Miyakogusa Predicted Gene
- Lj1g3v2671420.4
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2671420.4 tr|C0Z2X2|C0Z2X2_ARATH AT2G45950 protein
OS=Arabidopsis thaliana GN=AT2G45950 PE=2 SV=1,75,4e-17,no
description,BTB/POZ fold; Found in Skp1 protein family,SKP1 component;
Skp1,SKP1 component, dimer,CUFF.29409.4
(159 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g077810.1 | ubiquitin-protein ligase, putative | HC | chr7... 261 2e-70
Medtr8g030670.1 | ubiquitin-protein ligase, putative | HC | chr8... 251 1e-67
Medtr6g053620.1 | ubiquitin-protein ligase, putative | HC | chr6... 209 7e-55
Medtr6g053620.2 | ubiquitin-protein ligase, putative | HC | chr6... 209 7e-55
Medtr2g100825.2 | SCF ubiquitin ligase, SKP1 component | HC | ch... 206 9e-54
Medtr2g100825.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 206 9e-54
Medtr2g100830.1 | SCF ubiquitin ligase, SKP1 component | LC | ch... 196 6e-51
Medtr8g007185.1 | SKP1 family, tetramerisation domain protein | ... 189 6e-49
Medtr8g007205.1 | SKP1 family, tetramerisation domain protein | ... 187 3e-48
Medtr8g007195.1 | SKP1 family, tetramerisation domain protein | ... 184 4e-47
Medtr8g007220.1 | SKP1 family, dimerization domain protein | LC ... 172 2e-43
Medtr7g036780.1 | SKP1 family, tetramerisation domain protein | ... 158 2e-39
Medtr3g061700.1 | SKP1 family, dimerization domain protein | HC ... 110 6e-25
Medtr3g110048.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 79 1e-15
Medtr4g032450.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 79 2e-15
Medtr5g022710.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 78 4e-15
Medtr5g022730.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 76 1e-14
Medtr7g094120.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 76 2e-14
Medtr4g033460.1 | SCF ubiquitin ligase, SKP1 component | LC | ch... 75 3e-14
Medtr7g021400.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 74 6e-14
Medtr4g032460.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 74 6e-14
Medtr7g094150.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 73 9e-14
Medtr4g033455.1 | SCF ubiquitin ligase, SKP1 component | LC | ch... 73 1e-13
Medtr7g094170.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 73 1e-13
Medtr4g032400.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 70 8e-13
Medtr8g056060.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 70 1e-12
Medtr7g021380.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 69 2e-12
Medtr8g468480.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 68 4e-12
Medtr4g032510.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 67 6e-12
Medtr4g119422.1 | cullin-like protein | LC | chr4:49486759-49483... 65 2e-11
Medtr1g099870.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 65 2e-11
Medtr1g112590.1 | SCF ubiquitin ligase, SKP1 component, putative... 64 4e-11
Medtr8g089730.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 64 4e-11
Medtr4g032500.1 | SCF ubiquitin ligase, SKP1 component | LC | ch... 62 3e-10
Medtr4g127240.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 61 4e-10
Medtr4g021390.1 | SCF ubiquitin ligase, SKP1 component | LC | ch... 61 4e-10
Medtr7g094280.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 60 1e-09
Medtr1g112570.1 | SKP1 family, dimerization domain protein | LC ... 57 5e-09
Medtr4g017860.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 56 1e-08
Medtr5g078680.1 | SKP1 family, dimerization domain protein | LC ... 55 2e-08
Medtr5g085030.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 55 3e-08
Medtr1g042510.1 | SKP1 family, dimerization domain protein | LC ... 54 5e-08
Medtr7g094310.1 | SCF ubiquitin ligase, SKP1 component | HC | ch... 53 1e-07
Medtr4g032540.1 | SCF ubiquitin ligase, SKP1 component | LC | ch... 49 2e-06
>Medtr7g077810.1 | ubiquitin-protein ligase, putative | HC |
chr7:29389785-29384437 | 20130731
Length = 342
