Miyakogusa Predicted Gene

Lj1g3v2628750.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2628750.3 tr|B9ICB1|B9ICB1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1098219 PE=3
SV=1,76.25,0,seg,NULL; no description,NULL; ACETYL-COENZYME A
CARBOXYLASE CARBOXYL TRANSFERASE ALPHA,Acetyl-CoA c,CUFF.29363.3
         (261 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g066870.1 | acetyl-CoA carboxylase, carboxyl transferase, ...   203   1e-52
Medtr7g066870.2 | acetyl-CoA carboxylase, carboxyl transferase, ...   202   4e-52

>Medtr7g066870.1 | acetyl-CoA carboxylase, carboxyl transferase,
           alpha subunit | HC | chr7:24405339-24399341 | 20130731
          Length = 860

 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/264 (45%), Positives = 159/264 (60%), Gaps = 39/264 (14%)

Query: 1   MKSEELGQGEAIAHNLRTMFGLKVPIXXXXXXXXXXXXALAIACPNKMFMLENSAFYVAS 60
           +KSEEL QGEAIAHNLR+MFGLKVP+            ALAI C NK+ MLEN  FYVAS
Sbjct: 297 LKSEELNQGEAIAHNLRSMFGLKVPVISIVIGEGGSGGALAIGCANKLLMLENGVFYVAS 356

Query: 61  PDACAAILWXXXXXXXXXXXXLRITAQEHYRLGIADGIIPEPVGGAHADPTWTSQQIKLA 120
           P+ACAAILW            L+ITA E  +L +ADG+IPEP+GGAH DP+WTSQQIK+A
Sbjct: 357 PEACAAILWKSSKAAPKAAKKLKITATELCKLKVADGVIPEPLGGAHVDPSWTSQQIKIA 416

Query: 121 ITQAMEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITDVESE 180
           I +AM+ELTKM+ E+LL HR LKFR +                              E +
Sbjct: 417 INKAMDELTKMNTEDLLKHRMLKFRKL------------------------------EVQ 446

Query: 181 LQGLKKIILEA-----KGPSDPISKEPIQKLVNEVDQEITKALISMGLTEKVQSVMKELS 235
           ++ LK+ IL++     K   D   K+  +KL  EVDQE+++A  ++GLT+ +  +  E S
Sbjct: 447 IEKLKQQILKSSSQPPKLNLDKTIKKLEEKLEKEVDQELSEAAKALGLTQSLSKLRDEFS 506

Query: 236 SKASNDSPNQQPLDGNLKEKVDKI 259
             +S+D    QPLD  LK K++K+
Sbjct: 507 KASSDD----QPLDPLLKGKIEKL 526


>Medtr7g066870.2 | acetyl-CoA carboxylase, carboxyl transferase,
           alpha subunit | HC | chr7:24404819-24400154 | 20130731
          Length = 586

 Score =  202 bits (513), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/264 (45%), Positives = 159/264 (60%), Gaps = 39/264 (14%)

Query: 1   MKSEELGQGEAIAHNLRTMFGLKVPIXXXXXXXXXXXXALAIACPNKMFMLENSAFYVAS 60
           +KSEEL QGEAIAHNLR+MFGLKVP+            ALAI C NK+ MLEN  FYVAS
Sbjct: 254 LKSEELNQGEAIAHNLRSMFGLKVPVISIVIGEGGSGGALAIGCANKLLMLENGVFYVAS 313

Query: 61  PDACAAILWXXXXXXXXXXXXLRITAQEHYRLGIADGIIPEPVGGAHADPTWTSQQIKLA 120
           P+ACAAILW            L+ITA E  +L +ADG+IPEP+GGAH DP+WTSQQIK+A
Sbjct: 314 PEACAAILWKSSKAAPKAAKKLKITATELCKLKVADGVIPEPLGGAHVDPSWTSQQIKIA 373

Query: 121 ITQAMEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITDVESE 180
           I +AM+ELTKM+ E+LL HR LKFR +                              E +
Sbjct: 374 INKAMDELTKMNTEDLLKHRMLKFRKL------------------------------EVQ 403

Query: 181 LQGLKKIILEA-----KGPSDPISKEPIQKLVNEVDQEITKALISMGLTEKVQSVMKELS 235
           ++ LK+ IL++     K   D   K+  +KL  EVDQE+++A  ++GLT+ +  +  E S
Sbjct: 404 IEKLKQQILKSSSQPPKLNLDKTIKKLEEKLEKEVDQELSEAAKALGLTQSLSKLRDEFS 463

Query: 236 SKASNDSPNQQPLDGNLKEKVDKI 259
             +S+D    QPLD  LK K++K+
Sbjct: 464 KASSDD----QPLDPLLKGKIEKL 483