Miyakogusa Predicted Gene

Lj1g3v2418700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2418700.1 tr|G7KW01|G7KW01_MEDTR D-alanine--D-alanine
ligase OS=Medicago truncatula GN=MTR_7g071990 PE=4
SV=1,82.79,0,SUBFAMILY NOT NAMED,NULL; D-ALANINE--D-ALANINE
LIGASE,D-alanine--D-alanine ligase; PreATP-grasp doma,CUFF.29126.1
         (942 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g071990.1 | D-alanine-D-alanine ligase | HC | chr7:2673551...  1567   0.0  
Medtr7g071990.2 | D-alanine-D-alanine ligase | HC | chr7:2673551...  1405   0.0  

>Medtr7g071990.1 | D-alanine-D-alanine ligase | HC |
           chr7:26735511-26724110 | 20130731
          Length = 955

 Score = 1567 bits (4057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 772/924 (83%), Positives = 837/924 (90%), Gaps = 19/924 (2%)

Query: 38  IFLRRFGLKHELRTCRATPS--IARAS-AREVVVVDGGVEKTKEEGRVLKVG-------- 86
           IF +   L H+L TCRAT S  +ARA+ +  VVV  G  EK KEEGR L+VG        
Sbjct: 32  IFPKHLELNHKLITCRATRSSAVARATISEVVVVSSGVAEKGKEEGRALRVGLICGGPSA 91

Query: 87  -------SARSVLDHLQGDDIHVSCYYIDINLNAFAISSAQVYSNTPADFDFKLESLAQS 139
                  SARSVLDHLQGDD+HVSCYYID NLNA AISSAQVYSNTPADFDFKLESLAQS
Sbjct: 92  ERGISLNSARSVLDHLQGDDLHVSCYYIDCNLNAHAISSAQVYSNTPADFDFKLESLAQS 151

Query: 140 FSTLDDMAEHLATSVDIVFPVIHGQFGEDGRIQELLEKYNVPYVGTGSKECCQAFDKYKA 199
           FSTL D+AEHL+ +VDIVFPVIHG+FGEDG IQELLEKYNVP+VGTGS ECCQAFDKYKA
Sbjct: 152 FSTLADLAEHLSAAVDIVFPVIHGRFGEDGGIQELLEKYNVPFVGTGSSECCQAFDKYKA 211

Query: 200 SLELRQHGFVTVPSFLVQGHKTDKSELSEWFRKHQLDPDLGKVVVKPTRGGSSIGVGVAY 259
           S ELR+HGFVTVPSFLVQG++T+KSELSEWFRKHQLDPD GKVVVKPTRGGSSIGV VAY
Sbjct: 212 SSELRKHGFVTVPSFLVQGYETNKSELSEWFRKHQLDPDTGKVVVKPTRGGSSIGVTVAY 271

Query: 260 GVNDSLVKANEIMTEGIDNKVLIEIFLEGGSEFTAIVLDVGSGSDCCPVVLLPTEVELQF 319
           GVNDSLVKA+EIM+EGID+KVLIE+FLEGGSEFTAIVLDVGS SD  PV LLPTEVELQF
Sbjct: 272 GVNDSLVKASEIMSEGIDDKVLIELFLEGGSEFTAIVLDVGSSSDSFPVALLPTEVELQF 331

Query: 320 LGANDVKENDAIFNYRRKYLPTQQVAYHTPPRFPLDVIDNIRKGASLIFQRLCLQDFARI 379
           LG ND+KENDAIFNYRRKYLPTQQVAYHTPPRFPLDVI+NIRKGAS++FQ+L LQDFARI
Sbjct: 332 LGENDLKENDAIFNYRRKYLPTQQVAYHTPPRFPLDVIENIRKGASILFQQLHLQDFARI 391

Query: 380 DGWFLPNSDSKLSCSENEFGRTEAGTILFTDINLISGMEQTSFLFQQASKVGFSHKNILR 439
           DGWFLP+S  KLS SE+EFGR+E+GTI+FTDIN+ISGMEQTSFLFQQASKVGFSH NILR
Sbjct: 392 DGWFLPDSGCKLSSSESEFGRSESGTIIFTDINMISGMEQTSFLFQQASKVGFSHTNILR 451

Query: 440 SVVRHACLRFPNLPSESGISAQVPTRSKSFELNKAFPFPEGARKVFVIFGGDTSERQVSL 499
           S+V HACLRFPNL S SGIS+Q+P+RSKS ELNK+FP  EGA+KVFVIFGGDTSERQVSL
Sbjct: 452 SIVHHACLRFPNLASVSGISSQIPSRSKSSELNKSFPRREGAQKVFVIFGGDTSERQVSL 511

Query: 500 MSGTNVWLNLLAFHDLEVTPFLLASTSECESNVDMVKKADDVRDRTIWSLPYSLVLRHTT 559
           MSGTNVWLNLL F+DLEVTP LL+STS+  S+VD+  KADDV +RT+WSLPYSLVLRHTT
Sbjct: 512 MSGTNVWLNLLGFNDLEVTPCLLSSTSDYASSVDIGIKADDVWNRTVWSLPYSLVLRHTT 571

