Miyakogusa Predicted Gene

Lj1g3v2658210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2658210.1 Non Characterized Hit- tr|B7FGJ0|B7FGJ0_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,58.43,2e-18,seg,NULL,CUFF.29397.1
         (93 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g077380.1 | hypothetical protein | HC | chr7:29214815-2921...    90   5e-19

>Medtr7g077380.1 | hypothetical protein | HC |
          chr7:29214815-29217290 | 20130731
          Length = 163

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 2/62 (3%)

Query: 32 RKRPLDSDVHS--NYFKLRAVVRDLRPHFIQVLQTPDFKNCKASEEIRERLKIVIKLCDN 89
          +KRP +SD +S  NY K+RA+VRDLRP FIQVLQTPD+KNC AS EIR++LKIV+KL ++
Sbjct: 25 KKRPFESDSNSTSNYIKIRALVRDLRPQFIQVLQTPDYKNCSASIEIRDKLKIVLKLYND 84

Query: 90 MK 91
          MK
Sbjct: 85 MK 86