Miyakogusa Predicted Gene
- Lj1g3v2610280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2610280.1 Non Characterized Hit- tr|I3S7C7|I3S7C7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,86.59,0,ATP-DEPENDENT RNA HELICASE,NULL; OB_NTP_bind,Domain of
unknown function DUF1605,CUFF.29257.1
(187 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 300 4e-82
Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 300 4e-82
Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 300 4e-82
Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 274 3e-74
Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 273 5e-74
Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 176 1e-44
Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:51... 165 3e-41
Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 163 7e-41
Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 163 7e-41
Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 139 2e-33
Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC | chr2:4... 134 7e-32
Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 129 1e-30
Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 128 4e-30
Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 127 6e-30
Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 124 4e-29
Medtr1g010030.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 115 2e-26
Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC | chr7:3... 114 4e-26
Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein |... 114 7e-26
Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 95 5e-20
Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA hel... 94 5e-20
Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 83 2e-16
Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC | c... 65 5e-11
Medtr1g056490.1 | ATP-dependent RNA helicase | HC | chr1:2472920... 64 8e-11
Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA hel... 61 5e-10
Medtr0267s0070.1 | NB-ARC domain disease resistance protein, put... 61 8e-10
Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC | c... 60 1e-09
Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein ... 58 4e-09
Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein ... 58 4e-09
Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein ... 53 1e-07
Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein ... 53 1e-07
Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein ... 53 1e-07
Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein ... 53 1e-07
Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein ... 53 1e-07
Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein ... 53 2e-07
Medtr8g045110.1 | ATP-dependent RNA helicase A-like protein | HC... 52 2e-07
>Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 300 bits (769), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 133/164 (81%), Positives = 154/164 (93%)
Query: 1 MNFHTGNVGDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGI 60
+NFHTGNVGDH+ALL++YNSWKE NYS QWCYENYIQVRSMK+ARDIRDQLAGLLERV I
Sbjct: 881 LNFHTGNVGDHMALLKVYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEI 940
Query: 61 KLTSNPNDLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVY 120
+LT+NPNDL+AI+KSITSGFFPHS++LQKNGSYRT+K Q V IHPSSG+AQV P+WVVY
Sbjct: 941 ELTTNPNDLDAIKKSITSGFFPHSSKLQKNGSYRTLKHGQTVHIHPSSGLAQVLPKWVVY 1000
Query: 121 YELVLTTKEYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKKIP 164