Score = 261 bits (667), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/159 (76%), Positives = 139/159 (87%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M+E+D VIKPEM+KPY+WLQTSDGSIQQVE E+A CPLICQEII KGTGSSKNCAI L
Sbjct: 1 MSEVDMSVIKPEMMKPYIWLQTSDGSIQQVEQEIAMFCPLICQEIIQKGTGSSKNCAICL 60
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
P++VSPAMLSL+LDYCRFHQ GRSNKE+KS+DEKFI+ DT +L L AADSLQL+ LV
Sbjct: 61 PEKVSPAMLSLVLDYCRFHQVPGRSNKERKSHDEKFIRMDTKRLCDLTSAADSLQLRPLV 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS +AR++EGKSPE IRE+FHLPDDLTEEEKLEP K
Sbjct: 121 DLTSRTLARIIEGKSPEEIREIFHLPDDLTEEEKLEPLK 159
>Medtr8g030670.1 | ubiquitin-protein ligase, putative | HC |
chr8:11365706-11369963 | 20130731
Length = 362
Score = 251 bits (642), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 117/159 (73%), Positives = 136/159 (85%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M+E D VIKPEM+KPYVWLQTSD SIQQVE E+A CP ICQEI+ KG G+SKNCA+ L
Sbjct: 1 MSETDMAVIKPEMMKPYVWLQTSDESIQQVEQEIAMFCPFICQEILQKGNGTSKNCAVCL 60
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
PQ+VSPAMLSLILDYCRFHQ GRSNKE+K+YDEKF++ DT +L L AADSLQLK LV
Sbjct: 61 PQQVSPAMLSLILDYCRFHQVLGRSNKERKAYDEKFVRIDTEKLCELTSAADSLQLKPLV 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS A+AR++EG+SPE IR++FHLPDDLTEEEKLEP +
Sbjct: 121 DLTSRALARIIEGRSPEEIRDIFHLPDDLTEEEKLEPLR 159
>Medtr6g053620.1 | ubiquitin-protein ligase, putative | HC |
chr6:19312317-19319101 | 20130731
Length = 345
Score = 209 bits (533), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/152 (66%), Positives = 120/152 (78%), Gaps = 1/152 (0%)
Query: 8 VIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPA 67
++K EM K Y+WLQT DGSIQQVE EVA CP+I E+I G GSSK AISLPQ V+PA
Sbjct: 8 IVKSEM-KSYIWLQTEDGSIQQVEAEVAMFCPMIFNEVIQTGMGSSKTYAISLPQRVTPA 66
Query: 68 MLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAI 127
ML L+LDYCRFH+ GRSNKE+K++DEKFI+ DT +L L AA L+L+ LVDLT+ A+
Sbjct: 67 MLGLVLDYCRFHRAPGRSNKERKTFDEKFIRIDTKKLCELASAAHYLRLRPLVDLTTRAL 126
Query: 128 ARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
AR +EGK+PE IRE FHLPDDLTEEEKLEP K
Sbjct: 127 ARKIEGKTPEEIRETFHLPDDLTEEEKLEPIK 158
>Medtr6g053620.2 | ubiquitin-protein ligase, putative | HC |
chr6:19314613-19319425 | 20130731
Length = 353
Score = 209 bits (533), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/152 (66%), Positives = 120/152 (78%), Gaps = 1/152 (0%)
Query: 8 VIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPA 67
++K EM K Y+WLQT DGSIQQVE EVA CP+I E+I G GSSK AISLPQ V+PA
Sbjct: 8 IVKSEM-KSYIWLQTEDGSIQQVEAEVAMFCPMIFNEVIQTGMGSSKTYAISLPQRVTPA 66
Query: 68 MLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAI 127
ML L+LDYCRFH+ GRSNKE+K++DEKFI+ DT +L L AA L+L+ LVDLT+ A+
Sbjct: 67 MLGLVLDYCRFHRAPGRSNKERKTFDEKFIRIDTKKLCELASAAHYLRLRPLVDLTTRAL 126
Query: 128 ARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
AR +EGK+PE IRE FHLPDDLTEEEKLEP K
Sbjct: 127 ARKIEGKTPEEIRETFHLPDDLTEEEKLEPIK 158
>Medtr2g100825.2 | SCF ubiquitin ligase, SKP1 component | HC |
chr2:43366853-43364097 | 20130731
Length = 310
Score = 206 bits (523), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 116/147 (78%), Gaps = 1/147 (0%)
Query: 12 EMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSL 71
EM KPYVWLQTSDGS QQVE ++A CP IC+E+ KG GSSKNCA+ LPQ+VS M SL
Sbjct: 5 EMTKPYVWLQTSDGSTQQVEQDIAMFCPFICEEL-QKGMGSSKNCAVCLPQQVSSPMWSL 63
Query: 72 ILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVM 131
IL+YCRFHQ GRSNKE+KSYD+ F+K DTN L L AA SLQ + L+DLTS A+AR++
Sbjct: 64 ILNYCRFHQAPGRSNKERKSYDDSFVKIDTNMLCELACAAHSLQFRPLIDLTSRALARII 123
Query: 132 EGKSPEVIREMFHLPDDLTEEEKLEPF 158
E +SPE IR +F +PDDLTEEEKLEP
Sbjct: 124 EKRSPEEIRSIFRVPDDLTEEEKLEPL 150
>Medtr2g100825.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr2:43366853-43364097 | 20130731
Length = 310
Score = 206 bits (523), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 116/147 (78%), Gaps = 1/147 (0%)
Query: 12 EMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSL 71
EM KPYVWLQTSDGS QQVE ++A CP IC+E+ KG GSSKNCA+ LPQ+VS M SL
