVVNGE-GNID 127
Query: 172 GQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGIT 231
GQG+ WW +F K + RP + + ++ +SNL +NSP ++ N + I
Sbjct: 128 GQGSPWWDKFGGKGQEKFRPTALRFLDCQALTLSNLNHMNSPKNHISVDSCKNASIFNIH 187
Query: 232 IIAPVTSPNTDGINPDSCTNVKI 254
I AP TSPNTDGI+ TN+ I
Sbjct: 188 ITAPPTSPNTDGIDISQSTNIAI 210
>Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 425
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 39/233 (16%)
Query: 27 SSERGES-RKAKIVTTSFEYSAINCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYA 85
S+ RG S RK K +++F ++ DFG GDG + +TKAF+ A + +
Sbjct: 28 SATRGHSWRKLKATSSTF------------NVLDFGAKGDGHSDDTKAFEDAWAAACKME 75
Query: 86 SQGGSQLYVPAGK-WLTGSFSLT---SHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRG 141
+ S + VP+G +L S + + + ++A + W
Sbjct: 76 A---STMVVPSGSVFLVKPISFSGPNCEPNIVFQLDGKIIAPTSPSAWG----------- 121
Query: 142 RDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDS 201
+G L F T L + + G G IDGQG+ WW +KL T+P + SD
Sbjct: 122 ----SGTLQWLEF-TKLNKITIKG-KGVIDGQGSVWWND--SEKLPKTKPTALRFYGSDG 173
Query: 202 IQISNLTLLNSPNWNVHPVYSSNIIVKGITIIAPVTSPNTDGINPDSCTNVKI 254
+ +S +T+ NS ++ +N+ V IT +P SPNTDGI+ + +V I
Sbjct: 174 VSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVI 226
>Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 402
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 39/233 (16%)
Query: 27 SSERGES-RKAKIVTTSFEYSAINCRAHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYA 85
S+ RG S RK K +++F ++ DFG GDG + +TKAF+ A + +
Sbjct: 28 SATRGHSWRKLKATSSTF------------NVLDFGAKGDGHSDDTKAFEDAWAAACKME 75
Query: 86 SQGGSQLYVPAGK-WLTGSFSLT---SHFTLYLDKEAVLLASQDITEWPVLGPLPSYGRG 141
+ S + VP+G +L S + + + ++A + W
Sbjct: 76 A---STMVVPSGSVFLVKPISFSGPNCEPNIVFQLDGKIIAPTSPSAWG----------- 121
Query: 142 RDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDS 201
+G L F T L + + G G IDGQG+ WW +KL T+P + SD
Sbjct: 122 ----SGTLQWLEF-TKLNKITIKG-KGVIDGQGSVWWND--SEKLPKTKPTALRFYGSDG 173
Query: 202 IQISNLTLLNSPNWNVHPVYSSNIIVKGITIIAPVTSPNTDGINPDSCTNVKI 254
+ +S +T+ NS ++ +N+ V IT +P SPNTDGI+ + +V I
Sbjct: 174 VSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVI 226
>Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:21549576-21552288 | 20130731
Length = 401
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 60 FGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGK-WLTGSFSLTSHF---TLYLD 115
+G +GDG+T ++ AF A H +G + +P GK +L S T+ ++
Sbjct: 35 YGAIGDGQTDDSNAFLKAF-HDVCGTIEGTRTMTIPNGKTFLLQPLSFNGPCKPGTITIE 93
Query: 116 KEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 175
+ + A +D+ W + R I + + D+IV G G IDGQG+
Sbjct: 94 IKGSITAPKDVKLWKF-------------SSDRKNVWIRFSEINDLIVNG-KGDIDGQGS 139
Query: 176 FWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGITIIAP 235
