Miyakogusa Predicted Gene

Lj1g3v2595920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2595920.1 tr|O64632|O64632_ARATH Expressed protein
OS=Arabidopsis thaliana GN=At2g45520 PE=2 SV=1,44.92,7e-19,seg,NULL;
coiled-coil,NULL,CUFF.29388.1
         (180 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g075640.1 | hypothetical protein | HC | chr7:28341999-2833...   147   7e-36

>Medtr7g075640.1 | hypothetical protein | HC |
           chr7:28341999-28338578 | 20130731
          Length = 215

 Score =  147 bits (370), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/183 (50%), Positives = 114/183 (62%), Gaps = 8/183 (4%)

Query: 1   MGGKGQRRREKNYKAAHGGYSGLPPPPVLSQLDALPSKLRQLISITRHQNGATAASELKK 60
           M GKG++RREKNY+AAHGG + LPPPP  SQLDALP KLRQ+++ T+HQN +   S+ KK
Sbjct: 1   MAGKGRKRREKNYRAAHGGSTALPPPPKSSQLDALPFKLRQIMNFTKHQNDSPGLSKDKK 60

Query: 61  KDDGHAQNV---DTSGQLKATQHSENGHEQLIPSSANDXXXXXXXXXEVKDLRFLAEMDK 117
            DDGH +NV   DTS QLKA QHS+   EQL   + ++         EVKDLRF  + DK
Sbjct: 61  FDDGHVKNVKQGDTSEQLKAPQHSD---EQLS-ENDDNKNKKKRKRKEVKDLRFALDEDK 116

Query: 118 TRSQLXXXXXXXXXXXXXXXXXXXXXXXXXLDFPGHEKIKFGDVVQAPPKLAAIPRAFKN 177
           T SQL                         L+FPG EKIKFGD+VQAPPKL+  P+ FK 
Sbjct: 117 TNSQL-KKKERKKKYEAKKKKHKKVEEDEILEFPGQEKIKFGDIVQAPPKLSFNPKGFKI 175

Query: 178 TQD 180
           +QD
Sbjct: 176 SQD 178