Miyakogusa Predicted Gene
- Lj1g3v2559440.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2559440.1 Non Characterized Hit- tr|G7KZ72|G7KZ72_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,80.53,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.29171.1
(759 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g074290.1 | mediator of RNA polymerase II transcription su... 1203 0.0
Medtr7g074290.2 | mediator of RNA polymerase II transcription su... 790 0.0
Medtr2g021400.1 | mediator of RNA polymerase II transcription su... 466 e-131
Medtr2g105810.1 | mediator of RNA polymerase II transcription su... 411 e-114
Medtr7g094550.1 | mediator of RNA polymerase II transcription su... 397 e-110
Medtr7g056330.1 | mediator of RNA polymerase II transcription su... 123 9e-28
>Medtr7g074290.1 | mediator of RNA polymerase II transcription
subunit 33A | HC | chr7:27762202-27771907 | 20130731
Length = 1320
Score = 1203 bits (3113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/761 (77%), Positives = 651/761 (85%), Gaps = 9/761 (1%)
Query: 1 MCFE--KDHPSMWKFMSHALSSRLVFPLQILSLLSSKVIPRRRSHPHAYALFLPLLDQHV 58
MC E KDHPS WKF+ HALSS+L+FPLQ+LSLL+ KV R SHPHAYALFLPLLDQH
Sbjct: 58 MCSENVKDHPSTWKFLHHALSSKLIFPLQLLSLLAYKVFRNRFSHPHAYALFLPLLDQHA 117
Query: 59 FSFQPTGSVSCNLRIISSVDSSLQLSETYKIHDLELGHVFVLFFFNIIIALIDSTLDDWG 118
F+FQP SVSC+ +II SVDS L SET+KIHDLELGHVFVLF+FNIIIALIDSTL+DWG
Sbjct: 118 FNFQPIASVSCSNKIIKSVDSVLHFSETFKIHDLELGHVFVLFYFNIIIALIDSTLNDWG 177
Query: 119 LQVTFDERSCLVPTGDQYMEIDHNVTHNFKKSEYHEQIRKRNSFTALEVLERLTASRKAT 178
LQV F+ERSCLVPTGDQ+MEIDHN+THNFKK +Y EQIRKRN+ TALEVLERL+ ++KAT
Sbjct: 178 LQVNFNERSCLVPTGDQHMEIDHNMTHNFKKGDYREQIRKRNAITALEVLERLSENKKAT 237
Query: 179 ILLQSVLLNMPEKFNCLRQRLQFXXXXXXXXXXXXXVNPVLTKMSANIRGVSNFDYCLNK 238
ILLQSVLLNMPE FNCL QRLQF VN VL K+SA IRGVS+FDY LNK
Sbjct: 238 ILLQSVLLNMPENFNCLLQRLQFLESLDLASSELKVVNQVLRKVSAKIRGVSHFDYSLNK 297
Query: 239 HQLVGKLVDVGPCKTLLRYSYRSFQSPCWVPLDIYMENAMDSRQIPIKSSIDVLTEQIKT 298
HQ+VG VDVGPCKTLL+ +YRS CW+PLDIYMENAMDSRQIPIKS+I+VLTE IKT
Sbjct: 298 HQVVGISVDVGPCKTLLKCNYRS----CWIPLDIYMENAMDSRQIPIKSAIEVLTEGIKT 353
Query: 299 LQIINQASWQETFLALWLSALRLVQRERDPPEGPIPHLEARLCVLLSIVPLAIVNVLKED 358
LQI NQASW ETFLALWLSALRLVQRERDPPEGPIPHLEARLC+LLSIVPL IVNVL++D