WW ++ + RP ++ + +++++LT NSP ++ + + IIA
Sbjct: 140 SWWLRYPGDQ---DRPTALQFLGCQDLKLNDLTHRNSPRNHISIDTCKGAFISNLHIIAA 196
Query: 236 VTSPNTDGINPDSCTNVKIEDCY 258
TSPNTDGI+ +NV I + +
Sbjct: 197 PTSPNTDGIDISQSSNVFITNSF 219
>Medtr7g092470.1 | exo-polyalpha-D-galacturonosidase-like protein |
HC | chr7:36655367-36649364 | 20130731
Length = 482
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 36/219 (16%)
Query: 56 SLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPA-GKWLTGSFSLTSHFTLYL 114
S+T++G +GDG +T + Q+A+ ++ P+ G +LT + L S L +
Sbjct: 49 SVTEYGAIGDGIHYDTVSIQTAIDSCPYSIP---CRITFPSPGNYLTATIFLRSGVVLNV 105
Query: 115 DKEAVLLASQDITEWPVLGPLPSYGRGRDAP--AGRYTSLIFGTNLTDVIVTGDNGTIDG 172
+ A +L GP R +D P + R+ ++ N TDV + G G +DG
Sbjct: 106 EPGATILG----------GP-----RQKDYPKESSRWY-VVLAENATDVGIAG-GGVVDG 148
Query: 173 QGAFWWQQFHRKKL-------------KYTRPYLIELMFSDSIQISNLTLLNSPNWNVHP 219
Q + +++ +K RP LI + ++++ N+TL W +H
Sbjct: 149 QAEKFVVRYNERKNVMVSWNQTGDCLGDECRPRLIGFLGCKNVKVFNVTLNQPAYWCLHL 208
Query: 220 VYSSNIIVKGITIIAPVTSPNTDGINPDSCTNVKIEDCY 258
V S NI ++ I I + PN DGI+ + N I C+
Sbjct: 209 VRSENITIQDIAIYGDLNIPNNDGIDIEDSNNTVITRCH 247
>Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-14516292 |
20130731
Length = 470
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 57 LTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAG-KWLTGSFSLTSHFT--LY 113
+ FG G+G + +++AF +A + + G+ + VP K+L +L L
Sbjct: 61 IMSFGAKGNGVSDDSEAFLAAWKCACKVS---GATIKVPEKLKFLIKPITLQGPCMPDLT 117
Query: 114 LDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 173
L + +LA +++ WP + ++ + + N T + G GTIDGQ
Sbjct: 118 LQIDGTILAPPEVSSWP------------KSNLFQWINFKWVQNFT---IKG-YGTIDGQ 161
Query: 174 GAFWW--------QQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNI 225
G+ WW Q+ H K++ +P I S+ ++I ++ + NSP ++ S I
Sbjct: 162 GSNWWSSSKLYDIQKTHSKQIPSMKPTAIRFYSSNFVKIRDIKIKNSPLCHLKFDNSKGI 221
Query: 226 IVKGITIIAPVTSPNTDGINPDSCTNVKIE 255
V ITI +P SPNTDGI+ + +V+I+
Sbjct: 222 KVDNITISSPENSPNTDGIHLQNTQDVEIQ 251
>Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-32731175 |
20130731
Length = 394
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 56 SLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGK-WLTGSFSL---TSHFT 111
++ +G GDG T ++ AF +A + +++ L +P G+ ++ S T
Sbjct: 24 NVVKYGAKGDGHTDDSNAFTNAWQDVCG-STRDTPTLIIPEGQNFMLQPLSFQGPCKSTT 82
Query: 112 LYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTID 171
+ + + A Q W D G Y I +N+ +I+ G GT+D
Sbjct: 83 ISVKIMGTITAPQSNANWK-----------WDDNDGDY--WIKFSNINGLIING-GGTVD 128
Query: 172 GQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGIT 231
GQG WW + RP ++++ D++++ L +NSP ++ V ++ ++ +
Sbjct: 129 GQGDSWWNNN-----GHIRPTALKILECDNLKLGPLKHINSPRNHISIVGCNDALISNLH 183
Query: 232 IIAPVTSPNTDGINPDSCTNVKIE 255
