Miyakogusa Predicted Gene

Lj1g3v2628750.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2628750.2 tr|Q9LLR0|Q9LLR0_SOYBN Carboxyl transferase alpha
subunit OS=Glycine max GN=accA-1 PE=3 SV=1,33.33,2e-18,seg,NULL;
coiled-coil,NULL,CUFF.29363.2
         (347 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g066870.1 | acetyl-CoA carboxylase, carboxyl transferase, ...    50   3e-06
Medtr7g066870.2 | acetyl-CoA carboxylase, carboxyl transferase, ...    49   6e-06

>Medtr7g066870.1 | acetyl-CoA carboxylase, carboxyl transferase,
           alpha subunit | HC | chr7:24405339-24399341 | 20130731
          Length = 860

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 45/152 (29%)

Query: 1   MEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITDVESELQGL 60
           M+ELTKM+ E+LL HR LKFR +                              E +++ L
Sbjct: 421 MDELTKMNTEDLLKHRMLKFRKL------------------------------EVQIEKL 450

Query: 61  KKIILEAKGPSDPISKEPIQKLV--------NEVDQEITKALISMGLTEKVQSVMKELSS 112
           K+ IL  K  S P  K  + K +         EVDQE+++A  ++GLT+ +  +  E S 
Sbjct: 451 KQQIL--KSSSQP-PKLNLDKTIKKLEEKLEKEVDQELSEAAKALGLTQSLSKLRDEFSK 507

Query: 113 KASNDSPNQQPLDGNLKEKVDKIMQEIKSKMS 144
            +S+D    QPLD  LK K++K+  +   ++S
Sbjct: 508 ASSDD----QPLDPLLKGKIEKLQADFNRRLS 535


>Medtr7g066870.2 | acetyl-CoA carboxylase, carboxyl transferase,
           alpha subunit | HC | chr7:24404819-24400154 | 20130731
          Length = 586

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 45/152 (29%)

Query: 1   MEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITDVESELQGL 60
           M+ELTKM+ E+LL HR LKFR +                              E +++ L
Sbjct: 378 MDELTKMNTEDLLKHRMLKFRKL------------------------------EVQIEKL 407

Query: 61  KKIILEAKGPSDPISKEPIQKLV--------NEVDQEITKALISMGLTEKVQSVMKELSS 112
           K+ IL  K  S P  K  + K +         EVDQE+++A  ++GLT+ +  +  E S 
Sbjct: 408 KQQIL--KSSSQP-PKLNLDKTIKKLEEKLEKEVDQELSEAAKALGLTQSLSKLRDEFSK 464

Query: 113 KASNDSPNQQPLDGNLKEKVDKIMQEIKSKMS 144
            +S+D    QPLD  LK K++K+  +   ++S
Sbjct: 465 ASSDD----QPLDPLLKGKIEKLQADFNRRLS 492