+ELVLTTKEYMRQ+TE+K EWL+E+APHYYQLKDVED+ SKK+P
Sbjct: 1001 HELVLTTKEYMRQITELKAEWLLEIAPHYYQLKDVEDTGSKKMP 1044
>Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 300 bits (769), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 133/164 (81%), Positives = 154/164 (93%)
Query: 1 MNFHTGNVGDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGI 60
+NFHTGNVGDH+ALL++YNSWKE NYS QWCYENYIQVRSMK+ARDIRDQLAGLLERV I
Sbjct: 881 LNFHTGNVGDHMALLKVYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEI 940
Query: 61 KLTSNPNDLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVY 120
+LT+NPNDL+AI+KSITSGFFPHS++LQKNGSYRT+K Q V IHPSSG+AQV P+WVVY
Sbjct: 941 ELTTNPNDLDAIKKSITSGFFPHSSKLQKNGSYRTLKHGQTVHIHPSSGLAQVLPKWVVY 1000
Query: 121 YELVLTTKEYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKKIP 164
+ELVLTTKEYMRQ+TE+K EWL+E+APHYYQLKDVED+ SKK+P
Sbjct: 1001 HELVLTTKEYMRQITELKAEWLLEIAPHYYQLKDVEDTGSKKMP 1044
>Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 300 bits (769), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 133/164 (81%), Positives = 154/164 (93%)
Query: 1 MNFHTGNVGDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGI 60
+NFHTGNVGDH+ALL++YNSWKE NYS QWCYENYIQVRSMK+ARDIRDQLAGLLERV I
Sbjct: 881 LNFHTGNVGDHMALLKVYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEI 940
Query: 61 KLTSNPNDLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVY 120
+LT+NPNDL+AI+KSITSGFFPHS++LQKNGSYRT+K Q V IHPSSG+AQV P+WVVY
Sbjct: 941 ELTTNPNDLDAIKKSITSGFFPHSSKLQKNGSYRTLKHGQTVHIHPSSGLAQVLPKWVVY 1000
Query: 121 YELVLTTKEYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKKIP 164
+ELVLTTKEYMRQ+TE+K EWL+E+APHYYQLKDVED+ SKK+P
Sbjct: 1001 HELVLTTKEYMRQITELKAEWLLEIAPHYYQLKDVEDTGSKKMP 1044
>Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr5:31994096-31996650 | 20130731
Length = 808
Score = 274 bits (701), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 125/164 (76%), Positives = 147/164 (89%)
Query: 1 MNFHTGNVGDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGI 60
MNFHTG+VGDHIA L+++NSWKE NYS QWC+ENY+QVRSMK+ARDIRDQLAGLLERV I
Sbjct: 638 MNFHTGDVGDHIAHLKVFNSWKEANYSTQWCFENYVQVRSMKRARDIRDQLAGLLERVEI 697
Query: 61 KLTSNPNDLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVY 120
+LTSNPN+L+AIRKSI SGFFP+SA+LQK+G+YR K Q V IHPSSG+A+V PR V+Y
Sbjct: 698 ELTSNPNNLDAIRKSILSGFFPNSAKLQKDGTYRRFKHLQTVHIHPSSGMAEVIPRLVLY 757
Query: 121 YELVLTTKEYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKKIP 164
+ELVLTTKEYMRQVTEIKPEWL+E+APH Y KDV DS+SKK+P
Sbjct: 758 HELVLTTKEYMRQVTEIKPEWLLEIAPHCYDPKDVGDSSSKKMP 801
>Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 904
Score = 273 bits (699), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 125/174 (71%), Positives = 152/174 (87%)
Query: 1 MNFHTGNVGDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGI 60
MNFHTGNVGDHIA L +YNSWKE+NYSRQWCYENYIQVRSMK+A+DIRDQL GLLER+ I
Sbjct: 726 MNFHTGNVGDHIAHLNVYNSWKESNYSRQWCYENYIQVRSMKRAKDIRDQLVGLLERIEI 785
Query: 61 KLTSNPNDLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVY 120
+LTSN NDL+AI+KSITSGFFP++A+LQK G+Y+ VK Q IHPSSG+A+VFPR V+Y
Sbjct: 786 ELTSNSNDLDAIKKSITSGFFPNTAKLQKYGTYQMVKRLQTGHIHPSSGLAEVFPRLVLY 845
Query: 121 YELVLTTKEYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKKIPVDKDVQNRSS 174
+ELVLTTKEY+RQVTEIKPEWL+E+AP++Y KDVED +SKK+P + +S+
Sbjct: 846 HELVLTTKEYLRQVTEIKPEWLLEIAPNFYNPKDVEDLSSKKMPRGSGLAGKSA 899
>Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr8:15840782-15843798 | 20130731
Length = 650
Score = 176 bits (445), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 111/164 (67%), Gaps = 34/164 (20%)
Query: 1 MNFHTGNVGDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGI 60
MNFHTG+VGDHIA L++Y++WK+ NYS +WCYENYIQVRSMK+ARDIRDQL GLL++V I
Sbjct: 482 MNFHTGDVGDHIAHLKVYSTWKQANYSTRWCYENYIQVRSMKRARDIRDQLLGLLDKVDI 541
Query: 61 KLTSNPNDLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVY 120
+L SN NDL LQK+G+YR VK Q V IHPSSG+A+V PR V+Y
Sbjct: 542 ELISNSNDL----------------VLQKSGTYRRVKHLQTVHIHPSSGMAEVVPRLVLY 585
Query: 121 YELVLTTKEYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKKIP 164
+ELVLTTKE M P Y +EDS+SKKIP
Sbjct: 586 HELVLTTKECM--------------IPRTY----IEDSSSKKIP 611
>Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:51667204-51673502 | 20130731
Length = 1154
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 108/154 (70%)
Query: 9 GDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGIKLTSNPND 68
GDH+ LL +Y SWK N+S WC+EN++Q RS+++A+D+R QL ++++ + + S +
Sbjct: 976 GDHLTLLAVYESWKSKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDIVSAGKN 1035
Query: 69 LNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVYYELVLTTK 128
+ IRK+IT+GFF H+A+ YRT+ Q V IHPSS + Q P WV+Y+ELV+TTK
Sbjct: 1036 FSKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTK 1095
Query: 129 EYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKK 162
EYMR+VT I P+WLVELAP ++++ D + +K
Sbjct: 1096 EYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1129
>Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 163 bits (413), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 107/154 (69%)
Query: 9 GDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGIKLTSNPND 68
GDH+ LL +Y SWK N+S WC+EN++Q RS+++A+D+R QL ++++ + + S +
Sbjct: 1045 GDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKN 1104
Query: 69 LNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVYYELVLTTK 128
IRK+IT+GFF H+A+ YRT+ Q V IHPSS + Q P WV+Y+ELV+TTK
Sbjct: 1105 FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTK 1164
Query: 129 EYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKK 162
EYMR+VT I P+WLVELAP ++++ D + +K
Sbjct: 1165 EYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1198
>Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 163 bits (413), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 107/154 (69%)
Query: 9 GDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGIKLTSNPND 68
GDH+ LL +Y SWK N+S WC+EN++Q RS+++A+D+R QL ++++ + + S +
Sbjct: 1045 GDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKN 1104
Query: 69 LNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVYYELVLTTK 128
IRK+IT+GFF H+A+ YRT+ Q V IHPSS + Q P WV+Y+ELV+TTK
Sbjct: 1105 FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTK 1164
Query: 129 EYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKK 162
EYMR+VT I P+WLVELAP ++++ D + +K
Sbjct: 1165 EYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 1198
>Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr1:38781865-38776805 | 20130731
Length = 721
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 104/161 (64%), Gaps = 9/161 (5%)
Query: 9 GDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGIKLTSNPND 68
GDH+ LL +Y+++K+NN WCY+N++ R++K A ++R QL ++ R +KL S D
Sbjct: 545 GDHLTLLNVYHAYKQNNEDASWCYDNFVNNRALKSADNVRQQLVRIMARFNLKLCS--TD 602