IIAP SPNTDGI+ + TN+ ++
Sbjct: 184 IIAPKDSPNTDGIDISTSTNISVQ 207
>Medtr7g091840.1 | endo polygalacturonase | HC |
chr7:36349369-36347147 | 20130731
Length = 384
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 26/206 (12%)
Query: 56 SLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWL----TGSFSLTSHFT 111
+++D+G GDGKT +T+AF+ A + +S GG ++V + FS
Sbjct: 66 NVSDYGAKGDGKTDDTQAFEKAWEAVC--SSGGGEAVFVAPQDNIYLLKPIRFSGPCKSK 123
Query: 112 LYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTID 171
+ VL+AS + +++ G + L+F + ++V G GT+D
Sbjct: 124 ISFQISGVLIASNNPSDY-------------SKDPGHW--LVFA-KVQQLVVNG-GGTLD 166
Query: 172 GQGAFWWQQ-FHRKKLKYTRPYLIELMFS--DSIQISNLTLLNSPNWNVHPVYSSNIIVK 228
G+G WW+ R K K + L F+ + + + NL + N+ ++ S N+
Sbjct: 167 GKGTIWWENSCKRNKNKPCKDAPTALTFANCEDLIVENLKIRNAQQIHISFQDSVNVTAS 226
Query: 229 GITIIAPVTSPNTDGINPDSCTNVKI 254
G+ + +P SPNTDGI+ + N+KI
Sbjct: 227 GLIVASPEDSPNTDGIHVTNTQNIKI 252
>Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 |
20130731
Length = 397
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 23/202 (11%)
Query: 60 FGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHFTLYLDKEAV 119
+G GDG + +T+AF A L A+QG L VPA T ++ ++A
Sbjct: 33 YGAKGDGTSDDTQAFLEAWKALCA-ANQGTPTLVVPA------------EHTFFV-RQAT 78
Query: 120 L---LASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAF 176
SQ++ ++G + RDA ++ N+ + V G +G IDG+G
Sbjct: 79 FQGPCKSQNL-HIQIMGNI--IAPHRDAWGSCSKRWLYFLNVHGMTVDG-SGVIDGRGEA 134
Query: 177 WWQQFHRKK--LKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGITIIA 234
WW + K RP + D +Q+S LT +N P +V+ V+S ++ + I I +
Sbjct: 135 WWSNLNGTKGCAANARPTALLFERCDGLQLSGLTHINGPAMHVYVVHSQDVTISHINISS 194
Query: 235 PVTSPNTDGINPDSCTNVKIED 256
S NTDGI+ + V I D
Sbjct: 195 SKDSYNTDGIDISNSIRVNIHD 216
>Medtr2g049400.1 | pectin lyase superfamily protein | LC |
chr2:21772816-21776116 | 20130731
Length = 391
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 33/211 (15%)
Query: 52 AHSASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHFT 111
A S ++ FG DG +TK F SA S + S S +YVP G +L
Sbjct: 25 AASINVASFGAKSDGTQDSTKPFLSAWSLACK--SNEASTIYVPQGSFLL---------- 72
Query: 112 LYLDKEAVLLASQDITEW-PVLGPLPSYGRGRDAPAGRYTSL------IFGTNLTDVIVT 164
+ ++ W P L + G +Y SL I + V +
Sbjct: 73 ------------KQVSFWGPCLNKIDFKIDGTIVAPSKYESLGNSGYWILFMKVNWVSIY 120
Query: 165 GDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSN 224
G GT DG+GA +W+ + I +S ++ +S LT LNS ++ + N
Sbjct: 121 G--GTFDGKGAGYWRCRKAGRSCPAAARSISFSWSKNVLVSGLTSLNSKAIHIAVDHCKN 178
Query: 225 IIVKGITIIAPVTSPNTDGINPDSCTNVKIE 255
+++K + I AP SPNTDGIN T V I
Sbjct: 179 VVIKDVKIRAPSRSPNTDGINVQFSTGVTIS 209
>Medtr8g065030.1 | pectin lyase superfamily protein | HC |
chr8:27313786-27310073 | 20130731
Length = 461