Sbjct: 5 EMTKPYVWLQTSDGSTQQVEQDIAMFCPFICEEL-QKGMGSSKNCAVCLPQQVSSPMWSL 63
Query: 72 ILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVM 131
IL+YCRFHQ GRSNKE+KSYD+ F+K DTN L L AA SLQ + L+DLTS A+AR++
Sbjct: 64 ILNYCRFHQAPGRSNKERKSYDDSFVKIDTNMLCELACAAHSLQFRPLIDLTSRALARII 123
Query: 132 EGKSPEVIREMFHLPDDLTEEEKLEPF 158
E +SPE IR +F +PDDLTEEEKLEP
Sbjct: 124 EKRSPEEIRSIFRVPDDLTEEEKLEPL 150
>Medtr2g100830.1 | SCF ubiquitin ligase, SKP1 component | LC |
chr2:43369487-43368540 | 20130731
Length = 315
Score = 196 bits (499), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 117/147 (79%)
Query: 12 EMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSL 71
+M+K YVWLQTSDGSIQQVE ++A CP I +EI+ KGTGSSKNCA LPQ+VS +M SL
Sbjct: 5 KMMKSYVWLQTSDGSIQQVEQDIAMFCPFIRKEILQKGTGSSKNCATCLPQQVSSSMWSL 64
Query: 72 ILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVM 131
IL+YCRF GRS+KE+K+YD+ F+K DT L GL AA+SL+L+ ++DLT A+AR++
Sbjct: 65 ILNYCRFRLAPGRSDKEQKAYDDNFVKIDTKMLCGLACAANSLRLQPVIDLTCQALARII 124
Query: 132 EGKSPEVIREMFHLPDDLTEEEKLEPF 158
+SPE IR+MFH+ DDLTEEEKLEP
Sbjct: 125 GKRSPEEIRDMFHVSDDLTEEEKLEPI 151
>Medtr8g007185.1 | SKP1 family, tetramerisation domain protein | HC
| chr8:1343308-1344189 | 20130731
Length = 293
Score = 189 bits (481), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
Query: 10 KPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIH-KGTGSSKNCAISLPQEVSPAM 68
K EM+ P VWLQT DGSIQQVE E+A CP ICQE+I GSSK I LPQ+V+PA+
Sbjct: 3 KTEMMNPCVWLQTYDGSIQQVEQEIAMFCPFICQELILLPQQGSSKTSPICLPQQVTPAI 62
Query: 69 LSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIA 128
L+LILDYCRFH +GRSNKE+KSYDEKF++ D +L L AA LQL L DLT AI
Sbjct: 63 LTLILDYCRFHHVKGRSNKERKSYDEKFVRIDAPRLCELTSAAKYLQLNPLYDLTCHAIT 122
Query: 129 RVMEGKSPEVIREMFHLPDDLTEEEKLE 156
R++EGKS E IR++FHLPDDL EEEKLE
Sbjct: 123 RIIEGKSSEEIRDIFHLPDDLMEEEKLE 150
>Medtr8g007205.1 | SKP1 family, tetramerisation domain protein | HC
| chr8:1356279-1355398 | 20130731
Length = 293
Score = 187 bits (476), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 110/148 (74%), Gaps = 1/148 (0%)
Query: 10 KPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIH-KGTGSSKNCAISLPQEVSPAM 68
K EM+ P VWLQT DGSIQ VE E+A CP ICQE+I GSSK I LPQ+V+PA+
Sbjct: 3 KTEMMNPCVWLQTYDGSIQHVEQEIAMFCPFICQELILLPQQGSSKTSPICLPQQVTPAI 62
Query: 69 LSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIA 128
L+LILDYCRFH +GRSNKE+KSYDEKF++ D +L L AA LQL L DLT AI
Sbjct: 63 LTLILDYCRFHHVKGRSNKERKSYDEKFVRIDAPRLCELTSAAKYLQLNPLYDLTCHAIT 122
Query: 129 RVMEGKSPEVIREMFHLPDDLTEEEKLE 156
R++EGKS E IR++FHLPDDL EEEKLE
Sbjct: 123 RIIEGKSSEEIRDIFHLPDDLMEEEKLE 150
>Medtr8g007195.1 | SKP1 family, tetramerisation domain protein | LC
| chr8:1349757-1350719 | 20130731
Length = 320
Score = 184 bits (466), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/149 (61%), Positives = 113/149 (75%)
Query: 8 VIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPA 67
+++ EM+ YVWLQT DGSIQQV+ E+A + P I QEI+ KGTGS K+ I LPQ+VSP+
Sbjct: 1 MLETEMMNSYVWLQTCDGSIQQVDQEIAMISPFILQEILQKGTGSCKSSPICLPQQVSPS 60
Query: 68 MLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAI 127
+LS ILDYC+FH QG SNKE+K YD KF++ D + LF L AA SLQLK L DLT A+
Sbjct: 61 LLSSILDYCQFHHIQGHSNKERKLYDAKFVRIDPDILFALAFAAKSLQLKPLNDLTCHAL 120
Query: 128 ARVMEGKSPEVIREMFHLPDDLTEEEKLE 156
AR++EGKSP+ IR+MF P DLTEEE LE
Sbjct: 121 ARLIEGKSPKEIRDMFIWPHDLTEEEILE 149
>Medtr8g007220.1 | SKP1 family, dimerization domain protein | LC |
chr8:1360415-1361287 | 20130731
Length = 290
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 107/144 (74%)
Query: 12 EMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSL 71
EM+KPYVWL+T D SIQ V+ E+A VCP ICQEI KGTGSSK+ AI LP++VS AML+L
Sbjct: 5 EMVKPYVWLKTCDDSIQVVDREIAMVCPFICQEISEKGTGSSKSSAICLPEKVSLAMLNL 64
Query: 72 ILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVM 131
ILDYC FH QG SNKE+K YDE+F++ + LF L AA +LQLK L+DLT IAR +
Sbjct: 65 ILDYCLFHHIQGHSNKERKLYDEEFVRIVADNLFELAYAAYNLQLKPLIDLTCHEIARTV 124
Query: 132 EGKSPEVIREMFHLPDDLTEEEKL 155
