Miyakogusa Predicted Gene

Lj1g3v2404340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2404340.1 Non Characterized Hit- tr|I0Z0Y2|I0Z0Y2_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,31.44,0.000000000003,seg,NULL; DUF3110,Protein of unknown function
DUF3110,NODE_76863_length_1073_cov_37.132339.path1.1
         (271 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g042520.1 | plant/M4I22-120 protein, putative | HC | chr5:...   392   e-109
Medtr5g042520.2 | plant/M4I22-120 protein, putative | HC | chr5:...   254   7e-68

>Medtr5g042520.1 | plant/M4I22-120 protein, putative | HC |
           chr5:18685153-18680914 | 20130731
          Length = 265

 Score =  392 bits (1006), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/256 (78%), Positives = 218/256 (85%), Gaps = 6/256 (2%)

Query: 16  TNPFHRHTRRLALFSRHHRLPPRLASAPGTWRRRRNEISCSSLGAGKSDDXXXXXXXXXR 75
           TNPF RHTRRL+LFSRH  LPPRL S P     RR E+SC+ +G G +D          +
Sbjct: 16  TNPFRRHTRRLSLFSRH--LPPRLFSTPRVRTNRRKEVSCNVVGGGGAD-DGGNEEEVEK 72

Query: 76  ALHMDGAIPGNSDEFLKRVSSRAYDMRRHLHQSFDTSSYDVLDDNPWRETSKPVYVLTQK 135
           ALHMDG IPG+SDEFLK+VSSRAYDMRR+LHQSFD+SSYDVLDDNPWRETSKPVYVLTQK
Sbjct: 73  ALHMDGKIPGSSDEFLKQVSSRAYDMRRNLHQSFDSSSYDVLDDNPWRETSKPVYVLTQK 132

Query: 136 ENQLCTMKTRRNISEVERELGLLFPKGGSWRSGIGNQSKKVREGTKFQMLVEDIRDGVLV 195
           ENQLCTMKTRRNISEVERELGLLF KG + R+ I NQSK+ R GTKF M VEDIRDGVLV
Sbjct: 133 ENQLCTMKTRRNISEVERELGLLFSKGSNRRAAIENQSKQARGGTKFPMQVEDIRDGVLV 192

Query: 196 FEDENEAVKYCDLLEGGGQGCEGVAEIEASSVFDLCKKMRALAVIFRRGRTPPLPESLKL 255
           FEDENEA KYCDLL+G   GCEGVAEI+ASS+FDLCKKMRALAV+FRRGRTPP+PESLKL
Sbjct: 193 FEDENEAAKYCDLLQG---GCEGVAEIDASSIFDLCKKMRALAVLFRRGRTPPVPESLKL 249

Query: 256 NLRARKRSLEDQDDLI 271
           NLRARKRSLEDQDDLI
Sbjct: 250 NLRARKRSLEDQDDLI 265


>Medtr5g042520.2 | plant/M4I22-120 protein, putative | HC |
           chr5:18685153-18680914 | 20130731
          Length = 283

 Score =  254 bits (648), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 134/180 (74%), Positives = 147/180 (81%), Gaps = 3/180 (1%)

Query: 16  TNPFHRHTRRLALFSRHHRLPPRLASAPGTWRRRRNEISCSSLGAGKSDDXXXXXXXXXR 75
           TNPF RHTRRL+LFSRH  LPPRL S P     RR E+SC+ +G G +DD         +
Sbjct: 16  TNPFRRHTRRLSLFSRH--LPPRLFSTPRVRTNRRKEVSCNVVGGGGADDGGNEEEVE-K 72

Query: 76  ALHMDGAIPGNSDEFLKRVSSRAYDMRRHLHQSFDTSSYDVLDDNPWRETSKPVYVLTQK 135
           ALHMDG IPG+SDEFLK+VSSRAYDMRR+LHQSFD+SSYDVLDDNPWRETSKPVYVLTQK
Sbjct: 73  ALHMDGKIPGSSDEFLKQVSSRAYDMRRNLHQSFDSSSYDVLDDNPWRETSKPVYVLTQK 132

Query: 136 ENQLCTMKTRRNISEVERELGLLFPKGGSWRSGIGNQSKKVREGTKFQMLVEDIRDGVLV 195
           ENQLCTMKTRRNISEVERELGLLF KG + R+ I NQSK+ R GTKF M VEDIRDGVLV
Sbjct: 133 ENQLCTMKTRRNISEVERELGLLFSKGSNRRAAIENQSKQARGGTKFPMQVEDIRDGVLV 192