Query: 69 LNA------IRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVYYE 122
N+ IRK++ +G+F A L++ G Y TVK Q V +HPS+ + P WV+Y E
Sbjct: 603 FNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHK-PEWVIYNE 661
Query: 123 LVLTTKEYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKKI 163
VLT++ ++R VT+I+ EWLV++APHYY L + +K++
Sbjct: 662 YVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCEAKRV 702
>Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC |
chr2:4513881-4525364 | 20130731
Length = 701
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 100/148 (67%), Gaps = 3/148 (2%)
Query: 9 GDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGIKLTSNPND 68
GDH+ L +Y + ++ S QWC++N++ +MK+ ++R+QL + +R+G+ L S +D
Sbjct: 548 GDHVTFLNVYKGFHQSRKSSQWCHKNFVNYHAMKKVLEVREQLRRIAQRIGLVLKSCESD 607
Query: 69 LNAIRKSITSGFFPHSAQLQ---KNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVYYELVL 125
+ ++K++ +GFF ++ +L+ +G Y+T++ + V IHPSS + +V P+WV++ LV
Sbjct: 608 MQVVKKAVIAGFFANACRLEPYSPDGMYKTLRGSEEVYIHPSSVLFRVNPKWVIFNSLVS 667
Query: 126 TTKEYMRQVTEIKPEWLVELAPHYYQLK 153
T ++YMR V I P WL+E APH+Y+L+
Sbjct: 668 TDRKYMRNVMTIDPSWLLEAAPHFYKLQ 695
>Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr4:33389635-33387508 | 20130731
Length = 683
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 102/159 (64%), Gaps = 5/159 (3%)
Query: 9 GDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGIKLTS---N 65
GDH+ LL +Y+++K+NN WCYEN++ R++K A ++R QL ++ R +KL S N
Sbjct: 507 GDHLTLLNVYHAYKQNNEDPSWCYENFVNHRALKSADNVRQQLVRIMARFNLKLCSTYFN 566
Query: 66 PNDLNA-IRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVYYELV 124
D I+K++ +G+F A L++ G Y TVK Q V++HPS+ + P WV+Y E V
Sbjct: 567 SRDYYVNIKKAMLAGYFMQVAHLERTGHYLTVKDNQMVQLHPSNCLDPK-PEWVIYNEYV 625
Query: 125 LTTKEYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKKI 163
T+ ++R VT+I+ +WLV++AP+YY L + +K++
Sbjct: 626 FTSDNFIRTVTDIRGDWLVDIAPNYYDLSNFPRCEAKQV 664
>Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:20814127-20817509 | 20130731
Length = 715
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 97/151 (64%), Gaps = 10/151 (6%)
Query: 9 GDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGIKLTSNPND 68
GDH+ LL +Y+++K+NN WCY+N+I R +K A ++R QL ++ R +KL S D
Sbjct: 568 GDHLTLLNVYHAYKQNNEDASWCYDNFINYRVLKSADNVRQQLVRIMARFNLKLCS--TD 625
Query: 69 LNA------IRKSITSGFFPHSAQL-QKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVYY 121
N+ IRK++ +G+F A Q+ G Y TVK +Q V +HPS+ + P WV+Y
Sbjct: 626 FNSRHYYVNIRKTMLAGYFMQVAHFDQQRGRYLTVKDKQEVYLHPSNCLDHK-PEWVIYN 684
Query: 122 ELVLTTKEYMRQVTEIKPEWLVELAPHYYQL 152
E VLT++ ++R V +I+ EWLV++APHY+ L
Sbjct: 685 EYVLTSRHFIRTVMDIRGEWLVDIAPHYHDL 715
>Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr2:42091662-42101447 | 20130731
Length = 1269
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Query: 10 DHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGIKLTSNPNDL 69
DH+ L +Y WK+++Y WC ++++ V+ +++AR++R QL +L+ + I LT+ D
Sbjct: 1051 DHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTTCFPDT 1110
Query: 70 NAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGV--AQVFPRWVVYYELVLTT 127
+ +RK+I S +F +SA+L+ G Y + +HPSS + P +VVY+EL+LTT
Sbjct: 1111 DVVRKAICSAYFHNSARLKGVGEYVNTRNGMPCHLHPSSALYGMGCTPDYVVYHELILTT 1170
Query: 128 KEYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKKIPVDKDVQNRSSKMIWEEEGKNV 185
KEYM+ T ++P+W+ EL P ++ +K+ + S ++ + + K EEE +N+
