Miyakogusa Predicted Gene

Lj1g3v2671480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2671480.1 Non Characterized Hit- tr|C5WXX6|C5WXX6_SORBI
Putative uncharacterized protein Sb01g047050
OS=Sorghu,39.63,0.000000000000001,seg,NULL,CUFF.29412.1
         (240 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g077890.2 | hypothetical protein | HC | chr7:29425866-2942...   278   3e-75
Medtr7g077890.1 | hypothetical protein | HC | chr7:29425866-2942...   278   3e-75

>Medtr7g077890.2 | hypothetical protein | HC |
           chr7:29425866-29424159 | 20130731
          Length = 199

 Score =  278 bits (712), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 132/180 (73%), Positives = 148/180 (82%)

Query: 61  HFTLAGKRKVHITXXXXXXXXXXXXXGWKEWGQKPAPSFPPADLNKMDPSQIQEELAKRH 120
           HFTLAGKRKVHIT              WKEWG+KP+PSF PADL KMD S+I+EE+ KRH
Sbjct: 20  HFTLAGKRKVHITDELDDVFDDEEDDDWKEWGKKPSPSFAPADLTKMDESKIKEEMMKRH 79

Query: 121 TGPVIGFVKLRVGVRRTPDMVAELAMKWTHVLRTGALGIKFMGVDLNTVMFNMESMKDLE 180
           TGPVIGFVKLR GVRRTPD VAELAMKWTHVLRTGA+G++F GVDLNT+MFNM+S+KDLE
Sbjct: 80  TGPVIGFVKLRFGVRRTPDSVAELAMKWTHVLRTGAVGVRFTGVDLNTIMFNMDSIKDLE 139

Query: 181 ELKEYILDQSEAYEIKMGEQFFRRPGDPPLDEVIQKSKDEKGKTENAEPEEVDGNLKTEL 240
           ELKE++ DQSEAYEIKMGEQ F+RPGDP LDE+IQK   EK K +NA  EEVDGN KTEL
Sbjct: 140 ELKEFVFDQSEAYEIKMGEQLFQRPGDPSLDELIQKHNSEKDKADNASQEEVDGNSKTEL 199


>Medtr7g077890.1 | hypothetical protein | HC |
           chr7:29425866-29424159 | 20130731
          Length = 199

 Score =  278 bits (712), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 132/180 (73%), Positives = 148/180 (82%)

Query: 61  HFTLAGKRKVHITXXXXXXXXXXXXXGWKEWGQKPAPSFPPADLNKMDPSQIQEELAKRH 120
           HFTLAGKRKVHIT              WKEWG+KP+PSF PADL KMD S+I+EE+ KRH
Sbjct: 20  HFTLAGKRKVHITDELDDVFDDEEDDDWKEWGKKPSPSFAPADLTKMDESKIKEEMMKRH 79

Query: 121 TGPVIGFVKLRVGVRRTPDMVAELAMKWTHVLRTGALGIKFMGVDLNTVMFNMESMKDLE 180
           TGPVIGFVKLR GVRRTPD VAELAMKWTHVLRTGA+G++F GVDLNT+MFNM+S+KDLE
Sbjct: 80  TGPVIGFVKLRFGVRRTPDSVAELAMKWTHVLRTGAVGVRFTGVDLNTIMFNMDSIKDLE 139

Query: 181 ELKEYILDQSEAYEIKMGEQFFRRPGDPPLDEVIQKSKDEKGKTENAEPEEVDGNLKTEL 240
           ELKE++ DQSEAYEIKMGEQ F+RPGDP LDE+IQK   EK K +NA  EEVDGN KTEL
Sbjct: 140 ELKEFVFDQSEAYEIKMGEQLFQRPGDPSLDELIQKHNSEKDKADNASQEEVDGNSKTEL 199