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 56 SLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGK-WLTGS--FSLTSHFTL 112
++ FG G+G+T +T+A Q A S S L +P G+ +L + F L
Sbjct: 66 NIDSFGAAGNGETDDTEALQKA---WGVACSTPKSVLLIPKGRRYLVNATKFIGPCKDNL 122
Query: 113 YLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDG 172
+ + L+A +D W P L F + L + G +G IDG
Sbjct: 123 IIQIDGTLVAPEDPKNWD--------------PKLPRVWLDF-SKLKKAVFQG-SGVIDG 166
Query: 173 QGAFWWQQFHRKKLK---YTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKG 229
G+ WW +K P + + S SI++ LT+ NS + ++ + G
Sbjct: 167 SGSKWWAASCKKNKTNPCKGAPTALTIDTSSSIKVKGLTIQNSQQMHFTISRCDSVRILG 226
Query: 230 ITIIAPVTSPNTDGINPDSCTNVKIEDC 257
+ + +P SPNTDGI+ TNV ++DC
Sbjct: 227 VKVASPGDSPNTDGIHISESTNVIVQDC 254
>Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 |
20130731
Length = 388
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 56 SLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHFTLYLD 115
++ +G GDGK+ ++KAF SA S S + G S L +P ++ HF+
Sbjct: 32 NVMQYGARGDGKSDDSKAFFSAWS--SACKAVGTSTLVIPGKIFMASKI----HFSGPCS 85
Query: 116 KEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 175
+ ++ I + P + RG + ++ + LT I G++ G G
Sbjct: 86 AKILIQLKGKI-----VAPSKAAWRG----GSEWINVEYVNGLT--IDGNGEGSVLGDGP 134
Query: 176 FWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGITIIAP 235
WWQ + +RP ++ + + + NL +LNSP +V ++ I+I +P
Sbjct: 135 TWWQC-----PRCSRPTMLHFHSCNDLNVRNLRILNSPRSHVSVNMCNHATFSYISISSP 189
Query: 236 VTSPNTDGINPDSCTNVKIED 256
TSPNTDG + N+ I+D
Sbjct: 190 ATSPNTDGFDISHSNNILIQD 210
>Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 |
20130731
Length = 346
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 56 SLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGS---FSLTSHFTL 112
++ +G GDGKT +++AF +A + S + G S L +PAGK S FS + +
Sbjct: 32 NVMQYGAHGDGKTDDSQAFINAFN--SACKATGMSTLVIPAGKTFMVSKVIFSGRCNAKV 89
Query: 113 YLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDG 172
+ E ++A PS + + ++ + LT I G +DG
Sbjct: 90 RIQLEGQIVA-------------PS--KANSKAQSYWFTIEYVNGLT--IDGNGQGGLDG 132
Query: 173 QGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGITI 232
G+ WW+ RP + + + +SNL + NSP+ +V + ++I
Sbjct: 133 DGSTWWESGGE------RPGALLFHSCNDLSVSNLRITNSPSSHVSINMCNRTTFSHVSI 186
Query: 233 IAPVTSPNTDGINPDSCTNVKIED 256
+P TSPNTDG + T+++IE+
Sbjct: 187 NSPATSPNTDGFDISFSTDIRIEN 210
>Medtr1g052315.1 | endo polygalacturonase | HC |
chr1:21186740-21183250 | 20130731
Length = 449
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 40/214 (18%)
Query: 56 SLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHF---TL 112
++ +G GDGKT +TKAF+ S GS + + +L + + ++
Sbjct: 65 NVDQYGAQGDGKTDDTKAFKKV---WQVACSSKGSVVVLAQKNYLVKPITFSGPCKSKSI 121
Query: 113 YLDKEAVLLAS-------QDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTG 165
