Miyakogusa Predicted Gene

Lj1g3v2416610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2416610.1 Non Characterized Hit- tr|C5X6F1|C5X6F1_SORBI
Putative uncharacterized protein Sb02g043850
OS=Sorghu,44.62,8e-19,DUF588,Uncharacterised protein family UPF0497,
trans-membrane plant; seg,NULL,CUFF.29002.1
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g071110.1 | CASP-like protein | HC | chr7:26328733-2633072...   271   3e-73
Medtr4g013270.1 | CASP ARALYDRAFT-like protein | HC | chr4:36763...   182   2e-46
Medtr4g015730.1 | transmembrane protein, putative | LC | chr4:47...    71   7e-13
Medtr4g106940.1 | CASP ARALYDRAFT-like protein | HC | chr4:43951...    70   2e-12
Medtr3g078010.1 | CASP ARALYDRAFT-like protein | HC | chr3:35146...    61   8e-10
Medtr7g034390.2 | transmembrane protein, putative | HC | chr7:12...    54   7e-08
Medtr7g034390.1 | transmembrane protein, putative | HC | chr7:12...    54   8e-08

>Medtr7g071110.1 | CASP-like protein | HC | chr7:26328733-26330721 |
           20130731
          Length = 202

 Score =  271 bits (693), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 133/195 (68%), Positives = 145/195 (74%), Gaps = 5/195 (2%)

Query: 10  NSTPKIHVQTPPMAPAG---DRQAP--AASTGGVGGILRRWRREDLLKRGSLGLRGIALL 64
           +S PKIH++TPP AP     D Q P    +T G+ GILRRW+REDL+KRGSLGLRGI LL
Sbjct: 8   SSPPKIHIETPPTAPPASGEDHQTPHQTPATAGIAGILRRWKREDLIKRGSLGLRGIGLL 67

Query: 65  FSLISFIAMASNQHGDWREFDKYEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQLIQP 124
           FSLISFI MASN+HGDW++FDKYEEYRYLLAIAILS LYTGAQ FRQVHELSTGKQLI+P
Sbjct: 68  FSLISFIVMASNKHGDWKDFDKYEEYRYLLAIAILSSLYTGAQAFRQVHELSTGKQLIKP 127

Query: 125 RMAAMIDFIGDQXXXXXXXXXXXXXXPITNRMREGADNIFTDXXXXXXXXXXXXXLCLAL 184
           RMAA+IDF GDQ              PITNRMREGADNIFTD             LCL  
Sbjct: 128 RMAALIDFFGDQIMAYLLISSASSAIPITNRMREGADNIFTDASAAAISMSVFAFLCLGA 187

Query: 185 SALISGYKLSTQPYI 199
           SALISGYKLSTQ YI
Sbjct: 188 SALISGYKLSTQSYI 202


>Medtr4g013270.1 | CASP ARALYDRAFT-like protein | HC |
           chr4:3676397-3674459 | 20130731
          Length = 187

 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 86/168 (51%), Positives = 108/168 (64%)

Query: 27  DRQAPAASTGGVGGILRRWRREDLLKRGSLGLRGIALLFSLISFIAMASNQHGDWREFDK 86
           D    +AS+G   GIL+RW+RED LKR SLGLRG+ L FSL SF+ MASN+HG    FD 
Sbjct: 17  DMNPESASSGTSYGILQRWKREDSLKRASLGLRGVTLFFSLTSFLLMASNKHGYGENFDH 76

Query: 87  YEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQLIQPRMAAMIDFIGDQXXXXXXXXXX 146
           Y+EYRYLL +A  + +YTG+QV+RQ+HEL TG  + +P  AA+IDF+GDQ          
Sbjct: 77  YQEYRYLLVVAFFTSIYTGSQVYRQIHELITGNNIFRPTTAAVIDFVGDQVIAYLLISSA 136

Query: 147 XXXXPITNRMREGADNIFTDXXXXXXXXXXXXXLCLALSALISGYKLS 194
               P+T+RMRE  D+ FTD               LALSA+ISGYKLS
Sbjct: 137 STAVPLTDRMRENDDDAFTDASAATITMSFFAFTFLALSAIISGYKLS 184


>Medtr4g015730.1 | transmembrane protein, putative | LC |
          chr4:4743807-4743550 | 20130731
          Length = 85

 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 42/62 (67%)

Query: 27 DRQAPAASTGGVGGILRRWRREDLLKRGSLGLRGIALLFSLISFIAMASNQHGDWREFDK 86
          D     A++G   GIL+RW+RED LKR SLGLRG+  +F L SF+ +ASN HG W  FD 
Sbjct: 13 DMNLEPANSGTSYGILQRWKREDSLKRASLGLRGVYSIFLLTSFLLVASNNHGYWENFDH 72