Sbjct: 354 LQIFNQASWHETFLALWLSALRLVQRERDPPEGPIPHLEARLCMLLSIVPLVIVNVLRDD 413
Query: 359 SKHNPSSVQMSMESGYSHEMKNDGSGKLGLISSVEVLGHFSSLLCPPALVVDPANQAARK 418
++HN S+ +S+ S Y HEMK+D S KLGLISSV+VLGHFS LLCPPALVVD ANQAARK
Sbjct: 414 TEHNLSTAPVSVGSEYKHEMKSDLSMKLGLISSVQVLGHFSGLLCPPALVVDAANQAARK 473
Query: 419 AARFIYNSTNKNGEPVTGIHANSNTKAGGNLRHLIVEACIARNLMDTSVYFWPGYVXXXX 478
A+ FIYNS + GEP T I+AN+N+ AGGNLRHLIVEACIARNLMDTSVYFWPGYV
Sbjct: 474 ASSFIYNSMKEKGEPFTSINANANSNAGGNLRHLIVEACIARNLMDTSVYFWPGYVSTSV 533
Query: 479 XXXXXXXXXXXXPWLTFMEGTPLNNSLINSLTVTPASSLAEIEKLYFIALNGTEVERPAA 538
PWLTFMEGTPLNNSLIN+L TPASS+AEIEKLY+IAL+G+EVERP A
Sbjct: 534 MSLSDSTPLGKSPWLTFMEGTPLNNSLINALAATPASSIAEIEKLYYIALSGSEVERPTA 593
Query: 539 AKILCSASLSRGWYIQEHVVHYVVKLLASPVPLGHSGSWSLLVDNMSMLSAVLRGASSVD 598
AKILC ASLSRGWYIQEHVVHYVVKLLA PVP +SG+ L VDNMSM+SAVLRGASSVD
Sbjct: 594 AKILCGASLSRGWYIQEHVVHYVVKLLACPVPHSNSGTRGLFVDNMSMISAVLRGASSVD 653
Query: 599 TVHILSLHGVVPTVAASLLPLCEAFGSITPNSINTGDEPSTSTYMAYMAFSLAFLFLIRL 658
T+HILSLHGVVPTVAASLLPLCEAFGSI+P I+TGDE STS YMAFSLAFLFLIRL
Sbjct: 654 TLHILSLHGVVPTVAASLLPLCEAFGSISPTPISTGDESSTSV---YMAFSLAFLFLIRL 710
Query: 659 WKFCRPPLDQGITEEGIAVGGLEYLLSLHNNRVMSSQDKLESNQSLFESASVKPVCIDSF 718
WKFCRPPLDQ ITE GIAVGGLEYLLSLHNN VMSSQDK +SNQ+LF+SAS KPV IDSF
Sbjct: 711 WKFCRPPLDQCITEGGIAVGGLEYLLSLHNNCVMSSQDKQKSNQNLFDSASFKPVYIDSF 770
Query: 719 PKLRALYCQYKSCVASALSGLSTGNSIHQTATLILSMIYQK 759
PKLRALYCQYKSCVAS LSG+STGNSIHQTA++ILSMIYQK
Sbjct: 771 PKLRALYCQYKSCVASTLSGISTGNSIHQTASVILSMIYQK 811
>Medtr7g074290.2 | mediator of RNA polymerase II transcription
subunit 33A | HC | chr7:27762202-27771866 | 20130731
Length = 992
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/486 (80%), Positives = 425/486 (87%), Gaps = 3/486 (0%)
Query: 274 MENAMDSRQIPIKSSIDVLTEQIKTLQIINQASWQETFLALWLSALRLVQRERDPPEGPI 333
MENAMDSRQIPIKS+I+VLTE IKTLQI NQASW ETFLALWLSALRLVQRERDPPEGPI
Sbjct: 1 MENAMDSRQIPIKSAIEVLTEGIKTLQIFNQASWHETFLALWLSALRLVQRERDPPEGPI 60
Query: 334 PHLEARLCVLLSIVPLAIVNVLKEDSKHNPSSVQMSMESGYSHEMKNDGSGKLGLISSVE 393
PHLEARLC+LLSIVPL IVNVL++D++HN S+ +S+ S Y HEMK+D S KLGLISSV+
Sbjct: 61 PHLEARLCMLLSIVPLVIVNVLRDDTEHNLSTAPVSVGSEYKHEMKSDLSMKLGLISSVQ 120
Query: 394 VLGHFSSLLCPPALVVDPANQAARKAARFIYNSTNKNGEPVTGIHANSNTKAGGNLRHLI 453