Query: 560 EEVLAACKEAIEPDRAALTSNLRKKVVNELMEGLKDHNWFTGFDIADELPMKFSLRLWIK 619
           EEVL AC EAIEP+RAALTS+LRK+V+N+LMEGLKDHNWFTGFDIA+ELP KFSLR WIK
Sbjct: 572 EEVLDACVEAIEPNRAALTSDLRKQVMNDLMEGLKDHNWFTGFDIANELPKKFSLREWIK 631

Query: 620 SAKEVQATVFIAVHGGIGEDGTLQSLLDAEGVPYTGPGAMASKICMDKVATSVALKHLAN 679
            AKEV+ATVFIAVHGGIGEDG LQSLLDAEGVPYTGPGA+ASKICMDKVATSVA+ HLAN
Sbjct: 632 LAKEVKATVFIAVHGGIGEDGRLQSLLDAEGVPYTGPGALASKICMDKVATSVAVNHLAN 691

Query: 680 FGVLTINKDVRRKDDLFDKPITDIWHDLTQKLQCETLCVKPARDGCSTGVARLCCSDDLA 739
            G+LTINK+V RKDDL +KPI DIWHDLTQKLQCETLCVKPARDGCSTGVARL CS+DLA
Sbjct: 692 LGILTINKEVWRKDDLSNKPINDIWHDLTQKLQCETLCVKPARDGCSTGVARLRCSNDLA 751

Query: 740 IYVKALEDCLLRIPPNSFSKAHSIIEMPNPPPELLIFEPFIETDEIVVTSKFK-ETGHDL 798
           IY+KALED LLRIPPNS SKAH +IEMPNPPPELLIFEPFIETDEI+V+SK K ETGH  
Sbjct: 752 IYIKALEDSLLRIPPNSLSKAHGMIEMPNPPPELLIFEPFIETDEIIVSSKVKNETGHGF 811

Query: 799 MWKGHSRWVEITVGVIGKRGSMHSLSPSVTVKETGDILSLEEKFQGGTGINLTPPPLSIM 858
           MWKG+SRWVEITVGVIGKRGSMHSLSPSVTVKETGDILSLEEKFQGGTGINLTPPPLSIM
Sbjct: 812 MWKGNSRWVEITVGVIGKRGSMHSLSPSVTVKETGDILSLEEKFQGGTGINLTPPPLSIM 871

Query: 859 SEKALQRCKKHIEQIANTLQLEGFSRIDAFVNVDNGEVLIIEINTVPGMTPSTVLIHQAL 918
           SEKALQRCKKHIE IANTLQLEGFSRIDAFVNVD+GEVLIIE+NTVPGMTPSTVL+HQAL
Sbjct: 872 SEKALQRCKKHIELIANTLQLEGFSRIDAFVNVDSGEVLIIEVNTVPGMTPSTVLVHQAL 931

Query: 919 AEQPPLYPHQFFRTLLDLGSVRSM 942
           AEQPPLYPHQFFRTLLDL S RSM
Sbjct: 932 AEQPPLYPHQFFRTLLDLASERSM 955


>Medtr7g071990.2 | D-alanine-D-alanine ligase | HC |
           chr7:26735511-26724110 | 20130731
          Length = 889

 Score = 1405 bits (3637), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/840 (82%), Positives = 756/840 (90%), Gaps = 19/840 (2%)

Query: 38  IFLRRFGLKHELRTCRATPS--IARAS-AREVVVVDGGVEKTKEEGRVLKVG-------- 86
           IF +   L H+L TCRAT S  +ARA+ +  VVV  G  EK KEEGR L+VG        
Sbjct: 32  IFPKHLELNHKLITCRATRSSAVARATISEVVVVSSGVAEKGKEEGRALRVGLICGGPSA 91

Query: 87  -------SARSVLDHLQGDDIHVSCYYIDINLNAFAISSAQVYSNTPADFDFKLESLAQS 139
                  SARSVLDHLQGDD+HVSCYYID NLNA AISSAQVYSNTPADFDFKLESLAQS
Sbjct: 92  ERGISLNSARSVLDHLQGDDLHVSCYYIDCNLNAHAISSAQVYSNTPADFDFKLESLAQS 151

Query: 140 FSTLDDMAEHLATSVDIVFPVIHGQFGEDGRIQELLEKYNVPYVGTGSKECCQAFDKYKA 199
           FSTL D+AEHL+ +VDIVFPVIHG+FGEDG IQELLEKYNVP+VGTGS ECCQAFDKYKA
Sbjct: 152 FSTLADLAEHLSAAVDIVFPVIHGRFGEDGGIQELLEKYNVPFVGTGSSECCQAFDKYKA 211

