Miyakogusa Predicted Gene
- Lj1g3v2379130.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2379130.3 tr|G7KTA8|G7KTA8_MEDTR Integrator complex subunit
OS=Medicago truncatula GN=MTR_7g070280 PE=4 SV=1,69.33,0,no
description,Armadillo-like helical; seg,NULL; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; ARM,CUFF.28984.3
(898 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g070280.1 | ARM repeat protein | HC | chr7:25934408-259402... 1097 0.0
>Medtr7g070280.1 | ARM repeat protein | HC | chr7:25934408-25940277
| 20130731
Length = 906
Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/901 (63%), Positives = 653/901 (72%), Gaps = 26/901 (2%)
Query: 2 DDTSEPEPETAPNQTQQQQPLSLHTLSSMRSLLINPSTPKRTVSSILETLTRSPQLTHHS 61
DDT E EP+++ QPL+LH LSS+RSLLINPSTP T+S IL+TLT S +HH+
Sbjct: 3 DDTPEHEPDSS-------QPLTLHNLSSIRSLLINPSTPNTTLSQILKTLTNSQNPSHHT 55
Query: 62 LNLLSE--LATLNPSFTLDTLLPSAAESTTRLAVEALAALKPGCELDGETFVSLCFGPSV 119
L LLS L+ L + T+D+L ++ L + KP LD E FVSLCFGPS+
Sbjct: 56 LTLLSHPSLSHLQTTTTVDSLA----------SISQLPSSKPFV-LDDERFVSLCFGPSI 104
Query: 120 PARLWMLRNAGLGYRVRPALLFPVLLGFTRDPFPYVREASLEGLVRLSECGEFQDLGLVK 179
R+WMLRNAGLG+ VRPALLF VLLGFT DP+P VR ASLEGLVRLSECGEF D+ ++
Sbjct: 105 SGRVWMLRNAGLGFNVRPALLFTVLLGFTNDPYPNVRAASLEGLVRLSECGEFNDVSMIN 164
Query: 180 GCYQRAVQLLGDVEGCVRISALRVVASWGLMLAAFNADMKVYWSNEVFAKLCSAARDMSM 239
GCYQR VQLL D+E VR++A+RVV SWGLML+AFNADMK YW N+VFAKLCS ARDMSM
Sbjct: 165 GCYQRGVQLLNDMEDDVRLAAVRVVTSWGLMLSAFNADMKAYWGNDVFAKLCSMARDMSM 224
Query: 240 KVRVEAFNGLRKMEVVSEDILMQXXXXXXXXXXXXXXXXDERKSEQFVMLAPSVAGALVH 299
KVRVEAFNGL KME+VS+D L+Q D+ SEQF LA +VAGALVH
Sbjct: 225 KVRVEAFNGLAKMEIVSKDFLLQSLSKKVLGNGKQKETLDQSTSEQFAKLASNVAGALVH 284
Query: 300 GLEDEFFEVRKAACQSLHRLTILSAKFACEAXXXXXXXXXXXSVVVRFQALETMHHMAIN 359
GLEDEFFEVRK+ACQSLHRLTILS +FA E S+VVR Q LETMH MAIN
Sbjct: 285 GLEDEFFEVRKSACQSLHRLTILSVEFARETLDLLMDMLNDDSMVVRLQTLETMHRMAIN 344
Query: 360 GCLKLQEKHVHMFLGALVDCSWEVRHAERKILKIVKLNDLALFKSSIDRLLENLQSYSQD 419
CLKLQEKH+HMFLGAL+D S EVR AERKILKIVKLN+LA+FKSSIDRLLENL Y+QD
Sbjct: 345 SCLKLQEKHLHMFLGALLDNSREVRCAERKILKIVKLNNLAMFKSSIDRLLENLDRYAQD 404
Query: 420 EADVFSAFSHLGRNHKKFVGLIMRETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNA 479
EADVFS S+LGRNHKKFV I++ET FN
Sbjct: 405 EADVFSVCSNLGRNHKKFVCSIIKETFEEVEASFDGNVEFKSGRIAALLIISISAPLFNE 464
Query: 480 DIGSIPPLMFSYAVTLLGRIYYAFSDIMDRDALLAYLCERSRSTAYSAANINLEEGKQQL 539
D+ SIPP+MFSYAVTLLGRIY AFSDIMDRDALLAYLCE+SR +YS +NIN EG QQL
Sbjct: 465 DVCSIPPVMFSYAVTLLGRIYCAFSDIMDRDALLAYLCEKSRPPSYSTSNINHGEGDQQL 524
Query: 540 PLSEGDAANLSSNEVMDSIMVSHIMREQKEVANYQVEQNQSLHNEVTNFTNYILDKFPGL 599
PL EGD N +SN V+DS + S IM+EQKEVANYQVEQ+QS +EVT NYIL KFP +
Sbjct: 525 PLIEGDTPNCASNGVIDSTIASEIMKEQKEVANYQVEQHQSEDSEVTTVVNYILAKFPDM 584
Query: 600 WSMIQTGGTNEVLRSFRCLKEDLALLKFDSLGSGDALAFTVLYLRNITLLVEVWEHLHLG 659
W M +TG TNEVL RCLK++LA LKFDSLGS DALAFT+LYLR I LLVEVWEHL LG
Sbjct: 585 WQMTETGLTNEVL---RCLKDELATLKFDSLGSDDALAFTLLYLRIIKLLVEVWEHLSLG 641
Query: 660 PANGLSSCGTVLESKLQKLDRRAKEFLSRFVGFTAXXXXXXXXXXXVTYALRLYKVETSC 719
+ G LE KL+KLDRR KE +S+FVGF+A VTYALRL KVET C
Sbjct: 642 KGSYSHGMGE-LEFKLRKLDRRVKELMSKFVGFSAEEELNILEIILVTYALRLCKVETIC 700
Query: 720 LSLTLERLTAIYLRFVSILKEKSSLPSNFVAELGKLLHEC--TSTYEASCSPLELDKCLK 777
++L +RLT+IY SILKE+S P+NFV EL KLLHEC TS ASCSPL+ D+CLK
Sbjct: 701 VNLAFKRLTSIYSCVESILKERSDSPTNFVVELRKLLHECQTTSINGASCSPLQFDRCLK 760
Query: 778 LFSLKQFMFHGGIRHVKAELSIPNNDSEHHLTFVSGLPVGIQCEITLHNVLCDSRLWLRM 837
LFSLK+F+FHG IR +KAEL I NNDS H FVSGLPV I CEITLHN++ +LWLRM
Sbjct: 761 LFSLKKFVFHGTIRQLKAELRISNNDSLHPFPFVSGLPVSIPCEITLHNIISKCKLWLRM 820
Query: 838 SVDDGSTQYVFLDLDRFEGSREVRKLAFVVPFYRTPKANSLKLKVSIGLECMFENVCPVQ 897
S+DDG QY+FLDLD GS +VR F PFYRTPKANS LKV I LEC+FENVCPVQ
Sbjct: 821 SLDDGLVQYIFLDLDHLVGSGDVRNFVFAAPFYRTPKANSFTLKVCISLECLFENVCPVQ 880
Query: 898 R 898
R
Sbjct: 881 R 881