VLGHFS LLCPPALVVD ANQAARKA+ FIYNS + GEP T I+AN+N+ AGGNLRHLI
Sbjct: 121 VLGHFSGLLCPPALVVDAANQAARKASSFIYNSMKEKGEPFTSINANANSNAGGNLRHLI 180
Query: 454 VEACIARNLMDTSVYFWPGYVXXXXXXXXXXXXXXXXPWLTFMEGTPLNNSLINSLTVTP 513
VEACIARNLMDTSVYFWPGYV PWLTFMEGTPLNNSLIN+L TP
Sbjct: 181 VEACIARNLMDTSVYFWPGYVSTSVMSLSDSTPLGKSPWLTFMEGTPLNNSLINALAATP 240
Query: 514 ASSLAEIEKLYFIALNGTEVERPAAAKILCSASLSRGWYIQEHVVHYVVKLLASPVPLGH 573
ASS+AEIEKLY+IAL+G+EVERP AAKILC ASLSRGWYIQEHVVHYVVKLLA PVP +
Sbjct: 241 ASSIAEIEKLYYIALSGSEVERPTAAKILCGASLSRGWYIQEHVVHYVVKLLACPVPHSN 300
Query: 574 SGSWSLLVDNMSMLSAVLRGASSVDTVHILSLHGVVPTVAASLLPLCEAFGSITPNSINT 633
SG+ L VDNMSM+SAVLRGASSVDT+HILSLHGVVPTVAASLLPLCEAFGSI+P I+T
Sbjct: 301 SGTRGLFVDNMSMISAVLRGASSVDTLHILSLHGVVPTVAASLLPLCEAFGSISPTPIST 360
Query: 634 GDEPSTSTYMAYMAFSLAFLFLIRLWKFCRPPLDQGITEEGIAVGGLEYLLSLHNNRVMS 693
GDE STS YMAFSLAFLFLIRLWKFCRPPLDQ ITE GIAVGGLEYLLSLHNN VMS
Sbjct: 361 GDESSTSV---YMAFSLAFLFLIRLWKFCRPPLDQCITEGGIAVGGLEYLLSLHNNCVMS 417
Query: 694 SQDKLESNQSLFESASVKPVCIDSFPKLRALYCQYKSCVASALSGLSTGNSIHQTATLIL 753
SQDK +SNQ+LF+SAS KPV IDSFPKLRALYCQYKSCVAS LSG+STGNSIHQTA++IL
Sbjct: 418 SQDKQKSNQNLFDSASFKPVYIDSFPKLRALYCQYKSCVASTLSGISTGNSIHQTASVIL 477
Query: 754 SMIYQK 759
SMIYQK
Sbjct: 478 SMIYQK 483
>Medtr2g021400.1 | mediator of RNA polymerase II transcription
subunit 33A | HC | chr2:7282174-7290385 | 20130731
Length = 1319
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 285/779 (36%), Positives = 442/779 (56%), Gaps = 36/779 (4%)
Query: 1 MCFEKDHPSMWKFMSHALSSRLVFPLQILSLLSSKVIPRRRSHPHAYALFLPLLDQHVFS 60
+C++ + P +WKF+ AL +V P+ +L+LLS +VIP R + P AY L+L L+ +H F
Sbjct: 54 ICWDNNVPIIWKFLEKALILNIVPPMLLLALLSVRVIPCRHAQPAAYRLYLELVKKHTFE 113
Query: 61 FQPTGSVSCNLRIISSVDSSLQLSETYKIHDLELGHVFVLFFFNIIIALIDSTLDDWGLQ 120
+ S + + S+D+ L LS+ + + E G V V F F+I+ L+D++LDD GL
Sbjct: 114 LKSQISRPDYQKDMKSIDAVLHLSKIFGMSQSEPGIVVVEFIFSIVWQLLDASLDDEGLL 173
Query: 121 VTFDERSCLVPTGDQYMEIDHNVTHNFKKSEYHEQIRKRNSFTALEVLERLTASRKATIL 180
E+ Q ME+D +N+ +E E +R N+ A+E++ + + ++ +
Sbjct: 174 EFTQEKKSRWAMLYQEMELDGR--NNY--TEQIENLRSINTLIAVEMIGKFLQDKVSSRI 229
Query: 181 LQSVLLNMPEKFNCLRQRLQFXXXXXXXXXXXXXVNP-VLTKMSANIRGVSNFDYCLNKH 239
L N+P + QRLQ ++P L ++++ V + + +
