Miyakogusa Predicted Gene

Lj1g3v2432910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2432910.1 tr|B9IGN9|B9IGN9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_778006 PE=4
SV=1,45.99,1e-17,seg,NULL,CUFF.29032.1
         (365 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g072310.1 | ENTH/VHS/GAT family protein | HC | chr7:268464...    63   4e-10
Medtr7g072310.3 | ENTH/VHS/GAT family protein | HC | chr7:268464...    63   5e-10
Medtr7g072310.2 | ENTH/VHS/GAT family protein | HC | chr7:268464...    63   5e-10

>Medtr7g072310.1 | ENTH/VHS/GAT family protein | HC |
           chr7:26846469-26852490 | 20130731
          Length = 731

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 45/76 (59%), Gaps = 11/76 (14%)

Query: 274 NYQNHLSSTNALSTPQANTPYTS-----AVR----GDPVASSGQSNPPNATGQRPFVPSY 324
           NYQ+H  S NA+ST Q NT   S      VR        +S G       +GQRPFVPSY
Sbjct: 637 NYQSH--SQNAISTSQGNTATASYPPALGVRPSQHNQSFSSPGVDPRGGNSGQRPFVPSY 694

Query: 325 RLFEDLNVFGNTDGRA 340
           +LFEDLNVFGNTDGR 
Sbjct: 695 KLFEDLNVFGNTDGRV 710



 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 43/71 (60%), Gaps = 5/71 (7%)

Query: 22  TSKDQDIIDXXXXXXXXXXXXXQQTTYTPS-ASSQG--MHQIPAPSGTGTEGYSYAPQTY 78
           TSKDQDIID               TTY PS ASSQG   HQIP PS T  E YSYAPQ Y
Sbjct: 402 TSKDQDIIDLLSITLSLTPSSPPTTTYAPSSASSQGGMHHQIPTPSST--ESYSYAPQAY 459

Query: 79  PGSLPFDSYVV 89
           PG+ P++SYV 
Sbjct: 460 PGNSPYNSYVA 470


>Medtr7g072310.3 | ENTH/VHS/GAT family protein | HC |
           chr7:26846469-26852474 | 20130731
          Length = 659

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 45/76 (59%), Gaps = 11/76 (14%)

Query: 274 NYQNHLSSTNALSTPQANT-----PYTSAVR----GDPVASSGQSNPPNATGQRPFVPSY 324
           NYQ+H  S NA+ST Q NT     P    VR        +S G       +GQRPFVPSY
Sbjct: 565 NYQSH--SQNAISTSQGNTATASYPPALGVRPSQHNQSFSSPGVDPRGGNSGQRPFVPSY 622

Query: 325 RLFEDLNVFGNTDGRA 340
           +LFEDLNVFGNTDGR 
Sbjct: 623 KLFEDLNVFGNTDGRV 638



 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 43/71 (60%), Gaps = 5/71 (7%)

Query: 22  TSKDQDIIDXXXXXXXXXXXXXQQTTYTPS-ASSQG--MHQIPAPSGTGTEGYSYAPQTY 78
           TSKDQDIID               TTY PS ASSQG   HQIP PS T  E YSYAPQ Y
Sbjct: 330 TSKDQDIIDLLSITLSLTPSSPPTTTYAPSSASSQGGMHHQIPTPSST--ESYSYAPQAY 387

Query: 79  PGSLPFDSYVV 89
           PG+ P++SYV 
Sbjct: 388 PGNSPYNSYVA 398


>Medtr7g072310.2 | ENTH/VHS/GAT family protein | HC |
           chr7:26846469-26852527 | 20130731
          Length = 659

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 45/76 (59%), Gaps = 11/76 (14%)

Query: 274 NYQNHLSSTNALSTPQANT-----PYTSAVR----GDPVASSGQSNPPNATGQRPFVPSY 324
           NYQ+H  S NA+ST Q NT     P    VR        +S G       +GQRPFVPSY
Sbjct: 565 NYQSH--SQNAISTSQGNTATASYPPALGVRPSQHNQSFSSPGVDPRGGNSGQRPFVPSY 622

Query: 325 RLFEDLNVFGNTDGRA 340
           +LFEDLNVFGNTDGR 
Sbjct: 623 KLFEDLNVFGNTDGRV 638



 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 43/71 (60%), Gaps = 5/71 (7%)

Query: 22  TSKDQDIIDXXXXXXXXXXXXXQQTTYTPS-ASSQG--MHQIPAPSGTGTEGYSYAPQTY 78
           TSKDQDIID               TTY PS ASSQG   HQIP PS T  E YSYAPQ Y
Sbjct: 330 TSKDQDIIDLLSITLSLTPSSPPTTTYAPSSASSQGGMHHQIPTPSST--ESYSYAPQAY 387

Query: 79  PGSLPFDSYVV 89
           PG+ P++SYV 
Sbjct: 388 PGNSPYNSYVA 398