Miyakogusa Predicted Gene

Lj1g3v2727080.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2727080.2 tr|G7JDB8|G7JDB8_MEDTR NBS-containing
resistance-like protein OS=Medicago truncatula
GN=MTR_4g023260,43.88,3e-19,seg,NULL,CUFF.29461.2
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g023260.1 | disease resistance protein (TIR-NBS-LRR class)...    81   3e-16
Medtr4g023040.1 | disease resistance protein (TIR-NBS-LRR class)...    80   6e-16
Medtr4g023060.1 | disease resistance protein (TIR-NBS-LRR class)...    77   5e-15

>Medtr4g023260.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | LC | chr4:7840233-7834686 | 20130731
          Length = 1352

 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 71/139 (51%), Gaps = 2/139 (1%)

Query: 1    MPIILEACHFGEAPTRRYWGKLEIQQEDPTYKAVLRKTSQLARRFWRIQGKEMMNIVXXX 60
            M IIL+      A  RRYWG LEI+  DP YK +LR+  QL+ + W  +     N     
Sbjct: 1187 MAIILKNDDMLGAKHRRYWGFLEIKFGDPFYKPLLRRLCQLSWKHWESKESSRSNKRVTV 1246

Query: 61   XXXXXXXXXXXXXXXXGHGEEEEEYYNDPVLDELMTRIEDDTMSLNKTYGILKASIVLCT 120
                               E  EE   +P LDELM+ IE D MSLN+TYG +KASIV   
Sbjct: 1247 VELKCQPPGTEEASTSSLEESWEEVNYNPELDELMSAIEQDAMSLNRTYGKMKASIV--R 1304

Query: 121  SEELVSDIYLQETVMLRGQ 139
            ++  +S+ +L E + L+GQ
Sbjct: 1305 TDRPISENHLSEGLFLKGQ 1323


>Medtr4g023040.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | HC | chr4:7755936-7751200 | 20130731
          Length = 1340

 Score = 80.5 bits (197), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 8/137 (5%)

Query: 1    MPIILEACHFGEAPTRRYWGKLEIQQEDPTYKAVLRKTSQLARRFWRIQGKEMMNIVXXX 60
            MPIIL       A  RR+WG +EI+  DP YK VL++ +QLA   W +   E+  I+   
Sbjct: 1146 MPIILGYTDASGATHRRFWGIMEIKLRDPFYKPVLKRQNQLA---WGLGTSELSVIIVEL 1202

Query: 61   XXXXXXXXXXXXXXXXGHGEEEEEYYNDPVLDELMTRIEDDTMSLNKTYGILKASIVLCT 120
                               EE    YN P L+ELM RIE D MSLNK+YG +KASIV   
Sbjct: 1203 KCQPVGTEEASSSSLEESLEEGN--YN-PDLEELMRRIEQDAMSLNKSYGKMKASIV--Q 1257

Query: 121  SEELVSDIYLQETVMLR 137
            ++E +S+ YL ET++ R
Sbjct: 1258 TDESISEKYLLETLIFR 1274


>Medtr4g023060.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | HC | chr4:7763392-7758397 | 20130731
          Length = 1344

 Score = 77.4 bits (189), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 74/137 (54%), Gaps = 8/137 (5%)

Query: 1    MPIILEACHFGEAPTRRYWGKLEIQQEDPTYKAVLRKTSQLARRFWRIQGKEMMNIVXXX 60
            MPIILE      A  RR+WG +EI+  DP YK VLR+ ++++   W +   E   I+   
Sbjct: 1173 MPIILEYTDASRATNRRFWGIMEIKLGDPFYKPVLRRQNKIS---WGLGTYEPRVIIVEL 1229

Query: 61   XXXXXXXXXXXXXXXXGHGEEEEEYYNDPVLDELMTRIEDDTMSLNKTYGILKASIVLCT 120
                               EE    YN P L+ELM RIE D M+LNK+YG +KASIV   
Sbjct: 1230 KCQPADTEEASSSSLEESLEEGN--YN-PELEELMRRIEQDAMTLNKSYGKMKASIV--Q 1284

Query: 121  SEELVSDIYLQETVMLR 137
            ++E +S+ YL ET++ R
Sbjct: 1285 TDEFISENYLLETLIFR 1301