Miyakogusa Predicted Gene

Lj1g3v2628720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2628720.1 tr|Q9M2D9|Q9M2D9_ARATH At3g61250 OS=Arabidopsis
thaliana GN=T20K12.150 PE=2 SV=1,44.87,3e-19, ,CUFF.29359.1
         (151 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g076740.1 | myb transcription factor MIXTA-like protein | ...   146   6e-36
Medtr8g031360.1 | myb transcription factor MIXTA-like protein | ...    99   1e-21
Medtr1g100653.1 | myb transcription factor MIXTA-like protein | ...    54   5e-08

>Medtr7g076740.1 | myb transcription factor MIXTA-like protein | HC
           | chr7:28947368-28944308 | 20130731
          Length = 304

 Score =  146 bits (369), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/166 (56%), Positives = 109/166 (65%), Gaps = 26/166 (15%)

Query: 1   MAQWEGARLEAEARLSSLNT---------TKTTHHCDHFLRMWNSEIGDSFRNFHKPDHN 51
           MAQWE ARLEAEARLS  ++         TKT    D+FLR+WNSE+GD+FR   KPD +
Sbjct: 150 MAQWESARLEAEARLSIESSHFNNNPNSFTKTDSSSDYFLRIWNSEVGDAFRKVQKPDTD 209

Query: 52  QNKNINSFCLSPLSAGS-SSNKCDSVSAVTTNAADPFGSSNNAVKQEL-----LCAEEDV 105
               I S   SP+SAGS SSNKCDS+SAVT        +SN+ VK+EL       + EDV
Sbjct: 210 HINIITSCSQSPISAGSLSSNKCDSISAVT--------ASNSIVKEELDWRNYKFSAEDV 261

Query: 106 VQHHGSDSSCSNDLEDSSDTALQLLLDFPIYNDMSFLEGNSFVCPL 151
           +    SDSS SNDL+DSSDTALQLL DFP+ NDMSFL GNSF  P 
Sbjct: 262 LLE--SDSSSSNDLQDSSDTALQLLFDFPMNNDMSFL-GNSFASPF 304


>Medtr8g031360.1 | myb transcription factor MIXTA-like protein | HC
           | chr8:11745382-11748030 | 20130731
          Length = 297

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/159 (45%), Positives = 87/159 (54%), Gaps = 28/159 (17%)

Query: 1   MAQWEGARLEAEARLS------------SLNTTKTTHHCDHFLRMWNSEIGDSFRNFHKP 48
           MAQWE ARLEAEARLS            SL + K     D+FL++WNSE+G SFR   K 
Sbjct: 151 MAQWESARLEAEARLSKDTSLFNNGNIPSLASNKA--DSDYFLKIWNSEVGQSFRTGRK- 207

Query: 49  DHNQNKNINSFCLSPLSAGSSS----NKCDSVSAVTTNAADPFGSSNNAVKQELLCAEED 104
             +++ +  + C S +S   SS    NKC SVS  TT +          V ++       
Sbjct: 208 SDDEDDDDKTKCQSSMSQEGSSCNNNNKCGSVSVTTTTSN---------VMEDFEWRNYK 258

Query: 105 VVQHHGSDSSCSNDLEDSSDTALQLLLDFPIYNDMSFLE 143
                  DSS SNDLEDSSDTALQLLLDFP  NDMSFLE
Sbjct: 259 SFDVGYDDSSSSNDLEDSSDTALQLLLDFPSNNDMSFLE 297


>Medtr1g100653.1 | myb transcription factor MIXTA-like protein | HC
           | chr1:45595446-45593395 | 20130731
          Length = 295

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 36/158 (22%)

Query: 1   MAQWEGARLEAEARLS-------SLNTTKTTHHCDHFLRMWNSEIGDSFRNFHKPDHNQN 53
           M QWE AR+EAE RLS       S +TTKT  + D+FL++W+S++GD FR          
Sbjct: 143 MVQWESARVEAETRLSLESTLLNSGSTTKT--YPDYFLQLWHSDVGDKFR---------- 190

Query: 54  KNINSFCLSPLSAGSSSNKCDSVS-AVTTNAADPFGSSNNAVKQELLCAEEDVVQHH--- 109
                 C S +S   S   C  VS  V  N       S   ++   L  E++   +    
Sbjct: 191 --AGVVCQSIVSLEES---CSDVSLQVKNNRTQSLKVSTPKLEDVNLIQEQNASSYKLKL 245

Query: 110 -----GSDSSCSNDLEDSSDTALQLLLDFPIYNDMSFL 142
                GSDS  + +  D+SD+AL+ LL  P  +++ FL
Sbjct: 246 EDDISGSDSG-NYEFLDTSDSALKHLLRMP--DEIGFL 280