Miyakogusa Predicted Gene

Lj1g3v2482420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2482420.1 Non Characterized Hit- tr|C5YZS8|C5YZS8_SORBI
Putative uncharacterized protein Sb09g023470
OS=Sorghu,31.14,2e-17,seg,NULL,CUFF.29058.1
         (380 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g073280.1 | transmembrane protein, putative | HC | chr7:27...   303   2e-82

>Medtr7g073280.1 | transmembrane protein, putative | HC |
           chr7:27366686-27373900 | 20130731
          Length = 364

 Score =  303 bits (777), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 191/366 (52%), Positives = 222/366 (60%), Gaps = 27/366 (7%)

Query: 21  SDASFVKDIRKLVSLDPKDQENPTTKGSPPPASSERKSDPKGGDETKVKKDIPPSTSNND 80
           S ASF+KD+RKL+          +TK S  P   E+K DP      + K D+       +
Sbjct: 20  SHASFLKDLRKLID---------STKDSLIP--EEKKLDPNKTAGEEKKNDV-------N 61

Query: 81  TTPVPQPQPSHKVESENGTKKETTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 140
             PVP PQP  KVE+ NG  ++ T+                                   
Sbjct: 62  IPPVPTPQPLPKVENNNGENQKETNNKITNTPPPVPATAPPPPVLVTAPPPPVPATAPPP 121

Query: 141 XXKKTDDGGKVQEKEKGKSGGIGLSQSSTNDTCEGLNFCTDEGDMTACISITDPKYLVVL 200
             KK  D GK Q +EKGK+ GI L+ S+TNDTCEGL+ C D+GDM ACIS  D K  VVL
Sbjct: 122 LPKK--DEGKGQVEEKGKNEGIKLAHSTTNDTCEGLHTCRDDGDMVACISKMDSKNFVVL 179

Query: 201 LQNRGDGTIKVQLRSDFESNLGGVEVDKHKTEKVNITRXXXXXXXXXXNAGKGDCVLH-- 258
           LQNRG GTIKV+LRSD ESNLG + VDK+KTEKV I +          +AGKGDCVLH  
Sbjct: 180 LQNRGGGTIKVKLRSDLESNLGDIVVDKNKTEKVTIKQIKSESTELTLDAGKGDCVLHVT 239

Query: 259 MATHVPEGSFVLRLPSYDKILTPVNGAYFLIFTVLVFGGIWACCMFRKKRP-DEIPYQEL 317
           + T VPE SF LRLPS+DKILTPVNGAYFLIFTV+VF   WACC   KK+P DEIPYQEL
Sbjct: 240 VVTPVPEASFFLRLPSFDKILTPVNGAYFLIFTVIVFAVTWACCCIFKKKPRDEIPYQEL 299

Query: 318 EMALPVSASATNVESAEXXXXXXXXXXXXNVAVKSPGAVR---GISANGLTSRSANKDGW 374
           EMALP SASAT VESAE            NVAVKSP  VR    ISANGLTSRS+NKDGW
Sbjct: 300 EMALPESASATVVESAEGWDQGWDDDWDDNVAVKSP-VVRHAGSISANGLTSRSSNKDGW 358

Query: 375 DNNWDE 380
           ++NWD+
Sbjct: 359 EDNWDD 364