Miyakogusa Predicted Gene

Lj1g3v2405410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2405410.1 Non Characterized Hit- tr|K4CRX8|K4CRX8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,42.61,7e-18,
,CUFF.28991.1
         (105 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g070530.1 | methyltransferase domain protein | HC | chr7:2...   122   8e-29
Medtr4g013290.1 | methyltransferase domain protein | HC | chr4:3...    97   4e-21
Medtr3g031200.1 | methyltransferase | HC | chr3:26958395-2695691...    72   2e-13

>Medtr7g070530.1 | methyltransferase domain protein | HC |
           chr7:26047730-26045559 | 20130731
          Length = 509

 Score =  122 bits (305), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 10/105 (9%)

Query: 1   MERTAGKFGSLRNLLIRFLISGVFIIAVRFAYVISIAGESCNVADFCFFSLPESLSHVIA 60
           ME  A K  S +NLLIR L++GVF+IAVRFAYVISIAGESCNVADFCFFSLPE++S  I+
Sbjct: 10  MEHAAAKPSSFQNLLIRLLLTGVFVIAVRFAYVISIAGESCNVADFCFFSLPETISLAIS 69

Query: 61  GTGPLAVESASGGSGLSPAELYTSKDWLDAVHFYSSAFQDLVAGG 105
           G  PL+ ES+SGG+  S            AV FYSS F+DL+ GG
Sbjct: 70  GNEPLSDESSSGGANTSSP----------AVAFYSSVFRDLIGGG 104


>Medtr4g013290.1 | methyltransferase domain protein | HC |
           chr4:3695664-3697901 | 20130731
          Length = 509

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 13/113 (11%)

Query: 1   MERTAGKFGSLRNLLIRFLISGVFIIAVRFAYVISIAGESCNVADFCFFSLPESLSHVIA 60
           ME T GK G LRN+LIR L+ GVFI+ +RFAYVI+IAGE+C + DFCFFS PE ++  +A
Sbjct: 1   MEPTVGKPGFLRNILIRLLLFGVFIVVIRFAYVITIAGETCKIGDFCFFSSPEKINVAVA 60

Query: 61  GTGPLAVESASGGSGLSPA--------ELYTSKDWLDAVHFYSSAFQDLVAGG 105
            TG     S SG   LS          E +TSKDW++ V FYSS FQ+L+A G
Sbjct: 61  VTG-----SDSGTGALSVRSSSELSSPEHHTSKDWINGVQFYSSVFQNLIAAG 108


>Medtr3g031200.1 | methyltransferase | HC | chr3:26958395-26956911 |
           20130731
          Length = 494

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 14/100 (14%)

Query: 6   GKFGSLRNLLIRFLISGVFIIAVRFAYVISIAGESCNVADFCFFSLPESLSHVIAGTGPL 65
            K G LRN+L+R     V I AVRFA +++I GESCN +DFC FS  E+L+        L
Sbjct: 2   AKHGFLRNILVRIFSFAVLIFAVRFAIIVTIHGESCNSSDFCIFS--ENLN--------L 51

Query: 66  AVESASGGSGLSPAELYTSKDWLDAVHFYSSAFQDLVAGG 105
              S    SG    + ++ K+W  +V  Y+S FQDL+  G
Sbjct: 52  TAPSHLSTSG----DPFSGKNWRRSVEHYASIFQDLIGEG 87