E KSP+ I ++FH DD +EE L
Sbjct: 125 EIKSPKEICDIFHWLDDRAKEEML 148
>Medtr7g036780.1 | SKP1 family, tetramerisation domain protein | LC
| chr7:13589811-13590524 | 20130731
Length = 237
Score = 158 bits (399), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 110/149 (73%), Gaps = 7/149 (4%)
Query: 10 KPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAML 69
K E +K ++LQT DGSIQQVE E+A CP ICQEI+ KG G S++ AI LP+EVS AML
Sbjct: 3 KTETMK--LYLQTCDGSIQQVEQEIAMFCPFICQEILQKGMGFSESSAICLPKEVSSAML 60
Query: 70 SLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIAR 129
+ IL+YC+FH+ +G S+KE+K +DEKF+ T +L+ L AA+SL+L+SLV+LT AIAR
Sbjct: 61 NSILEYCQFHRVRGCSDKERKLFDEKFVTIPTERLYELASAANSLKLRSLVELTCRAIAR 120
Query: 130 VMEGKSPEVIREMFHLPDDLTEEEKLEPF 158
+E SPE I + F+LP +EKLEPF
Sbjct: 121 TLERSSPEEICDTFNLP-----KEKLEPF 144
>Medtr3g061700.1 | SKP1 family, dimerization domain protein | HC |
chr3:24617910-24618577 | 20130731
Length = 203
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 67/89 (75%)
Query: 68 MLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAI 127
ML+LILDYCRF QG SNKE+KSYD+KF+ D +L L+ A LQL+ L DLT AI
Sbjct: 1 MLTLILDYCRFDHVQGHSNKEQKSYDDKFVWIDATRLCELMSVAKYLQLEPLYDLTCHAI 60
Query: 128 ARVMEGKSPEVIREMFHLPDDLTEEEKLE 156
AR++EG+S E I ++FHLPDDL EEEKLE
Sbjct: 61 ARIIEGRSSEEIHDIFHLPDDLMEEEKLE 89
>Medtr3g110048.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr3:50914886-50915363 | 20130731
Length = 158
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 12/144 (8%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L +SDG +V VA Q I H N AI L Q+V+ +L+++++YC+ H
Sbjct: 10 LNSSDGETFKVSKMVARES----QVIKHMIEEDCANEAIPL-QDVTANILAMVIEYCKKH 64
Query: 80 QRQGRSNKEKK-------SYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVME 132
++ + K +D +F+K D LF L+ AA+ L++KSL+DLT +A +M+
Sbjct: 65 VDAAAASSDGKPSEDDLEDWDAEFVKVDKGTLFNLIDAANYLEIKSLLDLTCQTVADMMK 124
Query: 133 GKSPEVIREMFHLPDDLTEEEKLE 156
GK+PE IR F++ +D T +E+ E
Sbjct: 125 GKTPEEIRNTFNIENDFTPQEEEE 148
>Medtr4g032450.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr4:11174465-11174992 | 20130731
Length = 175
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 11/143 (7%)
Query: 18 VWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCR 77
+ L++ DG +E VA L Q I H S + I +P V+ +L+ +++YC+
Sbjct: 26 ITLKSYDGETFDIEEAVA----LESQTIKHLIDDVSDDTGIPIPN-VTGKILAKVIEYCK 80
Query: 78 FHQRQGRSNK-----EKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVM- 131
H RSN+ E K +D +F++ D LF L+ AA+ L +KSL+DLT ++A +M
Sbjct: 81 KHVEYARSNEKPPEDELKKWDAEFVQVDQETLFDLILAANYLNIKSLLDLTCKSVADMML 140
Query: 132 EGKSPEVIREMFHLPDDLTEEEK 154
K+PE IRE F++ +D + EE+
Sbjct: 141 AAKTPEAIRETFNIKNDYSPEEE 163
>Medtr5g022710.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr5:8981617-8983722 | 20130731
Length = 155
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 10/136 (7%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SDG +V+ VA L Q I H + I LP V+ +L+ +++YC+ H
Sbjct: 9 LKSSDGETFEVDEAVA----LESQTIKHMIEDDCADSGIPLPN-VTSKILAKVIEYCKKH 63
Query: 80 QRQGR-----SNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGK 134
S E KS+D +F+K D LF L+ AA+ L +KSL+DLT +A +++GK
Sbjct: 64 VEAAAAEEKPSEDEIKSWDGEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGK 123
Query: 135 SPEVIREMFHLPDDLT 150
+PE IR+ F++ +D +
Sbjct: 124 TPEEIRKTFNIKNDFS 139
>Medtr5g022730.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr5:8991146-8992974 | 20130731
Length = 155
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SDG +V+ VA L Q I H + I LP V+ +L+ +++YC+ H
Sbjct: 9 LKSSDGETFEVDEAVA----LESQTIKHMIEDDCADSGIPLPN-VTSKILAKVIEYCKKH 63
Query: 80 QRQGRSNK-----EKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGK 134
+ + E KS+D +F+K D LF L+ AA+ L +K+L+DLT +A +++GK
Sbjct: 64 VDAAAAEEKPNEDELKSWDSEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVADMIKGK 123
Query: 135 SPEVIREMFHLPDDLT 150
+PE IR+ F++ +D +
Sbjct: 124 TPEEIRKTFNIKNDFS 139
>Medtr7g094120.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr7:37466777-37466298 | 20130731