Query: 87 YE 88
          ++
Sbjct: 73 HD 74


>Medtr4g106940.1 | CASP ARALYDRAFT-like protein | HC |
           chr4:43951134-43949095 | 20130731
          Length = 288

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)

Query: 45  WRREDLLK-RGSLGLRGIALLFSLISFIAMASNQHGDWR--EFDKYEEYRYLLAIAILSC 101
           W + D++  + +LG R   ++  LISF  MA+++   W    FD+Y+EYRY L++ ++  
Sbjct: 131 WSKSDVMTGKVALGFRISEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSMTVIGF 190

Query: 102 LYTGAQVFRQVHELSTGKQLIQPRMAAMIDFIGDQXXXXXXXXXXXXXXP-ITNRMREGA 160
           +Y G Q     ++L TGK ++   +    DF+ DQ                + +      
Sbjct: 191 VYAGFQACELGYQLITGKHIVNHHLRFHFDFLMDQVLAYLLISSASSAATRVDDWQSNWG 250

Query: 161 DNIFTDXXXXXXXXXXXXXLCLALSALISGYKL 193
            + FT+             +  A+S+LISGY L
Sbjct: 251 KDEFTEMASASIALAFLAFIAFAISSLISGYNL 283


>Medtr3g078010.1 | CASP ARALYDRAFT-like protein | HC |
           chr3:35146346-35143714 | 20130731
          Length = 296

 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 48  EDLLKRGSLGLRGIALLFSLISFIAMASNQHGDWR--EFDKYEEYRYLLAIAILSCLYTG 105
           E++ ++ +LG R   ++  LISF  MA+N+   W    +D+Y+EYRY L++ ++   Y  
Sbjct: 141 EEVTRKAALGFRLCEVVVCLISFSVMAANKTQGWSGDSYDRYKEYRYCLSVNVIGFAYAA 200

Query: 106 AQVFRQVHELSTGKQLIQPRMAAMIDFIGDQXXXXXXXXXXXXXXP-ITNRMREGADNIF 164
            Q      +L T K +I   +     F  DQ                + +       + F
Sbjct: 201 LQACDLAFQLVTEKHMISHHLRYHFQFFMDQVVAYLLISASSSAATRVDDWQSNWGKDEF 260

Query: 165 TDXXXXXXXXXXXXXLCLALSALISGYKLSTQ 196
           T+                A+S+LISGY L T+
Sbjct: 261 TEMATVSVGMSFLSFGAFAMSSLISGYILCTR 292


>Medtr7g034390.2 | transmembrane protein, putative | HC |
           chr7:12870052-12873486 | 20130731
          Length = 296

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 26  GDRQAPAASTGGVGGILR-------RWRREDLLKRGSLGLRGIALLFSLISFIAMASNQH 78
           G+R+  A S GGV   LR       R  +   L +  LGLR    +F L+S+  +A+++ 
Sbjct: 115 GEREQDATSGGGVKRGLRPDVKSLLRSEKVVSLNKVLLGLRVAGFVFCLVSWSVLAADRK 174

Query: 79  GDW--REFDKYEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQLIQPRMAAMIDFIGDQ 136
             W    F  Y+E+RY L++ ++  +Y+  Q+   V  L T K +++ ++     F  DQ
Sbjct: 175 KGWAIDSFYLYKEFRYSLSVNVIGFVYSAVQICDLVKYLITKKHIVEHKLRGYFTFALDQ 234


>Medtr7g034390.1 | transmembrane protein, putative | HC |
           chr7:12870132-12874317 | 20130731
          Length = 303

 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 26  GDRQAPAASTGGVGGILR-------RWRREDLLKRGSLGLRGIALLFSLISFIAMASNQH 78
           G+R+  A S GGV   LR       R  +   L +  LGLR    +F L+S+  +A+++ 
Sbjct: 115 GEREQDATSGGGVKRGLRPDVKSLLRSEKVVSLNKVLLGLRVAGFVFCLVSWSVLAADRK 174

Query: 79  GDW--REFDKYEEYRYLLAIAILSCLYTGAQVFRQVHELSTGKQLIQPRMAAMIDFIGDQ 136
             W    F  Y+E+RY L++ ++  +Y+  Q+   V  L T K +++ ++     F  DQ
Sbjct: 175 KGWAIDSFYLYKEFRYSLSVNVIGFVYSAVQICDLVKYLITKKHIVEHKLRGYFTFALDQ 234