Miyakogusa Predicted Gene

Lj1g3v2627570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2627570.1 tr|Q6AWV5|Q6AWV5_ARATH At4g00525 OS=Arabidopsis
thaliana GN=At4g00525 PE=2 SV=1,42.4,1e-18, ,CUFF.29345.1
         (140 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g076690.1 | hypothetical protein | HC | chr7:28903843-2890...   172   7e-44

>Medtr7g076690.1 | hypothetical protein | HC |
           chr7:28903843-28901286 | 20130731
          Length = 142

 Score =  172 bits (437), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 86/142 (60%), Positives = 99/142 (69%), Gaps = 4/142 (2%)

Query: 1   MAPEMERTHEAXXXXXXXXXXXXXXXXG----MAHKILEYRETLPDQLKSTLVSVLDAHR 56
           MAPE+ +THEA                     M+HKILE+R TLPDQLKSTL+SVL++ R
Sbjct: 1   MAPEISKTHEAFRSSEDSDSEELERLESDLKEMSHKILEFRSTLPDQLKSTLLSVLESQR 60

Query: 57  PLLPQLNPGASEQNISREESSSAPEDPETAXXXXXXXXXISSNCSAMPIVLNRMKDCIAK 116
           P LPQ N GAS+QNISRE SSS  EDPE+A         ISSNC+AMPIVL RMKDCIAK
Sbjct: 61  PFLPQFNSGASDQNISREGSSSTAEDPESAEKVKLLKEKISSNCAAMPIVLKRMKDCIAK 120

Query: 117 IDKLDSYNAASIHPAFKKKNTG 138
           I+KLDSYNAA+IH  FK+K TG
Sbjct: 121 IEKLDSYNAANIHQGFKRKKTG 142