+ L+AS QD T W L+F + + + V G
Sbjct: 122 VVQISGSLVASDNPSDYKQDPTHW----------------------LMFDS-VQKLSVKG 158
Query: 166 DNGTIDGQGAFWWQQFHR--KKLKYTR-PYLIELMFSDSIQISNLTLLNSPNWNVHPVYS 222
GTI G G WWQ + KKL P + L +++ + +L + N +V S
Sbjct: 159 -GGTIHGNGNIWWQNSCKTNKKLPCKEAPTALTLYKCNNLVVEDLNVKNGQQIHVQFQNS 217
Query: 223 SNIIVKGITIIAPVTSPNTDGINPDSCTNVKIED 256
+N+ V G+T+ AP SPNTDGI+ + N++I +
Sbjct: 218 ANVRVSGLTVTAPEDSPNTDGIHVTNTQNIQISN 251
>Medtr7g091850.1 | endo polygalacturonase | HC |
chr7:36360735-36353948 | 20130731
Length = 450
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 32/209 (15%)
Query: 55 ASLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAG-----KWLTGSFSLTSH 109
++ D+G GDG T +T+AF+ A S G S L P K + S S+
Sbjct: 76 VNVRDYGAKGDGHTDDTQAFKKA---WEVVCSSGQSVLVAPQDYNYLLKPIRFSGPCKSN 132
Query: 110 FTLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGT 169
++ + G L + D + L+F + ++V G GT
Sbjct: 133 ISVQIS-----------------GSLEASDNPSDYSEDQRHWLVF-VEVQQLLVNG-GGT 173
Query: 170 IDGQGAFWWQQ-FHRKKLKYTRPYLIELMFSDSIQ---ISNLTLLNSPNWNVHPVYSSNI 225
IDG+G WW+ R K K + L F DS + + +LT+ N+ +V S+N+
Sbjct: 174 IDGKGNIWWENSCKRNKKKPCKDAPTALTF-DSCKDLIVEDLTIQNAQQIHVSFQDSTNV 232
Query: 226 IVKGITIIAPVTSPNTDGINPDSCTNVKI 254
G+ + +P SPNTDGI+ + N+KI
Sbjct: 233 KASGLKVSSPGNSPNTDGIHITNTQNIKI 261
>Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:44629212-44625414 | 20130731
Length = 404
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 60 FGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGK-WLTGSFSLTSHFT---LYLD 115
+G VGDGKT+++ AF A + S G S+L +PA K +L + +Y++
Sbjct: 33 YGAVGDGKTNDSPAFLKAWKDVCNSKS-GTSRLIIPAAKTFLLRPIAFRGPCKSNYIYIE 91
Query: 116 KEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 175
++A + +E+ +G + G + + ++ GT+DG+G+
Sbjct: 92 LSGNIIAPKTKSEY----------------SGSPINTWIGFSFVNGLIISGKGTVDGRGS 135
Query: 176 FWWQQ----FHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKGIT 231
WW+Q P I L QI T +N ++ I+ I
Sbjct: 136 MWWKQPCIGNPPPGTSCRPPTAITLNRCYRFQIKGYTSINPARSHITLTSCKKGIISNIR 195
Query: 232 IIAPVTSPNTDGINPDSCTNVKIEDCY 258
+IAP SPNTDGI+ + ++++ + +
Sbjct: 196 LIAPGESPNTDGIDISASRDIQVLNSF 222
>Medtr8g010050.1 | pectin lyase superfamily protein | LC |
chr8:2530574-2534406 | 20130731
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 87/214 (40%), Gaps = 46/214 (21%)
Query: 56 SLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGK-WLTGSFSLTSHFT--- 111
++ +G GDGKT +++AF SA S + A S L +P GK ++ S + T
Sbjct: 32 NVMQYGARGDGKTDDSQAFVSAWSSACKAAEM--STLVIPVGKTFMVSKLSFSGPCTNKN 89
Query: 112 LYLDKEAVLLASQD---------ITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVI 162
+ + E ++A IT V G L G GR
Sbjct: 90 ILIQLEGKIVAPSKVGWKAQSYWITVQSVEG-LTIEGNGR-------------------- 128
