Miyakogusa Predicted Gene

Lj1g3v2379130.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2379130.3 tr|G7KTA8|G7KTA8_MEDTR Integrator complex subunit
OS=Medicago truncatula GN=MTR_7g070280 PE=4 SV=1,69.33,0,no
description,Armadillo-like helical; seg,NULL; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; ARM,CUFF.28984.3
         (898 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g070280.1 | ARM repeat protein | HC | chr7:25934408-259402...  1097   0.0  

>Medtr7g070280.1 | ARM repeat protein | HC | chr7:25934408-25940277
           | 20130731
          Length = 906

 Score = 1097 bits (2838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/901 (63%), Positives = 653/901 (72%), Gaps = 26/901 (2%)

Query: 2   DDTSEPEPETAPNQTQQQQPLSLHTLSSMRSLLINPSTPKRTVSSILETLTRSPQLTHHS 61
           DDT E EP+++       QPL+LH LSS+RSLLINPSTP  T+S IL+TLT S   +HH+
Sbjct: 3   DDTPEHEPDSS-------QPLTLHNLSSIRSLLINPSTPNTTLSQILKTLTNSQNPSHHT 55

Query: 62  LNLLSE--LATLNPSFTLDTLLPSAAESTTRLAVEALAALKPGCELDGETFVSLCFGPSV 119
           L LLS   L+ L  + T+D+L           ++  L + KP   LD E FVSLCFGPS+
Sbjct: 56  LTLLSHPSLSHLQTTTTVDSLA----------SISQLPSSKPFV-LDDERFVSLCFGPSI 104

Query: 120 PARLWMLRNAGLGYRVRPALLFPVLLGFTRDPFPYVREASLEGLVRLSECGEFQDLGLVK 179
             R+WMLRNAGLG+ VRPALLF VLLGFT DP+P VR ASLEGLVRLSECGEF D+ ++ 
Sbjct: 105 SGRVWMLRNAGLGFNVRPALLFTVLLGFTNDPYPNVRAASLEGLVRLSECGEFNDVSMIN 164

Query: 180 GCYQRAVQLLGDVEGCVRISALRVVASWGLMLAAFNADMKVYWSNEVFAKLCSAARDMSM 239
           GCYQR VQLL D+E  VR++A+RVV SWGLML+AFNADMK YW N+VFAKLCS ARDMSM
Sbjct: 165 GCYQRGVQLLNDMEDDVRLAAVRVVTSWGLMLSAFNADMKAYWGNDVFAKLCSMARDMSM 224

Query: 240 KVRVEAFNGLRKMEVVSEDILMQXXXXXXXXXXXXXXXXDERKSEQFVMLAPSVAGALVH 299
           KVRVEAFNGL KME+VS+D L+Q                D+  SEQF  LA +VAGALVH
Sbjct: 225 KVRVEAFNGLAKMEIVSKDFLLQSLSKKVLGNGKQKETLDQSTSEQFAKLASNVAGALVH 284

Query: 300 GLEDEFFEVRKAACQSLHRLTILSAKFACEAXXXXXXXXXXXSVVVRFQALETMHHMAIN 359
           GLEDEFFEVRK+ACQSLHRLTILS +FA E            S+VVR Q LETMH MAIN
Sbjct: 285 GLEDEFFEVRKSACQSLHRLTILSVEFARETLDLLMDMLNDDSMVVRLQTLETMHRMAIN 344

Query: 360 GCLKLQEKHVHMFLGALVDCSWEVRHAERKILKIVKLNDLALFKSSIDRLLENLQSYSQD 419
            CLKLQEKH+HMFLGAL+D S EVR AERKILKIVKLN+LA+FKSSIDRLLENL  Y+QD
Sbjct: 345 SCLKLQEKHLHMFLGALLDNSREVRCAERKILKIVKLNNLAMFKSSIDRLLENLDRYAQD 404

Query: 420 EADVFSAFSHLGRNHKKFVGLIMRETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNA 479
           EADVFS  S+LGRNHKKFV  I++ET                               FN 
Sbjct: 405 EADVFSVCSNLGRNHKKFVCSIIKETFEEVEASFDGNVEFKSGRIAALLIISISAPLFNE 464

Query: 480 DIGSIPPLMFSYAVTLLGRIYYAFSDIMDRDALLAYLCERSRSTAYSAANINLEEGKQQL 539
           D+ SIPP+MFSYAVTLLGRIY AFSDIMDRDALLAYLCE+SR  +YS +NIN  EG QQL
Sbjct: 465 DVCSIPPVMFSYAVTLLGRIYCAFSDIMDRDALLAYLCEKSRPPSYSTSNINHGEGDQQL 524

Query: 540 PLSEGDAANLSSNEVMDSIMVSHIMREQKEVANYQVEQNQSLHNEVTNFTNYILDKFPGL 599
           PL EGD  N +SN V+DS + S IM+EQKEVANYQVEQ+QS  +EVT   NYIL KFP +
Sbjct: 525 PLIEGDTPNCASNGVIDSTIASEIMKEQKEVANYQVEQHQSEDSEVTTVVNYILAKFPDM 584

Query: 600 WSMIQTGGTNEVLRSFRCLKEDLALLKFDSLGSGDALAFTVLYLRNITLLVEVWEHLHLG 659
           W M +TG TNEVL   RCLK++LA LKFDSLGS DALAFT+LYLR I LLVEVWEHL LG
Sbjct: 585 WQMTETGLTNEVL---RCLKDELATLKFDSLGSDDALAFTLLYLRIIKLLVEVWEHLSLG 641

Query: 660 PANGLSSCGTVLESKLQKLDRRAKEFLSRFVGFTAXXXXXXXXXXXVTYALRLYKVETSC 719
             +     G  LE KL+KLDRR KE +S+FVGF+A           VTYALRL KVET C
Sbjct: 642 KGSYSHGMGE-LEFKLRKLDRRVKELMSKFVGFSAEEELNILEIILVTYALRLCKVETIC 700

Query: 720 LSLTLERLTAIYLRFVSILKEKSSLPSNFVAELGKLLHEC--TSTYEASCSPLELDKCLK 777
           ++L  +RLT+IY    SILKE+S  P+NFV EL KLLHEC  TS   ASCSPL+ D+CLK
Sbjct: 701 VNLAFKRLTSIYSCVESILKERSDSPTNFVVELRKLLHECQTTSINGASCSPLQFDRCLK 760

Query: 778 LFSLKQFMFHGGIRHVKAELSIPNNDSEHHLTFVSGLPVGIQCEITLHNVLCDSRLWLRM 837
           LFSLK+F+FHG IR +KAEL I NNDS H   FVSGLPV I CEITLHN++   +LWLRM
Sbjct: 761 LFSLKKFVFHGTIRQLKAELRISNNDSLHPFPFVSGLPVSIPCEITLHNIISKCKLWLRM 820

Query: 838 SVDDGSTQYVFLDLDRFEGSREVRKLAFVVPFYRTPKANSLKLKVSIGLECMFENVCPVQ 897
           S+DDG  QY+FLDLD   GS +VR   F  PFYRTPKANS  LKV I LEC+FENVCPVQ
Sbjct: 821 SLDDGLVQYIFLDLDHLVGSGDVRNFVFAAPFYRTPKANSFTLKVCISLECLFENVCPVQ 880

Query: 898 R 898
           R
Sbjct: 881 R 881