Sbjct: 230 LCLARRNLPAHWLSFVQRLQLLSTNSLALRKSKTLSPEALLHLTSDACMVLSKECKTHSQ 289
Query: 240 QLVGKLVDVGPCKTLLRYSYRSFQSPCWVPLDIYMENAMDSRQIPIKSSIDVLTEQIKTL 299
Q K++ + + + S W+PLD+ +E+ MD Q+ S+++ ++ IKTL
Sbjct: 290 QKFRKVMAFEYLSSSASLCHGASHSALWIPLDLVLEDTMDGYQVSATSAVEEISGLIKTL 349
Query: 300 QIINQASWQETFLALWLSALRLVQRERDPPEGPIPHLEARLCVLLSIVPLAIVNVLKE-- 357
+ IN SW +TFL LW ++LRLVQRERDP EGP+PHLE RLC+LL I+PL + N ++E
Sbjct: 350 RAINGTSWYDTFLGLWFASLRLVQRERDPIEGPMPHLETRLCMLLCIIPLVVANFIEEDE 409
Query: 358 -------DSKHNPSSVQMSMESGYSHEMKNDGSGKLGLISSVEVLGHFSSLLCPPALVVD 410
D K + Q E + + +ND L+SS++VLG + SLL PP V+
Sbjct: 410 EEEQTTIDEKDGDPTDQWK-EKRFPGKCRND------LVSSLQVLGDYQSLLTPPQSVIA 462
Query: 411 PANQAARKAARFIYNSTNKNGEPVTGIHANSNTKAGGNLRHLIVEACIARNLMDTSVYFW 470
ANQAA KA FI + A GN+RHLIVEACI+RNL+DTS Y W
Sbjct: 463 AANQAAAKAMLFISGIAIGSAYYDCLTMAEMPVDCSGNMRHLIVEACISRNLLDTSAYLW 522
Query: 471 PGYVXXXXXXXXXXXXXXXXPWLTFMEGTPLNNSLINSLTVTPASSLAEIEKLYFIALNG 530
PGY W +F++G L + ++N+L +PA+SLAE+EK++ IA+ G
Sbjct: 523 PGYANGHINQIPQCMPAQVPGWSSFLKGAALTSGMVNALVSSPATSLAELEKIFEIAIAG 582
Query: 531 TEVERPAAAKILCSASLSRGWYIQEHVVHYVVKLLASPVPLGHSGSWSLLVDNMSMLSAV 590
+E E+ +AA ILC ASL RGW IQEH VH++++LL+ PVP+ + + L++ +L+ +
Sbjct: 583 SEDEKISAATILCGASLIRGWNIQEHTVHFILRLLSPPVPIENMEGNNYLINYAPILNVL 642
Query: 591 LRGASSVDTVHILSLHGVVPTVAASLLPLCEAFGSITPN---SINTGDEPSTSTYMAYMA 647
G SS+D + + SLHG+VP +A SL+P+CE FGS PN + +G+E S A+
Sbjct: 643 FVGISSIDCIQVFSLHGLVPQLACSLMPICEVFGSCMPNISWKLTSGEEIS-----AHAV 697
Query: 648 FSLAFLFLIRLWKFCRPPLDQGITEEGIAVGGL--EYLLSLHNNRVMSSQD--KLESNQS 703
FS F+ L++LWKF PPL+ GI + L EYLL + N+++MS+ + K + +
Sbjct: 698 FSNVFILLLKLWKFNCPPLEHGIGDTPSVGSQLTPEYLLLVRNSQLMSAGNIRKDRNRRR 757
Query: 704 LFESASV---KPVCIDSFPKLRALYCQYKSCVASALSGLSTGNSIHQTATLILSMIYQK 759
L E AS+ V +DSFPKL+ Y Q+++C+AS LSGL G HQ +L+M+++K
Sbjct: 758 LSEIASLSSPNSVFVDSFPKLKVWYRQHQACIASTLSGLVHGTPFHQIVEGLLNMMFRK 816
>Medtr2g105810.1 | mediator of RNA polymerase II transcription
subunit 33A | HC | chr2:45673309-45664907 | 20130731
Length = 1316
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 278/796 (34%), Positives = 425/796 (53%), Gaps = 73/796 (9%)
Query: 1 MCFEKDHPSMWKFMSHALSSRLVFPLQILSLLSSKVIPRRRS--HPHAYALFLPLLDQHV 58
+C++ + WK++ A+ SR+V P +L+LLS+KV+P R HP AY+L+L LL+ H