Query: 163 VTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYS 222
G +DG G+ WWQ RP + + +SNL++ NSP +V
Sbjct: 129 -----GVLDGDGSTWWQC-----KSCARPGVFLFHSCKGLNVSNLSITNSPRSHVAVNMC 178
Query: 223 SNIIVKGITIIAPVTSPNTDGINPDSCTNVKIED 256
+ I+I +P TSPNTDG + T++ I D
Sbjct: 179 NGATFSNISINSPGTSPNTDGFDIALSTHIVIHD 212
>Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45103855-45101037 | 20130731
Length = 462
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 33/209 (15%)
Query: 60 FGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQ---LYVPAG-KWLTGS--FSLTSHFTLY 113
FG +GDG +T++F+ A A Q GS + VP G ++ S F+ L
Sbjct: 72 FGAIGDGIEDDTESFKMAW----DTACQNGSDVNVILVPQGFSFVIQSTIFTGPCQGDLI 127
Query: 114 LDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 173
+ +LA WP R L+F + + + G +G+IDG+
Sbjct: 128 FKVDGTVLAPDGPESWP-------------KNNSRRQWLVF-YRMKGMSLEG-SGSIDGR 172
Query: 174 GAFWWQ---QFHRKKL-----KYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNI 225
G WW + H+ P I S ++ + L + NSP +N +N+
Sbjct: 173 GQKWWDLPCKPHKGSNGTALGTCDSPIAIRFFMSSNLTVKGLKVKNSPQFNFRFDACNNV 232
Query: 226 IVKGITIIAPVTSPNTDGINPDSCTNVKI 254
++ I I AP SPNTDGI+ + +VKI
Sbjct: 233 HIESIYITAPKISPNTDGIHLEYANDVKI 261
>Medtr4g094715.1 | pectin lyase superfamily protein | HC |
chr4:38832640-38835379 | 20130731
Length = 461
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 57 LTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGS--FSLTSHFTLYL 114
+T FG +GDG +T AF+ A + A + G L ++ S FS L
Sbjct: 67 VTSFGAIGDGSADDTPAFKKAWK--AACAVESGILLVPENYTFMITSIIFSGPCKPGLVF 124
Query: 115 DKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 174
+ +L+A WP R L+F L + + G GTI+G G
Sbjct: 125 QVDGMLMAPDGPDSWP-------------EADSRNQWLVF-YKLDQMSLNG-TGTIEGNG 169
Query: 175 AFWWQ---QFHRKKLKYT------RPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNI 225
WW + HR T P +I S ++ ++ L + NSP +++ +
Sbjct: 170 DQWWDLPCKPHRGPDGKTLSGPCGSPAMIRFFMSSNLYVNGLKIENSPQFHMIFNGCQGV 229
Query: 226 IVKGITIIAPVTSPNTDGINPDSCTNVKI 254
++ ++I AP SPNTDGI+ ++ +V I
Sbjct: 230 MINMLSISAPKLSPNTDGIHVENSKDVGI 258
>Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-39390473 |
20130731
Length = 407
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 57 LTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTG----SFSLTSHFTL 112
+T FG V DGKT N + ++A + ++ + L +PAG ++TG + TS +
Sbjct: 37 VTKFGAVADGKTDNVEKIRAAWQAACKTSTVPATVL-IPAGTFVTGQTLFAGPCTSPKPI 95
Query: 113 YLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDG 172
++ A+ D++E+ Y+ F D +V +G DG
Sbjct: 96 TVEIVGKAQATTDLSEY-------------------YSPEWFQFENIDGLVLKGSGVFDG 136
Query: 173 QGAFWWQQFHRKKLKYTRPYLIELMFSDSIQ---ISNLTLLNSPNWNVHPVYSSNIIVKG 229
QG+ W K+ K L + D I+ + ++T LNS ++ H SNI
Sbjct: 137 QGSISWPLNDCKQNKGNCASLPSSLKFDKIKNAIVQDVTSLNSMQFHFHLHGCSNISFTN 196
Query: 230 ITIIAPVTSPNTDGIN 245