Sbjct: 1171 KEYMQCATAVEPQWMAELGPMFFSVKESDTSL-----LEHKKKQKREKTAMEEEMENL 1223
>Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16 | HC | chr3:21592985-21589785 | 20130731
Length = 1066
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 102/173 (58%), Gaps = 6/173 (3%)
Query: 10 DHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGIKLTSNPNDL 69
DH+ L +Y WK+++Y WC ++++ V+ +++AR++R QL +L+ + I LT+ D
Sbjct: 848 DHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTTCFPDT 907
Query: 70 NAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGV--AQVFPRWVVYYELVLTT 127
+ +RK+I S +F +SA+L G Y + +HPSS + P +VVY+EL+LTT
Sbjct: 908 DVVRKAICSAYFHNSARLMGVGEYVNTRNGMPCYLHPSSALYGMGCTPEYVVYHELILTT 967
Query: 128 KEYMRQVTEIKPEWLVELAPHYYQLKDVEDSTSKKIPVDKDVQNRSSKMIWEE 180
KEYM+ T ++P+W+ EL P ++ + + + S + K Q R I EE
Sbjct: 968 KEYMQCATAVEPKWMAELGPMFFSVTESDTSLMEH----KKKQKREKTAIEEE 1016
>Medtr1g010030.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16, putative | HC | chr1:1700852-1690934 |
20130731
Length = 516
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 7/86 (8%)
Query: 79 GFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVFPRWVVYYELVLTTKEYMRQVTEIK 138
GFFPH+A+LQKNGSY T+K Q V IHPSSG+AQV PR VVY+ELVLTTKEYMRQ+TE+K
Sbjct: 424 GFFPHTAKLQKNGSYWTLKHVQTVDIHPSSGLAQVRPRCVVYHELVLTTKEYMRQITELK 483
Query: 139 PEWLVELAPHYYQLKDVEDSTSKKIP 164
+WL+ Q D+ED+ SKK+P
Sbjct: 484 SQWLL-------QPNDLEDTISKKMP 502
>Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC |
chr7:38011601-38003021 | 20130731
Length = 725
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 92/160 (57%), Gaps = 14/160 (8%)
Query: 9 GDHIALLRMY--------------NSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGL 54
GDHI L+ +Y N K R+WC EN+I RS++ ARDI Q+ G
Sbjct: 566 GDHITLINVYRAATDFLEKRTIETNKTKNEKDFRKWCKENFINSRSLRHARDIHRQIQGH 625
Query: 55 LERVGIKLTSNPNDLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVF 114
++++G+KL S D+ R+ + + FF ++A Q +G+YR + Q V+IHPSS + +
Sbjct: 626 VQQMGLKLASCGEDMLQFRRCLVASFFLNAAVKQPDGTYRALASGQVVQIHPSSVLFRKK 685
Query: 115 PRWVVYYELVLTTKEYMRQVTEIKPEWLVELAPHYYQLKD 154
P +++ EL+ T +Y+R +T + WL ELAP +Y +++
Sbjct: 686 PECIIFNELIQTNNKYVRDLTRVDNLWLTELAPQFYAMQN 725
>Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein | HC
| chr4:39455746-39462206 | 20130731
Length = 519
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 92/160 (57%), Gaps = 14/160 (8%)
Query: 9 GDHIALLRMY--------------NSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGL 54
GDHI L+ ++ N K R+WC EN+I RS++ ARDI Q+ G
Sbjct: 360 GDHITLINVFRAATDLLEKRTIEINKMKNEKDFRKWCKENFINSRSLRHARDIHRQIQGH 419
Query: 55 LERVGIKLTSNPNDLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQVF 114
++++G+KL S D+ R+ + + FF ++A Q +G+YR + Q V+IHPSS + +
Sbjct: 420 VQQMGLKLASCGEDMLQFRRCLVASFFLNAAVKQPDGTYRALASGQVVQIHPSSVLFRKK 479
Query: 115 PRWVVYYELVLTTKEYMRQVTEIKPEWLVELAPHYYQLKD 154
P +++ EL+ T +Y+R +T + WL ELAP +Y +++
Sbjct: 480 PECIIFNELIQTNNKYVRDLTRVDNLWLTELAPQFYAMQN 519
>Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490015-34479594 | 20130731
Length = 697
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 90/155 (58%), Gaps = 17/155 (10%)
Query: 7 NVGDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERV-----GIK 61
+GDHI LL+++ W + +Y WC ++ +QVR M ARD+R QL+ +++++ GI+
Sbjct: 481 GLGDHIQLLQIFERWHQTDYDIGWCKDHGLQVRGMSFARDVRKQLSQIMQKIAKEPLGIR 540
Query: 62 LTSNPN----DLNAIRKSITSGFFPHSAQ--LQKNGSYRTVKLQ-QNVRIHPSSGVAQ-- 112