Sbjct: 51 ICWDNNVAVTWKYLEKAMESRMVPPFLVLALLSTKVVPNRHPLLHPPAYSLYLHLLNTHA 110
Query: 59 FSFQPTGSVSCNLRIISSVDSSLQLSETYKIHD----------LELGHVFVLFFFNIIIA 108
FS + +++S+ L+LS+ Y HD G V V F F ++
Sbjct: 111 FSLSSLINSPNYPSLMNSIHQLLRLSQLY--HDSSSYPPPPPPPHPGVVLVQFLFTLVWQ 168
Query: 109 LIDSTLDDWGLQVTFDERSCLVPTGDQYMEIDHNVTHNFKKSEYHEQIRKRNSFTALEVL 168
L+ ++L D L + + D ME+D++ +H + +N+ TA++ +
Sbjct: 169 LLQASLQDEAL-LQHKNSLLFLDHPDLTMELDNH---------HHHPLHAKNTATAIQFI 218
Query: 169 ERLTASRKATILLQSVLLNMPEKFNCLRQRL-QFXXXXXXXXXXXXXVNPVL-----TKM 222
++ + +L V NM + L Q V+P L K+
Sbjct: 219 AHFLHNKLTSRILSLVQRNMSTHWGAFVDDLEQLAANSLILRSLKHDVSPELFYPLNLKL 278
Query: 223 SANIRGVSNFDYCLNKHQLVGKLVDVGPCKTLLRYSYRSFQSPCWVPLDIYMENAMDSRQ 282
+ + SN K +L L G ++ S W+P+D+ +E+AMD
Sbjct: 279 NWPLSCESN-----KKMKLSSVLCASGSGSADQSHN----DSSLWLPIDLILEDAMDGHH 329
Query: 283 -IPIKSSIDVLTEQIKTLQIINQASWQETFLALWLSALRLVQRERDPPEGPIPHLEARLC 341
+ S++++LT+ +K LQ +N +W FL LW +ALRLVQRERDP EGP+P L+ LC
Sbjct: 330 HVMAASAVELLTDLVKALQAVNATAWHNAFLGLWFAALRLVQRERDPSEGPVPRLDTCLC 389
Query: 342 VLLSIVPLAIVNVLKEDSKHNPSSVQMSMESGYSHEMKNDGSGKLGLISSVEVLGHFSSL 401
+LL I L + N+++E+ + S + ++ G + L++S+++LG + L
Sbjct: 390 MLLCITTLVVANLIEEEEGELIEEAERSPRNQRKDKLAM-GKRRGELVASLQLLGDYEDL 448
Query: 402 LCPPALVVDPANQAARKAARFIYNST------NKNGEPVTGIHANSNTKAGGNLRHLIVE 455
L PP V ANQAA KA F+ + N N P T GNLRHLIVE
Sbjct: 449 LNPPQPVTWVANQAAAKATMFVSGHSGYLEYMNVNDLP---------TNCSGNLRHLIVE 499
Query: 456 ACIARNLMDTSVYFWPGYVXXXXXXXXXXXXXXXXPWLTFMEGTPLNNSLINSLTVTPAS 515
ACIAR+L+DTS YFWPGYV W + M+G+ LN +N L TPAS
Sbjct: 500 ACIARHLIDTSAYFWPGYVSAPSNQLPRGIPNHLPSWSSLMKGSLLNPPWVNVLVATPAS 559
Query: 516 SLAEIEKLYFIALNGTEVERPAAAKILCSASLSRGWYIQEHVVHYVVKLLASPVPLGHSG 575
SLAEIEK++ A+NG++ E+ +AA ILC ASL RGW +QEHVV +++KLL+ VP ++G
Sbjct: 560 SLAEIEKIFEFAINGSDEEKISAATILCGASLVRGWNVQEHVVFFIIKLLSPAVPPKYAG 619
Query: 576 SWSLLVDNMSMLSAVLRGASSVDTVHILSLHGVVPTVAASLLPLCEAFGSITPN---SIN 632
+ + L+ L+ +L G SSVD+V I SLHG VP +AA+L+P+CEAFGS P+ +
Sbjct: 620 TENHLISYAPFLNVLLIGISSVDSVQIFSLHGAVPLLAAALMPICEAFGSCVPSVSWTAA 679
Query: 633 TGDEPSTSTYMAYMAFSLAFLFLIRLWKFCRPPLDQGITEEGI-AVG---GLEYLLSLHN 688
TG++ S ++ FS AF+ L+RLW+F PP++ + A+G G EYLL + N
Sbjct: 680 TGEKLS-----CHVVFSNAFVLLLRLWQFNHPPVEHVMGGAATPALGSQLGPEYLLLVRN 734