+ I AP SPNTDG++
Sbjct: 197 LHITAPGNSPNTDGMH 212
>Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-49886301 |
20130731
Length = 422
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 33/209 (15%)
Query: 60 FGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHF----TLYLD 115
FG GDG T T+AF + + Q ++ YVPAG++L + +
Sbjct: 57 FGAKGDGVTDCTQAFMQTWQAVCKKPGQ--NRFYVPAGRFLVSEIIFAGPCLAPKPVTIQ 114
Query: 116 KEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 175
+LA+ DI+E+ GR+ +L + + G GT DGQG
Sbjct: 115 VVGTILATTDISEYA---------------NGRWFEF---QDLNGLKMLG-GGTFDGQGQ 155
Query: 176 FWWQQFHRKK-------LKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVK 228
W+ K P L ++I I + +N ++V SNI ++
Sbjct: 156 ESWKFAEDCKSGNGDTACVPNPPSLYFTKVQNAI-IMGIKSVNPKGFHVFVTQCSNIRLQ 214
Query: 229 GITIIAPVTSPNTDGINPDSCTNVKIEDC 257
+ + AP TSPNTDGI+ + VKI C
Sbjct: 215 RLRLTAPDTSPNTDGIHISTSYGVKINRC 243
>Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38659765-38662894 | 20130731
Length = 477
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 60 FGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHFTLYLDK-EA 118
FG +GDG T +T++F+ A Q + + ++VP G FS T++ +
Sbjct: 86 FGAIGDGITDDTESFKMAWDTACQ-SELDLNVIFVPPG------FSFIVQSTIFTGPCKG 138
Query: 119 VLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWW 178
L+ D T GP S+ + R L+F + + + G +GTIDG+G WW
Sbjct: 139 GLVLKVDGTIMTPDGP-ESWLKNN----SRRQWLVF-YRVNGMSLEG-SGTIDGRGQKWW 191
Query: 179 Q---QFHRKKLKYT------RPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKG 229
+ H+ T P I S ++ + L + NSP ++ ++ V+
Sbjct: 192 DLPCKPHKGPNGTTLPGPCDSPVAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCQSVHVES 251
Query: 230 ITIIAPVTSPNTDGINPDSCTNVKI 254
I I AP SPNTDGI+ ++ +VKI
Sbjct: 252 IFITAPALSPNTDGIHIENTNDVKI 276
>Medtr2g103410.2 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 333
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 168 GTIDGQGAFWWQQFHRKKLKYTRPYL---IELMF--SDSIQISNLTLLNSPNWNVHPVYS 222
G IDG G WW + K+ T P L L F S+++ NLT+LNS ++
Sbjct: 157 GRIDGMGQEWWSR--SCKINTTNPCLPAPTALTFHKCKSLKVRNLTVLNSQKMHIAFTSC 214
Query: 223 SNIIVKGITIIAPVTSPNTDGINPDSCTNVKIED 256
++ + ++AP +SPNTDGI+ + V+I D
Sbjct: 215 MRVVASRLKVLAPASSPNTDGIHISATKGVEIRD 248
>Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 451
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 168 GTIDGQGAFWWQQFHRKKLKYTRPYL---IELMF--SDSIQISNLTLLNSPNWNVHPVYS 222
G IDG G WW + K+ T P L L F S+++ NLT+LNS ++
Sbjct: 157 GRIDGMGQEWWSR--SCKINTTNPCLPAPTALTFHKCKSLKVRNLTVLNSQKMHIAFTSC 214
Query: 223 SNIIVKGITIIAPVTSPNTDGINPDSCTNVKIED 256
++ + ++AP +SPNTDGI+ + V+I D
Sbjct: 215 MRVVASRLKVLAPASSPNTDGIHISATKGVEIRD 248
>Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-32522029 |
20130731
Length = 374