D +RK++ G+ A+ + NG YRT+ Q Q V++HPSS ++
Sbjct: 541 TNGKGEEIRRDYRNLRKALCVGYANQLAERKMHHNG-YRTLGFQGQVVQVHPSSALSSDE 599
Query: 113 --VFPRWVVYYELVLTTKEYMRQVTEIKPEWLVEL 145
FP +VVY+EL+ T + +MR V ++ +W++ +
Sbjct: 600 FGKFPDYVVYHELIATPRPFMRNVCSVEMKWVIPI 634
>Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34489993-34479594 | 20130731
Length = 647
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 90/155 (58%), Gaps = 17/155 (10%)
Query: 7 NVGDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERV-----GIK 61
+GDHI LL+++ W + +Y WC ++ +QVR M ARD+R QL+ +++++ GI+
Sbjct: 481 GLGDHIQLLQIFERWHQTDYDIGWCKDHGLQVRGMSFARDVRKQLSQIMQKIAKEPLGIR 540
Query: 62 LTSNPN----DLNAIRKSITSGFFPHSAQ--LQKNGSYRTVKLQ-QNVRIHPSSGVAQ-- 112
D +RK++ G+ A+ + NG YRT+ Q Q V++HPSS ++
Sbjct: 541 TNGKGEEIRRDYRNLRKALCVGYANQLAERKMHHNG-YRTLGFQGQVVQVHPSSALSSDE 599
Query: 113 --VFPRWVVYYELVLTTKEYMRQVTEIKPEWLVEL 145
FP +VVY+EL+ T + +MR V ++ +W++ +
Sbjct: 600 FGKFPDYVVYHELIATPRPFMRNVCSVEMKWVIPI 634
>Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 768
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 37/40 (92%)
Query: 1 MNFHTGNVGDHIALLRMYNSWKENNYSRQWCYENYIQVRS 40
MNFHTGNVGDHIA L +YNSWKE+NYSRQWCYENYIQ+ S
Sbjct: 726 MNFHTGNVGDHIAHLNVYNSWKESNYSRQWCYENYIQMPS 765
>Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC |
chr3:39323283-39316838 | 20130731
Length = 1718
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 9 GDHIALLRMYNSWKENNYSR--QWCYENYIQVRSMKQARDIRDQLAGLLERV-GIKLTS- 64
GD LL +Y W+ R +WC+EN I + M++ +D +L LER G + S
Sbjct: 747 GDLFTLLSVYKEWEAQPRDRRNKWCWENSINAKCMRRCQDTVLELESFLEREHGFVVPSY 806
Query: 65 ---NPNDLNA----IRKSITSGFFPHSAQLQ-KNGSYRTVKLQQNVRIHPSSGVAQVF-- 114
NP+ + ++K I S + A +N Y + Q+V++HPSS + VF
Sbjct: 807 WRWNPHTPSVHDKNLKKVILSSLAENVAMFSGRNQLYEVAQTGQHVQLHPSSSLL-VFAQ 865
Query: 115 -PRWVVYYELVLTTKEYMRQVTEIKPEWLVELAP 147
P WVV+ EL+ + EY+ V+ + + L L P
Sbjct: 866 RPSWVVFGELLSVSNEYLVCVSAVDFQLLYSLQP 899
>Medtr1g056490.1 | ATP-dependent RNA helicase | HC |
chr1:24729204-24739293 | 20130731
Length = 999
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 3 FHTGNVGDHIALLRMYNSWKENNY---SRQWCYENYIQVRSMKQARDIRDQLAGLLERVG 59
F + DH+AL+ + WK+ + +C+EN++ +++ D+R Q LL +G
Sbjct: 766 FACDSRSDHLALVEAFEEWKDAKSRGDEKNFCWENFLSPATLRLIDDMRTQFLNLLSDIG 825
Query: 60 IKLTSN--------PNDLNAIRKSITSGFFPHSAQLQKNGSYRTV---KLQQNVRIHPSS 108
S +DL + + +G +P+ Q ++ G +RT K V IHPSS
Sbjct: 826 FVDKSKGVQAYNQQSHDLEMVCAILCAGLYPNVVQCKRRG-HRTAFYTKEAGKVDIHPSS 884
Query: 109 GVAQV--FPR-WVVYYELVLTTKEYMRQVTEI 137
A V FP ++VY E V TT Y+R T I
Sbjct: 885 VNAGVHSFPLPYLVYSEKVKTTSIYIRDSTNI 916
>Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490000-34479591 | 20130731
Length = 589
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 12/107 (11%)
Query: 7 NVGDHIALLRMYNSWKENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERV-----GIK 61
+GDHI LL+++ W + +Y WC ++ +QVR M ARD+R QL+ +++++ GI+
Sbjct: 481 GLGDHIQLLQIFERWHQTDYDIGWCKDHGLQVRGMSFARDVRKQLSQIMQKIAKEPLGIR 540
Query: 62 LTSNPN----DLNAIRKSITSGFFPHSAQ--LQKNGSYRTVKLQQNV 102
D +RK++ G+ A+ + NG YRT+ Q V
Sbjct: 541 TNGKGEEIRRDYRNLRKALCVGYANQLAERKMHHNG-YRTLGFQGQV 586
>Medtr0267s0070.1 | NB-ARC domain disease resistance protein, putative
| LC | scaffold0267:17737-24509 | 20130731
Length = 1982
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 21/157 (13%)
Query: 9 GDHIALLRMYNSW--KENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLE-RVGIKLTS- 64