Length = 159
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 12/142 (8%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++ D I +V VA L Q I H + AI + Q V+ +L+ +++YC+ H
Sbjct: 11 LKSYDNEIFEVPEAVA----LESQTIKHMIEDDCADNAIPV-QNVTGKILAKVIEYCKKH 65
Query: 80 -------QRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVME 132
++ S + K++D F+K D LF L+ AA+ L +KSL+DLT + A +M+
Sbjct: 66 VQVASADEKPSESEEYLKNWDADFVKVDKETLFELILAANYLDIKSLLDLTCQSAADMMK 125
Query: 133 GKSPEVIREMFHLPDDLTEEEK 154
GK+PE +REMF++ +D + EE+
Sbjct: 126 GKTPEEMREMFNIKNDFSPEEE 147
>Medtr4g033460.1 | SCF ubiquitin ligase, SKP1 component | LC |
chr4:11932971-11931829 | 20130731
Length = 248
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 18/142 (12%)
Query: 18 VWLQTSDGSIQQVEHEVA----TVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLIL 73
+ L +SDG I ++E VA T+ LI ++++ N I +P+ V+ +L+LI+
Sbjct: 12 ITLTSSDGEIFEIEKTVAMEFKTIKNLI-EDVVD-------NNRIPIPK-VTGKILALIV 62
Query: 74 DYCRFHQRQGRSNKEK-----KSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIA 128
+YC+ H S+++ K++D +F++ D LF L+ AA L +KSL DLT +A
Sbjct: 63 EYCKKHVNAVNSDEKSSEHDLKTWDAEFVQLDHPVLFDLISAASFLDIKSLYDLTCKTVA 122
Query: 129 RVMEGKSPEVIREMFHLPDDLT 150
+M GK+PE IR MF++ +D +
Sbjct: 123 DMMNGKTPEQIRAMFNIVNDYS 144
>Medtr7g021400.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr7:6778355-6778825 | 20130731
Length = 156
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 79/136 (58%), Gaps = 10/136 (7%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SD +V VA L Q I H + I +P V+ +L+ +++YC+ H
Sbjct: 10 LKSSDNETFEVPEAVA----LESQTIKHMIEDDCTDNGIPVPN-VTGQILAKVIEYCKKH 64
Query: 80 QRQGRSNK-----EKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGK 134
S++ + K++D +F+K D + LF L+ AA+ L +KSL+DLT ++A +++GK
Sbjct: 65 VDAASSDEKPSEDDLKNWDAEFVKVDQDTLFDLILAANYLNIKSLLDLTCQSVADMIKGK 124
Query: 135 SPEVIREMFHLPDDLT 150
+PE IR+ F++ +D T
Sbjct: 125 TPEEIRKTFNIKNDFT 140
>Medtr4g032460.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr4:11179505-11179053 | 20130731
Length = 150
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 81/139 (58%), Gaps = 13/139 (9%)
Query: 16 PYVWLQTSDGSIQQVEHEVA----TVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSL 71
P + L++SDG ++E VA T+ LI +E + + I L V+ +L++
Sbjct: 5 PKIILKSSDGETFKIEKAVAMQSQTIKHLIDEE-------CANDTGIPLTN-VTGKILAM 56
Query: 72 ILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVM 131
+++YC+ H S++ +K +D +F+K D N LF L+ AA+ L +KSL+DLT +
Sbjct: 57 VIEYCKKHVDAASSDELEK-WDAEFVKVDQNTLFNLIMAANYLNIKSLLDLTCMTTMDNI 115
Query: 132 EGKSPEVIREMFHLPDDLT 150
+ K+PE IR++F++ +D T
Sbjct: 116 KDKTPEEIRKIFNIKNDYT 134
>Medtr7g094150.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr7:37476563-37476093 | 20130731
Length = 156
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SD +V VA L Q I H + I +P V+ +L+ +++YC+ H
Sbjct: 10 LKSSDNETFEVPEAVA----LESQTIKHMIEDDCTDNGIPVPN-VTGQILAKVIEYCKKH 64
Query: 80 QRQGRSNKEK------KSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEG 133
S+ EK K++D +F+K D ++LF L+ AA+ L +KSL+DLT +A +++G
Sbjct: 65 -VDAESSDEKPSEDDLKNWDAEFVKVDQDKLFDLILAANYLNIKSLLDLTCQTVADMIKG 123
Query: 134 KSPEVIREMFHLPDDLT 150
K+PE IR+ F++ +D T
Sbjct: 124 KTPEEIRKTFNIKNDFT 140
>Medtr4g033455.1 | SCF ubiquitin ligase, SKP1 component | LC |
chr4:11929419-11928589 | 20130731
Length = 160
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 10/140 (7%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L +SDG I ++E EVA I I N I + +V +L+L+++YC+ H
Sbjct: 14 LTSSDGEIFEIEKEVAMESKTIKNLI----EDLDDNTRIPI-YKVRGEILALVIEYCKKH 68
Query: 80 QRQGRSNKEK-----KSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGK 134
S+++ K +D +F++ D LF L+ AA+ L +KSL DLT +A +M K
Sbjct: 69 VNAMNSDEKPSKHALKMWDAEFVQLDQPVLFDLISAANFLDIKSLYDLTCKTVADMMNDK 128
Query: 135 SPEVIREMFHLPDDLTEEEK 154
+PE IREMF++ +D + +E+
Sbjct: 129 TPEQIREMFNIVNDYSPQEE 148
>Medtr7g094170.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr7:37481085-37480615 | 20130731