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 29/205 (14%)
Query: 56 SLTDFGGVGDGKTSNTKAFQS--AVSHLSQYASQGGSQLYVPAGKWLTGSFSLTSHF--- 110
++ ++G DGKT +TKAF + A + S Y + +YVP GK+L G+ + +
Sbjct: 10 NVINYGAKPDGKTDSTKAFGNVWAKACSSPYPAS----IYVPQGKFLLGTATFSGKCINK 65
Query: 111 TLYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGDNGTI 170
+ + + L+AS + G+ + + ++ V + G G +
Sbjct: 66 AISITIDGTLVASSNYRV-----------------TGKNGNWLKFQHVDGVSIRG--GLL 106
Query: 171 DGQGAFWWQQFHRKKLKY-TRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIVKG 229
DGQG W + K +E S +I IS LT +NS +++ N+ ++G
Sbjct: 107 DGQGTALWDCKNSDKSNCPIGATTLEFSNSKNIMISGLTSMNSQMFHIVFNGCENVKMQG 166
Query: 230 ITIIAPVTSPNTDGINPDSCTNVKI 254
+ I+A SPNTDGI+ ++V I
Sbjct: 167 VNIMAAGNSPNTDGIHVQMSSHVTI 191
>Medtr2g029170.1 | endo-polygalacturonase | HC |
chr2:10881421-10882932 | 20130731
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 23/169 (13%)
Query: 90 SQLYVPAGKWLTGSFSLTSHFT---LYLDKEAVLLASQDITEWPVLGPLPSYGRGRDAPA 146
S +YVP GK+L G + T + + + L+A D + V+G +
Sbjct: 29 STIYVPHGKFLLGRVTFRGECTNKDISIIIDGTLVAPSD---YHVIGEASYW-------- 77
Query: 147 GRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMF-SDSIQIS 205
L F N++ V + G G +DG+G W + K + F SD+I I+
Sbjct: 78 -----LTF-ENVSGVKIHG--GVLDGKGTSLWDCKNSGKSCPMGAAVNTWNFNSDNIIIT 129
Query: 206 NLTLLNSPNWNVHPVYSSNIIVKGITIIAPVTSPNTDGINPDSCTNVKI 254
LT LNS +++ N+ V G+ IIAP SPNTDGI+ S +++ I
Sbjct: 130 GLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITI 178
>Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 |
20130731
Length = 390
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 83/214 (38%), Gaps = 46/214 (21%)
Query: 56 SLTDFGGVGDGKTSNTKAFQSAVSHLSQYASQGGSQLYVPAGK-WLTGSFSLTSHFT--- 111
++ +G GDGK ++ AF A + + A S L +P GK ++ S T
Sbjct: 32 NVMKYGARGDGKIDDSLAFVRAWNSACKAAEM--STLVIPVGKTFMVSKLSFNGPCTNKH 89
Query: 112 LYLDKEAVLLASQD---------ITEWPVLGPLPSYGRGRDAPAGRYTSLIFGTNLTDVI 162
+ + E ++A IT V G L G GR
Sbjct: 90 ILIQLEGKIVAPSKVHWKAQSYWITVQSVEG-LTINGHGR-------------------- 128
Query: 163 VTGDNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYS 222
G +DG G+ WWQ RP + + +SNL++ NSP +V
Sbjct: 129 -----GVLDGDGSTWWQC-----KSCDRPGVFLFHSCKGLNVSNLSITNSPRSHVAVNMC 178
Query: 223 SNIIVKGITIIAPVTSPNTDGINPDSCTNVKIED 256
+ I+I +P TSPNTDG + T++ I D
Sbjct: 179 NGATFSNISINSPGTSPNTDGFDIALSTHIVIHD 212
>Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 |
20130731
Length = 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 168 GTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPNWNVHPVYSSNIIV 227
G +DG G+ WW+ RP + + + +SNL + NSP+ +V +
Sbjct: 51 GGLDGDGSTWWESGGE------RPGALLFHSCNDLSVSNLRITNSPSSHVSINMCNRTTF 104
Query: 228 KGITIIAPVTSPNTDGINPDSCTNVKIED 256
++I +P TSPNTDG + T+++IE+
Sbjct: 105 SHVSINSPATSPNTDGFDISFSTDIRIEN 133