GD LL +Y W + N+ +WC+EN I +SM++ ++ +L LE +G+ + S
Sbjct: 1401 GDLFTLLSVYMEWEVQPQNWKNKWCWENSINAKSMRRCQNTFLELESCLESELGLVVPSY 1460
Query: 65 ------NP-----NDLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQV 113
NP N AI S++ +S + Q Y + +++V++HPS + V
Sbjct: 1461 WRWDPHNPSIHDKNMKKAILSSLSENVAMYSGRNQLG--YIVAQTEKHVQLHPSCSLL-V 1517
Query: 114 F---PRWVVYYELVLTTKEYMRQVTEIKPEWLVELAP 147
F P WVV+YEL + EY+ V+ + + L L P
Sbjct: 1518 FSQRPSWVVFYELSSESNEYLFCVSAVDFQSLYSLKP 1554
>Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC |
chr3:3875260-3882505 | 20130731
Length = 1731
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 21/157 (13%)
Query: 9 GDHIALLRMYNSW--KENNYSRQWCYENYIQVRSMKQARDIRDQLAGLLE-RVGIKLTS- 64
GD LL +Y W + N+ +WC+EN I +SM++ ++ +L LE +G+ + S
Sbjct: 746 GDLFTLLSVYMEWEVQPQNWKNKWCWENSINAKSMRRCQNTFLELESCLESELGLVVPSY 805
Query: 65 ------NP-----NDLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQV 113
NP N AI S++ +S + Q Y + +++V++HPS + V
Sbjct: 806 WRWDPHNPSIHDKNMKKAILSSLSENVAMYSGRNQLG--YIVAQTEKHVQLHPSCSLL-V 862
Query: 114 F---PRWVVYYELVLTTKEYMRQVTEIKPEWLVELAP 147
F P WVV+YEL + EY+ V+ + + L L P
Sbjct: 863 FSQRPSWVVFYELRSESNEYLFCVSAVDFQSLYSLKP 899
>Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein | HC
| chr1:49342716-49360401 | 20130731
Length = 1222
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 4 HTGNVGDHIALLRMYNSWKE---NNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGI 60
+TG DH+AL+R Y WKE + ++C++N++ +SMK +R + GLL +G+
Sbjct: 868 YTGAYSDHLALVRAYAGWKEAEIDLVGYEYCWKNFLSFQSMKAIDALRREFIGLLTDIGL 927
Query: 61 KLTSNPN-------DLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQN--VRIHPSSGVA 111
+ SN D+N IR I G +P + N +K ++ V ++ +S A
Sbjct: 928 -VDSNTTSCDTWSYDVNLIRAVICYGLYPGICSVVHNEKSFALKTMEDGQVLLYSNSVNA 986
Query: 112 Q----VFPRWVVYYELVLTTKEYMRQVTEIKPEWLV 143
+ +P W+V+ E + ++R T + ++
Sbjct: 987 RETRIPYP-WLVFNEKIKVNSVFLRDSTAVSDSMML 1021
>Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein | HC
| chr1:49342716-49360105 | 20130731
Length = 1248
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 4 HTGNVGDHIALLRMYNSWKE---NNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVGI 60
+TG DH+AL+R Y WKE + ++C++N++ +SMK +R + GLL +G+
Sbjct: 868 YTGAYSDHLALVRAYAGWKEAEIDLVGYEYCWKNFLSFQSMKAIDALRREFIGLLTDIGL 927
Query: 61 KLTSNPN-------DLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQN--VRIHPSSGVA 111
+ SN D+N IR I G +P + N +K ++ V ++ +S A
Sbjct: 928 -VDSNTTSCDTWSYDVNLIRAVICYGLYPGICSVVHNEKSFALKTMEDGQVLLYSNSVNA 986
Query: 112 Q----VFPRWVVYYELVLTTKEYMRQVTEIKPEWLV 143
+ +P W+V+ E + ++R T + ++
Sbjct: 987 RETRIPYP-WLVFNEKIKVNSVFLRDSTAVSDSMML 1021
>Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 10 DHIALLRMYNSWKENNYSR---QWCYENYIQVRSMKQARDIRDQLAGLLERVGI----KL 62
DH+AL+R Y+ WK+ + ++C+ N++ ++++ +R Q LL+ +G+
Sbjct: 821 DHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLVGNNSE 880
Query: 63 TSN--PNDLNAIRKSITSGFFPHSAQL---QKNGSYRTVKLQQNVRIHPSS---GVAQVF 114
T+N N+ + +R I +G FP + + +K+ S +T++ Q V ++ +S VA++
Sbjct: 881 TNNKWSNEEHLLRAVICAGLFPGISSVVNKEKSISLKTMEDGQ-VLLYANSVNGSVAKIP 939
Query: 115 PRWVVYYELVLTTKEYMRQVTEIKPEWLV 143
W+V+ E + ++R T I L+
Sbjct: 940 YPWIVFNEKIKVNTVFLRDSTGISDSMLL 968
>Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 10 DHIALLRMYNSWKENNYSR---QWCYENYIQVRSMKQARDIRDQLAGLLERVGI----KL 62
DH+AL+R Y+ WK+ + ++C+ N++ ++++ +R Q LL+ +G+
Sbjct: 821 DHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLVGNNSE 880