Query: 689 NRVM----SSQDKLESNQ-SLFESASVKPVCIDSFPKLRALYCQYKSCVASALSGLSTGN 743
+ + S +D+++S + S S S +PV +DSFPKL Y Q++ C+AS L G
Sbjct: 735 STLASFGKSPRDRIKSRRFSKMISFSTEPVFMDSFPKLNTWYQQHQECLASTRCALVPGG 794
Query: 744 SIHQTATLILSMIYQK 759
I + +LSM+ +K
Sbjct: 795 PILRIVDALLSMMCRK 810
>Medtr7g094550.1 | mediator of RNA polymerase II transcription
subunit 33A | HC | chr7:37640277-37651980 | 20130731
Length = 1338
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 273/778 (35%), Positives = 417/778 (53%), Gaps = 45/778 (5%)
Query: 8 PSMWKFMSHALSSRLVFPLQILSLLSSKVIPRRRSHPHAYALFLPLLDQHVFSFQPTGSV 67
P WK + A S L+ PL +++LLS++++P R+ +P AY L+L L+ Q+V Q +
Sbjct: 73 PIAWKLLDIAASLNLLPPLLLVALLSTRIVPMRKVYPQAYRLYLELVKQYVLMLQFRNNS 132
Query: 68 SCNLRIISSVDSSLQLSETYKIHDLELGHVFVLFFFNIIIALIDSTLDDWGLQVTFDERS 127
I+ S+D+ LQLS+ Y E G V F F+I+ L+++ LDD GL E
Sbjct: 133 PNYEMIMESIDNVLQLSQVYSHKVCEPGVALVEFVFSILWQLLEAILDDEGLLDHVPENK 192
Query: 128 CLVPTGDQYMEIDHNVTHNFKKSEYHEQIRKRNSFTALEVLERLTASRKATILLQSVLLN 187
+ M+I + N K+E E ++++N+ A+E++ +L ++ + LL V N
Sbjct: 193 PRWLSRSHDMDIAEHDCINEMKTEQKEGMQRKNTMIAIEIIVQLLQNKMTSRLLCLVHRN 252
Query: 188 MPEKFNCLRQRLQFXXXXXXXXXXXXXVNP-VLTKMSANIRGVSNFDYCLNKHQLVGKLV 246
MP + ++Q + L + NI GV + C K +L +V
Sbjct: 253 MPSYWGSFNHQMQLIASKSSILKNLKHITADTLLSLMENIHGVVS---CNTKSKLESNVV 309
Query: 247 DVGPCKTLLRYSYR---SFQSPCWVPLDIYMENAMDSRQIPIKSSIDVLTEQIKTLQIIN 303
P + + + + S S W+P+D+ +E+A+D + S+I+++T+ +K+L +N
Sbjct: 310 I--PAGSQIAFGGQCEGSSWSSIWLPIDLILEDALDGGHVAALSAIEIITDLVKSLHAVN 367
Query: 304 QASWQETFLALWLSALRLVQRERDPPEGPIPHLEARLCVLLSIVPLAIVNVLKEDSKHNP 363
W TFL LW++ALRLVQRER+ EGP+P L+ +C+LLSI NV+ +
Sbjct: 368 GTMWHNTFLGLWIAALRLVQRERNLSEGPVPRLDTCMCILLSIT----TNVVANIIEEEE 423
Query: 364 SSVQMSMESGYSHEMKND---GSGKLGLISSVEVLGHFSSLLCPPALVVDPANQAARKAA 420
+ E G +++ KN G + LI+ ++ LG F LL PP V+ ANQAA KA
Sbjct: 424 GELIEEAECGPTNQGKNQQVLGKRRGELITCLQSLGDFQCLLTPPQAVLREANQAAAKAM 483
Query: 421 RFIYNSTNKNGEPVTGIHANSNT------KAGGNLRHLIVEACIARNLMDTSVYFWPGYV 474
+ S G PV H+ S++ GNLRHLIVEACIARN++DTS YFWPGYV
Sbjct: 484 PIMLVS----GNPVGSGHSKSSSMDDLPMNCFGNLRHLIVEACIARNILDTSAYFWPGYV 539
Query: 475 XXXXXXXXXXXXXXXXPWLTFMEGTPLNNSLINSLTVTPASSLAEIEKLYFIALNGTEVE 534
W + M+G+ L L++ L TPASSLAEIEK+Y I ++G++ E
