Miyakogusa Predicted Gene

Lj1g3v2682540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2682540.1 Non Characterized Hit- tr|I3SG84|I3SG84_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,94.26,0,Ribosomal_S8e,Ribosomal protein S8e/ribosomal biogenesis
NSA2; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.29416.1
         (137 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088865.1 | ribosomal protein S8e family protein | HC | ch...   235   1e-62
Medtr0508s0010.2 | ribosomal protein S8e family protein | HC | s...   234   2e-62
Medtr0508s0010.1 | ribosomal protein S8e family protein | HC | s...   234   2e-62

>Medtr3g088865.1 | ribosomal protein S8e family protein | HC |
           chr3:40673322-40670252 | 20130731
          Length = 260

 Score =  235 bits (599), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 112/122 (91%), Positives = 116/122 (95%)

Query: 3   DFSFLRVRPVAEYEMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLR 62
           D    +VRPVAE EMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLR
Sbjct: 118 DVPLPKVRPVAEDEMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLR 177

Query: 63  FTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNCSELGLVTPAGKVV 122
           FTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+T+G+IIEVN SELGLVTPAGKVV
Sbjct: 178 FTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITRGSIIEVNVSELGLVTPAGKVV 237

Query: 123 WG 124
           WG
Sbjct: 238 WG 239


>Medtr0508s0010.2 | ribosomal protein S8e family protein | HC |
           scaffold0508:6814-10630 | 20130731
          Length = 260

 Score =  234 bits (598), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 112/122 (91%), Positives = 116/122 (95%)

Query: 3   DFSFLRVRPVAEYEMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLR 62
           D    +VRPVAE EMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLR
Sbjct: 118 DVPLPKVRPVAEDEMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLR 177

Query: 63  FTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNCSELGLVTPAGKVV 122
           FTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+T+G+IIEVN SELGLVTPAGKVV
Sbjct: 178 FTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITRGSIIEVNVSELGLVTPAGKVV 237

Query: 123 WG 124
           WG
Sbjct: 238 WG 239


>Medtr0508s0010.1 | ribosomal protein S8e family protein | HC |
           scaffold0508:6814-10630 | 20130731
          Length = 260

 Score =  234 bits (598), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 112/122 (91%), Positives = 116/122 (95%)

Query: 3   DFSFLRVRPVAEYEMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLR 62
           D    +VRPVAE EMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLR
Sbjct: 118 DVPLPKVRPVAEDEMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLR 177

Query: 63  FTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNCSELGLVTPAGKVV 122
           FTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGV+T+G+IIEVN SELGLVTPAGKVV
Sbjct: 178 FTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITRGSIIEVNVSELGLVTPAGKVV 237

Query: 123 WG 124
           WG
Sbjct: 238 WG 239