Miyakogusa Predicted Gene

Lj1g3v2657190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2657190.1 tr|B9I6K5|B9I6K5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_807148 PE=4
SV=1,50.83,3e-18,seg,NULL,CUFF.29395.1
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g089200.1 | fasciclin-arabinogalactan-like protein | HC | ...   143   4e-35

>Medtr2g089200.1 | fasciclin-arabinogalactan-like protein | HC |
           chr2:37661727-37663004 | 20130731
          Length = 354

 Score =  143 bits (360), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 91/122 (74%), Gaps = 6/122 (4%)

Query: 1   MASS--CWCWFSVYFAASITLGVIAITATIHPSSKNSSPSQEITP-LTQSLSRNASRALR 57
           MASS  CWCWF +YF AS+ LGVIAIT+ IH +SK SSP  E+ P  T +LS NA+ AL+
Sbjct: 1   MASSYSCWCWFPIYFIASVALGVIAITSAIHSNSK-SSP--EVIPSQTHTLSTNATEALK 57

Query: 58  KAGYTHMADLLHRSXXXXXXXQNTTFFAIKDSAFRNTSLPRWFLKSLLLYHTTTTKASMK 117
           K G+  MADLLHRS       +N+TFFAIKDSA +NTSLP WFLKSLL+YHT TTK +M+
Sbjct: 58  KQGFVLMADLLHRSPPFFLPPKNSTFFAIKDSAIKNTSLPLWFLKSLLMYHTFTTKLTMQ 117

Query: 118 DL 119
            L
Sbjct: 118 QL 119