Sbjct: 540 NACSNQIPSSISNQVDGWSSLMKGSKLTPGLVDVLAATPASSLAEIEKVYEITIDGSDEE 599
Query: 535 RPAAAKILCSASLSRGWYIQEHVVHYVVKLLASPVPL-GHSGSWSLLVDNMSMLSAVLRG 593
+ +AA ILC ASL+ GW IQEH + ++ KLL SP+ L H+G+ + L+ L+ +L G
Sbjct: 600 KISAATILCGASLASGWNIQEHTIIFITKLL-SPICLPNHTGTENHLISQARFLNVLLVG 658
Query: 594 ASSVDTVHILSLHGVVPTVAASLLPLCEAFGSITPN---SINTGDEPSTSTYMAYMAFSL 650
SS D VHI SLHG+VP +AA L+ +CE FGS + ++ TG + S FS
Sbjct: 659 ISSADCVHIFSLHGLVPLLAAGLMQICEVFGSCVYDVSWTVATGGKLSPQE-----VFSN 713
Query: 651 AFLFLIRLWKFCRPPLDQGITEEGI-AVGGL---EYLLSLHNNRVM----SSQDKLESNQ 702
AF L+R W+F ++Q +G L E LL + N+RV S++D L+ +
Sbjct: 714 AFTLLLRFWRFDHLSIEQVRGNAATPPLGNLFSPENLLLVRNSRVASFGRSTKDSLKLKR 773
Query: 703 -SLFESASVKPVCIDSFPKLRALYCQYKSCVASALSGLSTGNSIHQTATLILSMIYQK 759
S + + IDSFPKL + Q++ +AS SGL G + Q +L M+++K
Sbjct: 774 LSKIVRFPKESIYIDSFPKLNFWHRQHQERIASTHSGLMPGGPVQQIVDALLRMMFRK 831
>Medtr7g056330.1 | mediator of RNA polymerase II transcription
subunit 33A | HC | chr7:19823945-19827848 | 20130731
Length = 372
Score = 123 bits (308), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 73/108 (67%)
Query: 447 GNLRHLIVEACIARNLMDTSVYFWPGYVXXXXXXXXXXXXXXXXPWLTFMEGTPLNNSLI 506
GNLRHLIVEACIARNL+DTS Y+WPGYV W + M+G+ L +L
Sbjct: 263 GNLRHLIVEACIARNLLDTSAYYWPGYVNACSNQIPASISNQVDGWSSLMKGSKLTPTLA 322
Query: 507 NSLTVTPASSLAEIEKLYFIALNGTEVERPAAAKILCSASLSRGWYIQ 554
+ L TPASSLAEIEK+Y IA+ G++ E+ +AA I+C ASL+RGW Q
Sbjct: 323 DFLAATPASSLAEIEKIYEIAIYGSDEEKISAATIMCGASLARGWNAQ 370
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 82 QLSETYKIHDLELGHVFVLFFFNIIIALIDSTLDDWGLQVTFDERSCLVPTGDQYMEIDH 141
QLS+ Y + E G V F F+I+ L+++TLDD GL D + + M+ID
Sbjct: 71 QLSQEYSHNVCEPGVALVEFVFSILRQLLEATLDDEGL---LDHLARWLSISHD-MDIDE 126
Query: 142 NVTHNFKKSEYHEQIRKRNSFTALEVLERLTASRKATILLQSVLLNMPEKFNCLRQRLQF 201
+V N +E E +R++N+ A+E++ ++ + LL V NMP + + ++Q
Sbjct: 127 HVRINEMTTEQKEVMRRKNTTLAIEIIVNFLQNKMTSRLLSLVHRNMPSYWRSFKHQMQL 186
Query: 202 XXXXXXXXXXXXXVNP-VLTKMSANIRGVSNFDYCLNKHQLVGKLVDVGPCKTLLRYSYR 260
+N L NI GV + C K V P + + +
Sbjct: 187 IASKSSILKNLTHINADTLLSAMENIHGVVS---CNAK--------SVIPAGSQVAFDGA 235
Query: 261 SFQSPCWVPLDIYMENAMDSRQIPIKSSIDVLT 293
+P+D+ +E+A+D + S+I+++T
Sbjct: 236 -------LPIDLILEDALDGGHVATFSAIEMIT 261