Length = 156
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SD +V VA L Q I + + I +P V+ +L+ +++YC+ H
Sbjct: 10 LKSSDNETFEVPEAVA----LESQTIKYMIEDDCTDNGIPVPN-VTGQILAKVIEYCKKH 64
Query: 80 QRQGRSNKEK------KSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEG 133
S+ EK K++D +F+K D +LFGL+ AA+ L +KSL+DLT +A +++G
Sbjct: 65 -VDAESSDEKPSEDDLKNWDAEFVKVDQAKLFGLILAANYLNIKSLLDLTCQTVADMIKG 123
Query: 134 KSPEVIREMFHLPDDLT 150
K+PE IR+ F++ +D T
Sbjct: 124 KTPEEIRKTFNIKNDFT 140
>Medtr4g032400.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr4:11160477-11160971 | 20130731
Length = 164
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 17/142 (11%)
Query: 18 VWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCA----ISLPQEVSPAMLSLIL 73
+ L++SD ++E VA L Q I H NCA I LP V+ +L++++
Sbjct: 14 ITLKSSDNETFEIEKAVA----LESQTIKHL---IDDNCADDSGIPLPN-VTGKILAMVI 65
Query: 74 DYCRFHQRQGRSNK-----EKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIA 128
++C+ H S++ E +D +F+K D + LF L+ AA+ L +KSL+DLT +A
Sbjct: 66 EHCKKHVDATSSDEKPSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKTVA 125
Query: 129 RVMEGKSPEVIREMFHLPDDLT 150
+++G++PE IR+ F++ +D T
Sbjct: 126 DMIKGRTPEEIRKTFNIINDYT 147
>Medtr8g056060.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr8:24406704-24406231 | 20130731
Length = 157
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Query: 18 VWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCR 77
V L++SD +VE VA L Q I H I LP V+ +L+ +++YC+
Sbjct: 8 VTLKSSDDETFEVEEAVA----LKSQTIKHMIEDDCAKTEIPLPN-VTSKILAKVIEYCK 62
Query: 78 FHQRQGRSNKEK------KSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVM 131
H S++ K K++D +F+K D N F L+ AA+ L +KSL++LT +A +
Sbjct: 63 KHVEATTSSEGKPSEDDVKAWDAEFVKVDLNTRFELILAANYLDIKSLLELTCQDVAETI 122
Query: 132 EGKSPEVIREMFHLPDDLTEEEKLEPFK 159
+ K+ E IR++F++ +D + EE E K
Sbjct: 123 KDKTVEEIRKIFNVENDFSPEEYAELLK 150
>Medtr7g021380.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr7:6774068-6774538 | 20130731
Length = 156
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SD +V VA L Q I H + I +P V+ +L+ +++YC+ H
Sbjct: 10 LKSSDNETFEVPEAVA----LELQTIKHMIKDDCTDNGILVPN-VTGQILAKVIEYCKKH 64
Query: 80 QRQGRSNK-----EKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGK 134
S++ + K++D +F+K LF L+ AA+ L +KSL+DLT +A +++GK
Sbjct: 65 IDAASSDEKPSEDDLKNWDAEFVKVHQTTLFDLILAANDLNIKSLLDLTCQYVADMIKGK 124
Query: 135 SPEVIREMFHLPDDLT 150
+PE IR+ F++ +D T
Sbjct: 125 TPEEIRKTFNIKNDFT 140
>Medtr8g468480.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr8:24817057-24817533 | 20130731
Length = 158
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 13/144 (9%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHK-GTGSSKNCAISLPQEVSPAMLSLILDYCRF 78
L++SDG +++ VA + Q I H G + I L Q V+ +L+ +++YC+
Sbjct: 9 LKSSDGETFEIDEVVA----MESQTIKHVIEAGCVDDAGIPLLQ-VTRNILAKVIEYCKK 63
Query: 79 HQRQGRSNKEKKS------YDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVME 132
H + S++EK S +D +F+K D L L AA+ L +K+L DLT IA +M+
Sbjct: 64 H-VEATSSEEKPSEDALNAWDTEFLKVDPYTLMKLTLAANYLNIKNLYDLTCKTIADMMK 122
Query: 133 GKSPEVIREMFHLPDDLTEEEKLE 156
K PE IRE F++ +D T EE+ E
Sbjct: 123 NKPPEEIRETFNIVNDYTPEEEAE 146
>Medtr4g032510.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr4:11192751-11192290 | 20130731
Length = 153
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 6/136 (4%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++ +G ++E VA I + +I + IS V+ +L+++++YC+ H
Sbjct: 11 LKSYEGETFEIEEAVAMQSQTI-KLLIDDDCANDTGIPIS---NVTSKILAMVIEYCKKH 66
Query: 80 QRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSPEVI 139
S++ +K +D +F++ D + LF L+ AA+ L +KSL+DLT A ++ K+PE I
Sbjct: 67 ADDVSSDELRK-WDAEFVQVDQDTLFNLISAANYLNIKSLLDLTCMTAADNIKDKTPEEI 125
Query: 140 REMFHLP-DDLTEEEK 154
R++F++ DD T EE+
Sbjct: 126 RKIFNIKNDDYTPEEE 141
>Medtr4g119422.1 | cullin-like protein | LC | chr4:49486759-49483972
| 20130731
Length = 368
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L +SDG + +V+++VA + I I TG ++SL VS +L+++++YC+ H
