Miyakogusa Predicted Gene

Lj1g3v2627530.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2627530.1 Non Characterized Hit- tr|I3S582|I3S582_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,91.43,0,no
description,HAD-like domain; PMM,Eukaryotic phosphomannomutase;
HAD-like,HAD-like domain;
HAD-SF-,NODE_58623_length_1103_cov_76.969177.path2.1
         (247 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g076670.1 | phosphomannomutase A1 | HC | chr7:28891281-288...   469   e-132
Medtr7g076670.2 | phosphomannomutase A1 | HC | chr7:28891351-288...   460   e-130
Medtr7g076670.3 | phosphomannomutase A1 | HC | chr7:28891351-288...   403   e-113

>Medtr7g076670.1 | phosphomannomutase A1 | HC |
           chr7:28891281-28895371 | 20130731
          Length = 247

 Score =  469 bits (1206), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 226/245 (92%), Positives = 232/245 (94%)

Query: 1   MAVAKPGVIALFDVDGTLTAPRKVANSEMLGFMQELRKVVTVGVVGGSDLIKISEQLGST 60
           MA   PGV+ALFDVDGTLTAPRK    EML FMQ+LRK VTVGVVGGSDL+KISEQLG T
Sbjct: 1   MASLNPGVLALFDVDGTLTAPRKGVTPEMLKFMQDLRKFVTVGVVGGSDLVKISEQLGQT 60

Query: 61  VTHDYDYVFSENGLVAHKQGKLIGTESLKTFLGDEKLKEFINFTLHYIADLDIPIKRGTF 120
           VT DYDYVFSENGLVAHKQGKLIGT+SLKTF+GDEKLKEFINFTLHYIADLDIPIKRGTF
Sbjct: 61  VTTDYDYVFSENGLVAHKQGKLIGTQSLKTFVGDEKLKEFINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIR KMVS+LREKFAHLNLTFSIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRSKMVSILREKFAHLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC 240
           FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC
Sbjct: 181 FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC 240

Query: 241 KSLFL 245
            SLFL
Sbjct: 241 TSLFL 245


>Medtr7g076670.2 | phosphomannomutase A1 | HC |
           chr7:28891351-28895345 | 20130731
          Length = 245

 Score =  460 bits (1183), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/245 (91%), Positives = 230/245 (93%), Gaps = 2/245 (0%)

Query: 1   MAVAKPGVIALFDVDGTLTAPRKVANSEMLGFMQELRKVVTVGVVGGSDLIKISEQLGST 60
           MA   PGV+ALFDVDGTLTAPRK    EML FMQ+LRK VTVGVVGGSDL+KISEQLG T
Sbjct: 1   MASLNPGVLALFDVDGTLTAPRKGVTPEMLKFMQDLRKFVTVGVVGGSDLVKISEQLGQT 60

Query: 61  VTHDYDYVFSENGLVAHKQGKLIGTESLKTFLGDEKLKEFINFTLHYIADLDIPIKRGTF 120
           VT DYDYVFSENGLVAHKQGKLIGT+SLKTF+GDEKLKEFINFTLHYIADLDIPIKRGTF
Sbjct: 61  VTTDYDYVFSENGLVAHKQGKLIGTQSLKTFVGDEKLKEFINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLNVSPIGRNCSQEERDEFEKYDK  NIR KMVS+LREKFAHLNLTFSIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDK--NIRSKMVSILREKFAHLNLTFSIGGQIS 178

Query: 181 FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC 240
           FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC
Sbjct: 179 FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC 238

Query: 241 KSLFL 245
            SLFL
Sbjct: 239 TSLFL 243


>Medtr7g076670.3 | phosphomannomutase A1 | HC |
           chr7:28891351-28895371 | 20130731
          Length = 215

 Score =  403 bits (1035), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/212 (91%), Positives = 200/212 (94%)

Query: 1   MAVAKPGVIALFDVDGTLTAPRKVANSEMLGFMQELRKVVTVGVVGGSDLIKISEQLGST 60
           MA   PGV+ALFDVDGTLTAPRK    EML FMQ+LRK VTVGVVGGSDL+KISEQLG T
Sbjct: 1   MASLNPGVLALFDVDGTLTAPRKGVTPEMLKFMQDLRKFVTVGVVGGSDLVKISEQLGQT 60

Query: 61  VTHDYDYVFSENGLVAHKQGKLIGTESLKTFLGDEKLKEFINFTLHYIADLDIPIKRGTF 120
           VT DYDYVFSENGLVAHKQGKLIGT+SLKTF+GDEKLKEFINFTLHYIADLDIPIKRGTF
Sbjct: 61  VTTDYDYVFSENGLVAHKQGKLIGTQSLKTFVGDEKLKEFINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIR KMVS+LREKFAHLNLTFSIGGQIS
Sbjct: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRSKMVSILREKFAHLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYK 212
           FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYK
Sbjct: 181 FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYK 212