Miyakogusa Predicted Gene

Lj1g3v2740260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2740260.1 tr|D7KSP1|D7KSP1_ARALL Glycosyl transferase
family 1 protein OS=Arabidopsis lyrata subsp. lyrata
GN=,58.54,4e-19,seg,NULL; GLYCOSYLTRANSFERASE,NULL,CUFF.29726.1
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g112280.1 | group 1 family glycosyltransferase | HC | chr3...    94   5e-20
Medtr3g112280.2 | group 1 family glycosyltransferase | HC | chr3...    93   7e-20

>Medtr3g112280.1 | group 1 family glycosyltransferase | HC |
           chr3:52580875-52575999 | 20130731
          Length = 466

 Score = 93.6 bits (231), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/106 (67%), Positives = 79/106 (74%), Gaps = 12/106 (11%)

Query: 35  FIR-TTSDSCNA--------SQPHPEL--HVPPSPEPSLEFMKSKRVLMVSHELSLSGGP 83
           F+R   SDSCN         SQ HP    + P  P P L+FMKSK VLMVSHELSLSGGP
Sbjct: 30  FMRPNNSDSCNTTKTFEAQQSQIHPSSVGNAPAGPSP-LDFMKSKLVLMVSHELSLSGGP 88

Query: 84  LLLMELAFLLRGVGSDVVWITNQKPLQSDDIVYSLENKMLDRGVQV 129
           LLLMELAFLLRGVGSDVVWITNQ P + D ++YSLE+KMLDRGVQV
Sbjct: 89  LLLMELAFLLRGVGSDVVWITNQYPAEHDQVIYSLESKMLDRGVQV 134


>Medtr3g112280.2 | group 1 family glycosyltransferase | HC |
           chr3:52580874-52576023 | 20130731
          Length = 391

 Score = 93.2 bits (230), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/106 (67%), Positives = 79/106 (74%), Gaps = 12/106 (11%)

Query: 35  FIR-TTSDSCNA--------SQPHPEL--HVPPSPEPSLEFMKSKRVLMVSHELSLSGGP 83
           F+R   SDSCN         SQ HP    + P  P P L+FMKSK VLMVSHELSLSGGP
Sbjct: 30  FMRPNNSDSCNTTKTFEAQQSQIHPSSVGNAPAGPSP-LDFMKSKLVLMVSHELSLSGGP 88

Query: 84  LLLMELAFLLRGVGSDVVWITNQKPLQSDDIVYSLENKMLDRGVQV 129
           LLLMELAFLLRGVGSDVVWITNQ P + D ++YSLE+KMLDRGVQV
Sbjct: 89  LLLMELAFLLRGVGSDVVWITNQYPAEHDQVIYSLESKMLDRGVQV 134