Sbjct: 235 LISSDGDMFEVDYDVALMSKTIEDAIETDPTGDVNCISLSL---VSSKILAMVIEYCKKH 291
Query: 80 QRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSPEVI 139
+ S+ + +D +F+ LF LV +++ + + SL +L I +++GK+ I
Sbjct: 292 KNAQMSDVDLMDWDVEFVNVHYTTLFDLVLSSNYMNINSLYNLVGGKIGDMIKGKTAGEI 351
Query: 140 REMFHLPDDLTEEEK 154
++F + D T+EE+
Sbjct: 352 AQLFDIKDVCTQEEQ 366
>Medtr1g099870.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr1:45071880-45071569 | 20130731
Length = 103
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 7/93 (7%)
Query: 71 LILDYCRFH-QRQGRSNKEK------KSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLT 123
+++DYC+ H S+ EK K++D +F+K D LF L+ AA+ L +K L+DLT
Sbjct: 1 MVIDYCKKHVDATAASSDEKPSEDDLKNWDAEFVKVDQATLFDLILAANYLDIKGLLDLT 60
Query: 124 SCAIARVMEGKSPEVIREMFHLPDDLTEEEKLE 156
+A +++GK+PE IR+ F++ +D T +E+ E
Sbjct: 61 CQIVADMIKGKTPEEIRKTFNIKNDFTPKEEEE 93
>Medtr1g112590.1 | SCF ubiquitin ligase, SKP1 component, putative |
LC | chr1:50963396-50964582 | 20130731
Length = 156
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 51 GSSKNCAISLPQEVSPAMLSLILDYCRFH-----QRQGRSNKEKKSYDEKFIKKDTNQLF 105
G +N IS +E+S L I +Y + H R ++ +S+D +FIK D + LF
Sbjct: 45 GKDENYEISFEKEISSKTLLKINEYVKKHADAASTSSNRISRSLRSWDLEFIKVDRHTLF 104
Query: 106 GLVKAADSLQLKSLVDLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLE 156
LV AA LQ+ L++L+S + GK+PE I ++L +D+T +E+ E
Sbjct: 105 ALVLAAKYLQITDLINLSSETVRAKTRGKTPEKIHRYYNLKNDMTPQEEEE 155
>Medtr8g089730.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr8:37363116-37362796 | 20130731
Length = 106
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 12/89 (13%)
Query: 62 QEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVD 121
Q V+ +L+ +++YC KK D F+K D LF L+ A++ L +KSL+D
Sbjct: 14 QNVAGMILAKVIEYC------------KKHVDGDFVKVDQGTLFDLILASNYLDIKSLLD 61
Query: 122 LTSCAIARVMEGKSPEVIREMFHLPDDLT 150
LT + +++GK+PE IRE FH+ +D T
Sbjct: 62 LTCETVVNMIKGKTPEQIRETFHIKNDFT 90
>Medtr4g032500.1 | SCF ubiquitin ligase, SKP1 component | LC |
chr4:11190203-11189647 | 20130731
Length = 152
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++S+G ++E VA I + +I + IS V+ +L+++++YC+ H
Sbjct: 11 LKSSEGETFEIEEAVAVQSQTI-KHLIGDQCANDTEIPIS---NVTGKILAMVIEYCKKH 66
Query: 80 QRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSPEVI 139
S+ E + +D +F++ D + L L+ AA L +KSL DL A ++ K+PE I
Sbjct: 67 -VDAVSSDELRKWDAEFVQVDQDTLLKLILAARYLDIKSLYDLGCMTTANNIKDKTPEEI 125
Query: 140 REMFHLPDDLTEEEKLE 156
++F++ D+ T EEK E
Sbjct: 126 CKIFNIKDEYTPEEKEE 142
>Medtr4g127240.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr4:52792943-52791050 | 20130731
Length = 125
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 57 AISLPQEVSPAMLSLILDYCRFHQRQGRSNKEK-KSYDEKFIKK-DTNQLFGLVKAADSL 114
I +P S +L+ +++YC+ H S E K +D FIK+ + LF L++AA+ L
Sbjct: 29 GIPVPNATSK-ILTKVIEYCKKHVEATSSTSEDHKVWDADFIKEVNVVMLFELIRAANYL 87
Query: 115 QLKSLVDLTSC-AIARVMEGKSPEVIREMFHLPDDLT 150
+KSL+DL +C +A +++GK+PE I + F++ +D T
Sbjct: 88 NVKSLLDLLTCQVVANMIKGKTPEEICKAFNIENDFT 124
>Medtr4g021390.1 | SCF ubiquitin ligase, SKP1 component | LC |
chr4:6948402-6947932 | 20130731
Length = 156
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
+++SDG ++E ++ Q I + G++ + I +P + L+ +++YC+ H
Sbjct: 12 MKSSDGETFEIEE-------VVFQSIKNLTDGAANDTEILVPH-IPGKFLAKVIEYCKKH 63
Query: 80 QRQGRSNK-----EKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGK 134
S++ E +D +F+K D +F L+ AA L +KSL+DL+ A+A +++ K
Sbjct: 64 VEAASSDEKLFDDELNKWDTEFVKVDNVTIFNLIWAASYLNIKSLLDLSMKALADMIKDK 123
Query: 135 SPEVIREMFHL 145
PE I ++F++
Sbjct: 124 KPEEISKIFNI 134
>Medtr7g094280.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr7:37526020-37525544 | 20130731
Length = 158
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 15 KPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILD 74
K + L++ DG +V VA L Q I H + I +P V+ +L+ +++
Sbjct: 6 KKMITLKSDDGETFEVSEAVA----LKSQTIKHIIEDDCADNVIPVPN-VTGKILAKVIE 60
Query: 75 YCRFHQRQGRSNK-----EKKSYDEKFIKK-DTNQLFGLVKAADSLQLKSLVDLTSCAIA 128
