Miyakogusa Predicted Gene
- Lj1g3v2581040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2581040.1 Non Characterized Hit- tr|I3TAE6|I3TAE6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,43.36,2e-19,CORNICHON-RELATED,NULL;
Cornichon,Cornichon,CUFF.29202.1
(136 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g074930.1 | cornichon family protein | HC | chr7:28070017-... 134 4e-32
Medtr4g102010.1 | cornichon family protein | HC | chr4:42217413-... 128 1e-30
Medtr5g011690.1 | cornichon family protein | HC | chr5:3406410-3... 127 2e-30
Medtr5g011690.2 | cornichon family protein | HC | chr5:3406410-3... 127 2e-30
Medtr0311s0030.1 | cornichon family protein | HC | scaffold0311:... 103 6e-23
Medtr7g092530.1 | ER-derived vesicles protein ERV14 | HC | chr7:... 101 2e-22
Medtr0311s0030.2 | cornichon family protein | HC | scaffold0311:... 73 7e-14
>Medtr7g074930.1 | cornichon family protein | HC |
chr7:28070017-28072366 | 20130731
Length = 122
Score = 134 bits (336), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 87/106 (82%), Gaps = 3/106 (2%)
Query: 1 MAEVLYWISTFVLILTLLCMLGYQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFC 60
MAEVLYWISTFVLILTLL +LGYQLILLVDLEFDYINPYDSTSR+N V+LPEF+I+ IFC
Sbjct: 1 MAEVLYWISTFVLILTLLVLLGYQLILLVDLEFDYINPYDSTSRVNYVILPEFLIMAIFC 60
Query: 61 FTNLIAGHWFTFFLSLPCMYYNARLYFKREHLADVTEIYNKLKWEK 106
F NLIAGHWF F ++LPC+YYN + + ++ +E Y ++++
Sbjct: 61 FLNLIAGHWFIFLIALPCLYYNVSIIMRP---SNTSETYFDIEYQS 103
>Medtr4g102010.1 | cornichon family protein | HC |
chr4:42217413-42214878 | 20130731
Length = 137
Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 90/136 (66%)
Query: 1 MAEVLYWISTFVLILTLLCMLGYQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFC 60
MA++ W+ +F ++ L+ ++ YQL+ L DLEFDYINPYDS SRIN++VLPE+I + C
Sbjct: 1 MADIFAWLFSFFTLIALIVIIIYQLMCLADLEFDYINPYDSASRINKMVLPEYITVAALC 60
Query: 61 FTNLIAGHWFTFFLSLPCMYYNARLYFKREHLADVTEIYNKLKWEKNKRLFKVANLVIIF 120
L+ GHW L P +YYN RLY + +HL DVTEI+N L EK +RL K+ L+ I
Sbjct: 61 GFYLVTGHWVMALLCAPYLYYNYRLYSQGKHLVDVTEIFNMLAREKKQRLIKLFYLIFIL 120
Query: 121 VFSILSLVWTLTEDVH 136
S+ L++T +D +
Sbjct: 121 FLSLFWLIYTSLDDPY 136
>Medtr5g011690.1 | cornichon family protein | HC |
chr5:3406410-3404005 | 20130731
Length = 137
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 88/134 (65%)
Query: 1 MAEVLYWISTFVLILTLLCMLGYQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFC 60
M ++ W+ +F L++ LL ++ YQL+ L +LEFDY+NPYD + RIN V+LPEF I
Sbjct: 1 MVDLFGWLISFFLLIALLVLVTYQLMCLAELEFDYLNPYDFSKRINSVMLPEFYTQAILT 60
