Miyakogusa Predicted Gene

Lj1g3v2372130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2372130.1 Non Characterized Hit- tr|B9T1I6|B9T1I6_RICCO
Protein sco1, putative OS=Ricinus communis
GN=RCOM_018,80,0,SCO1/SENC,Copper chaperone SCO1/SenC;
SCO1-SenC,Copper chaperone SCO1/SenC;
Thioredoxin-like,Thiored,CUFF.28928.1
         (195 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g069070.1 | electron transport SCO1/SenC family protein, p...   338   2e-93
Medtr8g090295.1 | electron transport SCO1/SenC family protein, p...   167   4e-42
Medtr8g090295.2 | electron transport SCO1/SenC family protein, p...    98   6e-21

>Medtr7g069070.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr7:25419911-25424053 | 20130731
          Length = 329

 Score =  338 bits (866), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 158/179 (88%), Positives = 167/179 (93%)

Query: 15  DINNASEAVKHGPSAGKAAIGGPFHLTNHHGKRVTEKDFLGKWTVMYFGFTHCPDICPDE 74
           DI N SEAVK GPSAGKAAIGGPF LTNHHGKRVT+KDF+GKWT+MYFGFTHCPDICP+E
Sbjct: 149 DIQNVSEAVKQGPSAGKAAIGGPFELTNHHGKRVTDKDFMGKWTLMYFGFTHCPDICPEE 208

Query: 75  LQKLAVAVDKIKEKSGIEIVPVFISVDPERDTVEQVSEYVKEFHPKLIGLTGSSDEIKSV 134
           LQKL  AVDKIKEKSGIE VPVFISVDPERDTVEQV+EYVKEFHPKLIGLTGS DEIKSV
Sbjct: 209 LQKLVAAVDKIKEKSGIETVPVFISVDPERDTVEQVAEYVKEFHPKLIGLTGSPDEIKSV 268

Query: 135 ARAYRVYYMKTAEEDSDYLVDHSIVMYLMGPDMNYVKFFGKNNDADSLADGIVKEIKQY 193
           ARAYRVYYMKTAEEDSDYLVDHSIV+YLM PDM +VKFFGKNND DSLADG++KEIK Y
Sbjct: 269 ARAYRVYYMKTAEEDSDYLVDHSIVIYLMAPDMGFVKFFGKNNDVDSLADGVIKEIKPY 327


>Medtr8g090295.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr8:37944701-37948024 | 20130731
          Length = 271

 Score =  167 bits (424), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 73/159 (45%), Positives = 111/159 (69%)

Query: 34  IGGPFHLTNHHGKRVTEKDFLGKWTVMYFGFTHCPDICPDELQKLAVAVDKIKEKSGIEI 93
           IGGPF L N   + VTE++FLG W ++YFG+T  PDI P+++Q +A A D ++ K  ++I
Sbjct: 110 IGGPFTLVNKEKQTVTERNFLGNWVLLYFGYTSSPDIGPEQVQLMAKATDILESKQNLKI 169

Query: 94  VPVFISVDPERDTVEQVSEYVKEFHPKLIGLTGSSDEIKSVARAYRVYYMKTAEEDSDYL 153
           +PVF+++DP+RDT  Q+  Y++EF+ ++IGLTG    I+ +A+ YRVY+ K  E+  DYL
Sbjct: 170 LPVFVTIDPQRDTPSQLRAYLEEFNSRIIGLTGPVAAIRQMAQQYRVYFKKVEEDGGDYL 229

Query: 154 VDHSIVMYLMGPDMNYVKFFGKNNDADSLADGIVKEIKQ 192
           VD S  MYL+ PDM  V+ FG   +A+ L++ I KE+ +
Sbjct: 230 VDSSHNMYLLSPDMEVVRCFGVEYNAEQLSEAIWKELNK 268


>Medtr8g090295.2 | electron transport SCO1/SenC family protein,
           putative | HC | chr8:37944701-37947271 | 20130731
          Length = 192

 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 60/82 (73%)

Query: 34  IGGPFHLTNHHGKRVTEKDFLGKWTVMYFGFTHCPDICPDELQKLAVAVDKIKEKSGIEI 93
           IGGPF L N   + VTE++FLG W ++YFG+T  PDI P+++Q +A A D ++ K  ++I
Sbjct: 110 IGGPFTLVNKEKQTVTERNFLGNWVLLYFGYTSSPDIGPEQVQLMAKATDILESKQNLKI 169

Query: 94  VPVFISVDPERDTVEQVSEYVK 115
           +PVF+++DP+RDT  Q+  Y++
Sbjct: 170 LPVFVTIDPQRDTPSQLRAYLE 191