Query: 63 TSN--PNDLNAIRKSITSGFFPHSAQL---QKNGSYRTVKLQQNVRIHPSS---GVAQVF 114
T+N N+ + +R I +G FP + + +K+ S +T++ Q V ++ +S VA++
Sbjct: 881 TNNKWSNEEHLLRAVICAGLFPGISSVVNKEKSISLKTMEDGQ-VLLYANSVNGSVAKIP 939
Query: 115 PRWVVYYELVLTTKEYMRQVTEIKPEWLV 143
W+V+ E + ++R T I L+
Sbjct: 940 YPWIVFNEKIKVNTVFLRDSTGISDSMLL 968
>Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 10 DHIALLRMYNSWKENNYSR---QWCYENYIQVRSMKQARDIRDQLAGLLERVGI----KL 62
DH+AL+R Y+ WK+ + ++C+ N++ ++++ +R Q LL+ +G+
Sbjct: 821 DHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLVGNNSE 880
Query: 63 TSN--PNDLNAIRKSITSGFFPHSAQL---QKNGSYRTVKLQQNVRIHPSS---GVAQVF 114
T+N N+ + +R I +G FP + + +K+ S +T++ Q V ++ +S VA++
Sbjct: 881 TNNKWSNEEHLLRAVICAGLFPGISSVVNKEKSISLKTMEDGQ-VLLYANSVNGSVAKIP 939
Query: 115 PRWVVYYELVLTTKEYMRQVTEIKPEWLV 143
W+V+ E + ++R T I L+
Sbjct: 940 YPWIVFNEKIKVNTVFLRDSTGISDSMLL 968
>Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 10 DHIALLRMYNSWKENNYSR---QWCYENYIQVRSMKQARDIRDQLAGLLERVGI----KL 62
DH+AL+R Y+ WK+ + ++C+ N++ ++++ +R Q LL+ +G+
Sbjct: 821 DHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLVGNNSE 880
Query: 63 TSN--PNDLNAIRKSITSGFFPHSAQL---QKNGSYRTVKLQQNVRIHPSS---GVAQVF 114
T+N N+ + +R I +G FP + + +K+ S +T++ Q V ++ +S VA++
Sbjct: 881 TNNKWSNEEHLLRAVICAGLFPGISSVVNKEKSISLKTMEDGQ-VLLYANSVNGSVAKIP 939
Query: 115 PRWVVYYELVLTTKEYMRQVTEIKPEWLV 143
W+V+ E + ++R T I L+
Sbjct: 940 YPWIVFNEKIKVNTVFLRDSTGISDSMLL 968
>Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 10 DHIALLRMYNSWKENNYSR---QWCYENYIQVRSMKQARDIRDQLAGLLERVGI----KL 62
DH+AL+R Y+ WK+ + ++C+ N++ ++++ +R Q LL+ +G+
Sbjct: 821 DHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLVGNNSE 880
Query: 63 TSN--PNDLNAIRKSITSGFFPHSAQL---QKNGSYRTVKLQQNVRIHPSS---GVAQVF 114
T+N N+ + +R I +G FP + + +K+ S +T++ Q V ++ +S VA++
Sbjct: 881 TNNKWSNEEHLLRAVICAGLFPGISSVVNKEKSISLKTMEDGQ-VLLYANSVNGSVAKIP 939
Query: 115 PRWVVYYELVLTTKEYMRQVTEIKPEWLV 143
W+V+ E + ++R T I L+
Sbjct: 940 YPWIVFNEKIKVNTVFLRDSTGISDSMLL 968
>Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:16995201-16976389 | 20130731
Length = 1148
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 3 FHTGNVGDHIALLRMYNSWKE---NNYSRQWCYENYIQVRSMKQARDIRDQLAGLLERVG 59
F + DH+AL+R Y WK+ + ++C+ N++ ++++ +R Q + +L+ G
Sbjct: 789 FSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQFSFILKEAG 848
Query: 60 I---------KLTSNPNDLNAIRKSITSGFFPHSAQL---QKNGSYRTVKLQQNVRIHPS 107
+ KL+ N + +R I SG FP A + + + S++T+ Q V ++ +
Sbjct: 849 LVDTDASINNKLSHNQ---SLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQ-VLLYAN 904
Query: 108 SGVA--QVFP-RWVVYYELVLTTKEYMRQVTEIKPEWLV 143
S A Q P W+V+ E V ++R T + L+
Sbjct: 905 SVNARYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILI 943
>Medtr8g045110.1 | ATP-dependent RNA helicase A-like protein | HC |
chr8:17594404-17602720 | 20130731
Length = 630
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 3 FHTGNVGDHIALLRMYNSWKENNYSRQ---WCYENYIQVRSMKQARDIRDQLAGLLERVG 59
F + DH+ +R Y WK+ R +C+ N++ +++ + IR QL+ +L+ G
Sbjct: 375 FSANDYSDHMVFVRAYEGWKDAKRERSDYNYCWRNFLSSQTLHEIHSIRKQLSSILKETG 434
Query: 60 IKLTS---NPN---DLNAIRKSITSGFFPHSAQLQKNGSYRTVKLQQNVRIHPSSGVAQV 113
+ T N N D + +R I SG FP A + + S +T+ + S Q
Sbjct: 435 LLDTDASINNNLSIDQSLVRAVICSGLFPCIASVNQE-SIKTMDDGYVLLAEISVNSKQT 493
Query: 114 FP-RWVVYYELVLTTKEYMRQVTEIKPEWLV 143
P W+V+ E V + +R T + L+
Sbjct: 494 IPYPWLVFNEKVKIKQVLIRDSTGVSDLMLI 524