YC+ H S++ + K++D F K+ D LF ++ AA+ L +K+L+DL +A
Sbjct: 61 YCKKHVEATSSDEKVSEDDLKNWDADFAKEVDQQTLFQILLAANYLNIKNLLDLCCQTVA 120
Query: 129 RVMEGKSPEVIREMFHLPDDLTEEEK 154
++ K PE IRE+F + +D EE+
Sbjct: 121 DDIKDKKPEEIREIFSVENDFNPEEE 146
>Medtr1g112570.1 | SKP1 family, dimerization domain protein | LC |
chr1:50956461-50958154 | 20130731
Length = 285
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 24 DGSIQQVE----HEVATVCPLICQEIIHKGT------GSSK--NCAISLPQEVSPAMLSL 71
DG + ++E + +TV LI + I +G G+S+ NC IS E+S L
Sbjct: 7 DGVVLKLEDALVYASSTVKKLIGENISSRGCLSVCLLGASQGENCEISFVVEISSQTLLK 66
Query: 72 ILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVM 131
I +Y + H G + K +++D +FIK D + LF LV AA+ L+++ L+DL SC
Sbjct: 67 INEYVKKHADAGDNEKSLRNWDLEFIKVDRHTLFALVLAANYLKIRDLLDL-SCEAVMAK 125
Query: 132 EGKSPE 137
+G PE
Sbjct: 126 DGMIPE 131
>Medtr4g017860.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr4:5646317-5647329 | 20130731
Length = 220
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 92 YDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSPEVIREMFHLPDDLT 150
+D +F+K D LF LV+AA+ L +KSL++LT + +M GK+ E IR+ F + +D +
Sbjct: 146 WDAEFVKVDNTTLFELVRAANYLDIKSLLELTCKTVGEIMHGKTSEQIRQAFKIANDFS 204
>Medtr5g078680.1 | SKP1 family, dimerization domain protein | LC |
chr5:33630228-33632124 | 20130731
Length = 258
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 24 DGSIQQVE----HEVATVCPLICQEIIHKG--------TGSSKNCAISLPQEVSPAMLSL 71
DG + ++E + +TV LI + I +G +G +N IS +E+S L
Sbjct: 7 DGVVFELEDALVYSSSTVKKLIVENISSRGCFGGCLFGSGQGENIEISFVEEISSETLLK 66
Query: 72 ILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVM 131
I +Y + H G + K +++D +FI+ D + LF LV AA L+++ L+DL SC
Sbjct: 67 INEYVKKHAEAGDNEKSLRNWDLEFIEVDRHALFALVLAAHYLKIRDLLDL-SCEAVMTE 125
Query: 132 EGKSPE 137
+PE
Sbjct: 126 NATTPE 131
>Medtr5g085030.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr5:36687130-36686663 | 20130731
Length = 155
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 17/144 (11%)
Query: 20 LQTSDGSIQQVEHEVA----TVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDY 75
L++SDG +++ VA T+ LI + + I L V+ +L+ +++Y
Sbjct: 9 LKSSDGETFEIDEAVALESQTIKLLIEDDCVDYS-------GIPLSN-VTSNILAKVIEY 60
Query: 76 CRFHQRQGRSNKEK-----KSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARV 130
C+ H G S ++ ++++ +F+K D + L L+ AA+ L +K+L+DLT + +
Sbjct: 61 CKKHVEVGSSEEKSLKDDLRAWESEFVKVDQDTLLDLISAANYLNIKNLLDLTCKTVGEM 120
Query: 131 MEGKSPEVIREMFHLPDDLTEEEK 154
M+ +PE I + F +D + +E+
Sbjct: 121 MKKTTPEEILKTFSSANDYSPKEE 144
>Medtr1g042510.1 | SKP1 family, dimerization domain protein | LC |
chr1:15854808-15856398 | 20130731
Length = 288
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 42 CQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDT 101
C + H G G N IS +E+S L I +Y + H+ + K + +D++FIK D
Sbjct: 37 CISVCHFGGGQGNNFEISFEEEISRKTLLKIKEYVKKHEDARDNEKSLRIWDQEFIKVDH 96
Query: 102 NQLFGLVKAADSLQLKSLVDLT 123
LF +V AA L+++ LVDL+
Sbjct: 97 RTLFAIVLAAHYLKIRDLVDLS 118
>Medtr7g094310.1 | SCF ubiquitin ligase, SKP1 component | HC |
chr7:37535215-37535690 | 20130731
Length = 148
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 23/147 (15%)
Query: 15 KPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILD 74
K + L++ DG +V VA L Q I H + + + +L+ +++
Sbjct: 6 KKMITLKSDDGETFEVSEAVA----LKSQTIKH-----------IIEDDCADNILAKVIE 50
Query: 75 YCRFHQRQGRSNKEK------KSYDEKFIKK-DTNQLFGLVKAADSLQLKSLVDLTSCAI 127
YC+ H + S+ EK K++D F K+ D LF ++ AA+ L +K+L+DL +
Sbjct: 51 YCKKH-VEATSSDEKVSEDDLKNWDADFTKEVDQQTLFQILLAANYLNIKNLLDLCCQTV 109
Query: 128 ARVMEGKSPEVIREMFHLPDDLTEEEK 154
A ++ K PE IR++F++ +D + EE+
Sbjct: 110 ADDIKDKKPEEIRKIFNVENDFSPEEE 136
>Medtr4g032540.1 | SCF ubiquitin ligase, SKP1 component | LC |
chr4:11210119-11211232 | 20130731
Length = 132
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 100 DTNQLFGLVKAADSLQLKSLVDLTSCAIARVM-EGKSPEVIREMFHLPDDLT--EEEKL 155
D N LF L+ AA+ L K+L+DLT +A +M E K+PE IR+ H+ + T EEEK+
Sbjct: 70 DQNTLFDLMLAANYLDFKTLLDLTCKTVANMMLEAKTPEAIRKKLHIKSNYTPEEEEKI 128