Query: 61 FTNLIAGHWFTFFLSLPCMYYNARLYFKREHLADVTEIYNKLKWEKNKRLFKVANLVIIF 120
LI GHW F LP +Y+N RLY +++HL DVTEI+N L WEK +RL K+ LV
Sbjct: 61 VFYLITGHWIMSFFCLPYLYFNFRLYRQKKHLIDVTEIFNMLAWEKKQRLVKLFYLVSTL 120
Query: 121 VFSILSLVWTLTED 134
FS+ +++T ED
Sbjct: 121 FFSVFWMIYTTLED 134
>Medtr5g011690.2 | cornichon family protein | HC |
chr5:3406410-3404005 | 20130731
Length = 137
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 88/134 (65%)
Query: 1 MAEVLYWISTFVLILTLLCMLGYQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFC 60
M ++ W+ +F L++ LL ++ YQL+ L +LEFDY+NPYD + RIN V+LPEF I
Sbjct: 1 MVDLFGWLISFFLLIALLVLVTYQLMCLAELEFDYLNPYDFSKRINSVMLPEFYTQAILT 60
Query: 61 FTNLIAGHWFTFFLSLPCMYYNARLYFKREHLADVTEIYNKLKWEKNKRLFKVANLVIIF 120
LI GHW F LP +Y+N RLY +++HL DVTEI+N L WEK +RL K+ LV
Sbjct: 61 VFYLITGHWIMSFFCLPYLYFNFRLYRQKKHLIDVTEIFNMLAWEKKQRLVKLFYLVSTL 120
Query: 121 VFSILSLVWTLTED 134
FS+ +++T ED
Sbjct: 121 FFSVFWMIYTTLED 134
>Medtr0311s0030.1 | cornichon family protein | HC |
scaffold0311:9983-15900 | 20130731
Length = 127
Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 69/102 (67%)
Query: 23 YQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFCFTNLIAGHWFTFFLSLPCMYYN 82
YQ+++L DLE DYINP++++SRIN +LPEFI G+ C L+ GHW F L++P Y+
Sbjct: 25 YQVLILSDLESDYINPFEASSRINYFILPEFIGQGVLCALCLLTGHWLMFLLNVPVTCYH 84
Query: 83 ARLYFKREHLADVTEIYNKLKWEKNKRLFKVANLVIIFVFSI 124
A LY KREHL DVTE++ L EK R+ K+ +I+ + I
Sbjct: 85 AMLYVKREHLIDVTEVFRVLSAEKKFRIAKLVLYLIVLIVVI 126
>Medtr7g092530.1 | ER-derived vesicles protein ERV14 | HC |
chr7:36697165-36690743 | 20130731
Length = 142
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 4/130 (3%)
Query: 3 EVLYWI-STFVLILTLLCMLGYQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFCF 61
++++W+ F L + L YQ+++L DLE DYINPYD++S+IN V+PEFI G+ C
Sbjct: 4 DLIFWLLICFPLNIAFLASAFYQVLMLSDLEADYINPYDASSKINYFVVPEFIGQGLLCA 63
Query: 62 TNLIAGHWFTFFLSLPCMYYNARLYFKREHLADVTEIYNKLKWEKNKRLFKVA---NLVI 118
L GHW F L LP Y+ LY KR+HL DVTE++ L EK R+ K+ LV+
Sbjct: 64 LFLFTGHWVMFLLMLPLASYHVMLYVKRQHLLDVTEVFRVLNAEKKFRIVKLTFYLTLVM 123
Query: 119 IFVFSILSLV 128
I +F ++ +V
Sbjct: 124 ITIFRLVLIV 133
>Medtr0311s0030.2 | cornichon family protein | HC |
scaffold0311:9876-14866 | 20130731
Length = 99
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 23 YQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFCFTNLIAGHWFTFFLSLPCMYYN 82
YQ+++L DLE DYINP++++SRIN +LPEFI G+ C L+ GHW F L++P Y+
Sbjct: 25 YQVLILSDLESDYINPFEASSRINYFILPEFIGQGVLCALCLLTGHWLMFLLNVPVTCYH 84
Query: 83 ARLYF 87
A L F
Sbjct: 85 AMLAF 89