Miyakogusa Predicted Gene

Lj1g3v2375850.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2375850.2 Non Characterized Hit- tr|I1JEK1|I1JEK1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,72.5,0.000007,seg,NULL,CUFF.28965.2
         (67 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g048180.3 | BSD domain protein | HC | chr5:21092681-210964...    48   2e-06

>Medtr5g048180.3 | BSD domain protein | HC | chr5:21092681-21096453
           | 20130731
          Length = 286

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 9   TGKAEATEXXXXXXXXXXXTEQDFDSFLLGDLEDNDGGPG-FFAPLICVVGLDFATH 64
           +GKAE T            TEQD D+FLLGDLED+D  PG FF      + +D  TH
Sbjct: 225 SGKAEVTGKIVSKSSNSSSTEQDLDTFLLGDLEDSDEAPGMFFNQKFVNIYIDTHTH 281