Miyakogusa Predicted Gene

Lj1g3v2656180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2656180.1 Non Characterized Hit- tr|F6I613|F6I613_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,60,3e-16,
,CUFF.29394.1
         (79 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g031010.1 | hypothetical protein | HC | chr8:11559297-1156...   125   6e-30

>Medtr8g031010.1 | hypothetical protein | HC |
          chr8:11559297-11561555 | 20130731
          Length = 79

 Score =  125 bits (315), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 70/79 (88%)

Query: 1  MSLMSPKSEKLVRRITIAVTVTASYFLLTADYGSQPNALDPIKKQLLSVESTVKDYIFGS 60
          MSLM+PK++K V+R+TI  T+TASYFLLTADYG +PNALDPIKKQLLS +STVK++  GS
Sbjct: 1  MSLMNPKTDKFVKRLTIVATITASYFLLTADYGPKPNALDPIKKQLLSAQSTVKEFFLGS 60

Query: 61 KTESQKKQIGKLDSNKDHP 79
          K+ES++K IGK DSNKDHP
Sbjct: 61 KSESEEKHIGKSDSNKDHP 79