Miyakogusa Predicted Gene

Lj1g3v2471300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2471300.1 tr|F4XYZ9|F4XYZ9_9CYAN PRC-barrel domain protein
OS=Moorea producens 3L GN=LYNGBM3L_53180 PE=4 SV=1,35.03,2e-18,no
description,NULL; seg,NULL; PRC-barrel
domain,PRC-barrel-like,CUFF.29044.1
         (382 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g073510.1 | hypothetical protein | HC | chr7:27482647-2747...   431   e-121

>Medtr7g073510.1 | hypothetical protein | HC |
           chr7:27482647-27475953 | 20130731
          Length = 392

 Score =  431 bits (1108), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/397 (64%), Positives = 278/397 (70%), Gaps = 20/397 (5%)

Query: 1   MTELLATNPLAISAADSSRFPFLNSCPTPS-TRTQLNPNYHTLFSPKLSKITAGSKXXXX 59
           MT+ LA NPL+ISA +S  FPFLNS PT S TRTQ +    + FSPKLSK +  +     
Sbjct: 1   MTDFLAINPLSISATESPLFPFLNSHPTSSSTRTQFSSISFSPFSPKLSKTSGNNSVSSA 60

Query: 60  XXXXXXXXXX--XXXXXFYDEIEFEDSKVKNFGLERKPFDEGSPHET-GSIPF-----GD 111
                            FYDE++FEDSK  NFGLE     EG  +ET GSIPF      D
Sbjct: 61  LSSRSNGKQGPPSRGHSFYDELQFEDSKENNFGLEL----EGLSNETDGSIPFFEIDEND 116

Query: 112 GKGNGKRETHLGEDDDLVKVQGDED---GGVDLREDDQVXX--XXXXXXXXXQMIRRSNL 166
            KG+G   T LGED+ L++VQGD D    GVDLR +D+V             Q+IRRSNL
Sbjct: 117 DKGSGNSGTELGEDE-LIRVQGDGDEDRDGVDLRINDKVEKFGGNLRLRRGKQVIRRSNL 175

Query: 167 LAKQVISVRSALSLGFVSQLWVDTTSWMVLFVEVRPNLLSGDSEIFLLEDISQVGDVILV 226
           LAKQVIS++SALSLGFVSQLWVDTTSWMVLFVEVR NLLSGDSE F LEDISQVGDV+LV
Sbjct: 176 LAKQVISIQSALSLGFVSQLWVDTTSWMVLFVEVRSNLLSGDSEKFFLEDISQVGDVVLV 235

Query: 227 QDESVIDTEYKMIRLETLVGYKVVTSSQRNIGKVRGYNFSINSGAVEELEIDSFGLSIIP 286
            DESVID EY MI LETLVGY+VVT S RNIGKVRGYNFSINSGAVEELEIDSFGLSIIP
Sbjct: 236 PDESVIDNEYNMIGLETLVGYRVVTPSLRNIGKVRGYNFSINSGAVEELEIDSFGLSIIP 295

Query: 287 SSLVSTYXXXXXXXXXXXXXXXXXXXXXXLRIQRLSKGFLGNQNVGISVGDVEDYDYEQS 346
           SSLVSTY                      LRIQRLSKGFLGNQNVGIS  DVEDY+YEQS
Sbjct: 296 SSLVSTYSLMVEDVLEVVSDAVVVHEAAALRIQRLSKGFLGNQNVGISADDVEDYEYEQS 355

Query: 347 EAYDRVSRRRKSFGRKKPNQRDWD-NEDNWELPMDYL 382
             Y RVSRRRK FGRKKPN R+WD NEDNWELPMDYL
Sbjct: 356 ATYGRVSRRRKGFGRKKPNPREWDNNEDNWELPMDYL 392