Query: 200 SLELRQHGFVTVPSFLVQGHKTDKSELSEWFRKHQLDPDLGKVVVKPTRGGSSIGVGVAY 259
           S ELR+HGFVTVPSFLVQG++T+KSELSEWFRKHQLDPD GKVVVKPTRGGSSIGV VAY
Sbjct: 212 SSELRKHGFVTVPSFLVQGYETNKSELSEWFRKHQLDPDTGKVVVKPTRGGSSIGVTVAY 271

Query: 260 GVNDSLVKANEIMTEGIDNKVLIEIFLEGGSEFTAIVLDVGSGSDCCPVVLLPTEVELQF 319
           GVNDSLVKA+EIM+EGID+KVLIE+FLEGGSEFTAIVLDVGS SD  PV LLPTEVELQF
Sbjct: 272 GVNDSLVKASEIMSEGIDDKVLIELFLEGGSEFTAIVLDVGSSSDSFPVALLPTEVELQF 331

Query: 320 LGANDVKENDAIFNYRRKYLPTQQVAYHTPPRFPLDVIDNIRKGASLIFQRLCLQDFARI 379
           LG ND+KENDAIFNYRRKYLPTQQVAYHTPPRFPLDVI+NIRKGAS++FQ+L LQDFARI
Sbjct: 332 LGENDLKENDAIFNYRRKYLPTQQVAYHTPPRFPLDVIENIRKGASILFQQLHLQDFARI 391

Query: 380 DGWFLPNSDSKLSCSENEFGRTEAGTILFTDINLISGMEQTSFLFQQASKVGFSHKNILR 439
           DGWFLP+S  KLS SE+EFGR+E+GTI+FTDIN+ISGMEQTSFLFQQASKVGFSH NILR
Sbjct: 392 DGWFLPDSGCKLSSSESEFGRSESGTIIFTDINMISGMEQTSFLFQQASKVGFSHTNILR 451

Query: 440 SVVRHACLRFPNLPSESGISAQVPTRSKSFELNKAFPFPEGARKVFVIFGGDTSERQVSL 499
           S+V HACLRFPNL S SGIS+Q+P+RSKS ELNK+FP  EGA+KVFVIFGGDTSERQVSL
Sbjct: 452 SIVHHACLRFPNLASVSGISSQIPSRSKSSELNKSFPRREGAQKVFVIFGGDTSERQVSL 511

Query: 500 MSGTNVWLNLLAFHDLEVTPFLLASTSECESNVDMVKKADDVRDRTIWSLPYSLVLRHTT 559
           MSGTNVWLNLL F+DLEVTP LL+STS+  S+VD+  KADDV +RT+WSLPYSLVLRHTT
Sbjct: 512 MSGTNVWLNLLGFNDLEVTPCLLSSTSDYASSVDIGIKADDVWNRTVWSLPYSLVLRHTT 571

Query: 560 EEVLAACKEAIEPDRAALTSNLRKKVVNELMEGLKDHNWFTGFDIADELPMKFSLRLWIK 619
           EEVL AC EAIEP+RAALTS+LRK+V+N+LMEGLKDHNWFTGFDIA+ELP KFSLR WIK
Sbjct: 572 EEVLDACVEAIEPNRAALTSDLRKQVMNDLMEGLKDHNWFTGFDIANELPKKFSLREWIK 631

Query: 620 SAKEVQATVFIAVHGGIGEDGTLQSLLDAEGVPYTGPGAMASKICMDKVATSVALKHLAN 679
            AKEV+ATVFIAVHGGIGEDG LQSLLDAEGVPYTGPGA+ASKICMDKVATSVA+ HLAN
Sbjct: 632 LAKEVKATVFIAVHGGIGEDGRLQSLLDAEGVPYTGPGALASKICMDKVATSVAVNHLAN 691

Query: 680 FGVLTINKDVRRKDDLFDKPITDIWHDLTQKLQCETLCVKPARDGCSTGVARLCCSDDLA 739
            G+LTINK+V RKDDL +KPI DIWHDLTQKLQCETLCVKPARDGCSTGVARL CS+DLA
Sbjct: 692 LGILTINKEVWRKDDLSNKPINDIWHDLTQKLQCETLCVKPARDGCSTGVARLRCSNDLA 751

Query: 740 IYVKALEDCLLRIPPNSFSKAHSIIEMPNPPPELLIFEPFIETDEIVVTSKFK-ETGHDL 798
           IY+KALED LLRIPPNS SKAH +IEMPNPPPELLIFEPFIETDEI+V+SK K ETGH  
Sbjct: 752 IYIKALEDSLLRIPPNSLSKAHGMIEMPNPPPELLIFEPFIETDEIIVSSKVKNETGHGF 811

Query: 799 MWKGHSRWVEITVGVIGKRGSMHSLSPSVTVKETGDILSLEEKFQGGTGINLTPPPLSIM 858
           MWKG+SRWVEITVGVIGKRGSMHSLSPSVTVKETGDILSLEEKFQGGTGINLTPPPLSIM
Sbjct: 812 MWKGNSRWVEITVGVIGKRGSMHSLSPSVTVKETGDILSLEEKFQGGTGINLTPPPLSIM 871