Miyakogusa Predicted Gene
- Lj1g3v2370090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2370090.1 Non Characterized Hit- tr|I1JLD2|I1JLD2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6433
PE=,85.61,0,Acyl-CoA_dh_N,Acyl-CoA dehydrogenase, N-terminal;
Acyl-CoA_dh_1,Acyl-CoA oxidase/dehydrogenase, type,CUFF.28933.1
(413 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g068850.1 | acyl-CoA dehydrogenase | HC | chr7:25296388-25... 749 0.0
Medtr4g060480.1 | acyl-CoA dehydrogenase | HC | chr4:22246164-22... 137 2e-32
Medtr0837s0010.1 | acyl-CoA dehydrogenase | LC | scaffold0837:19... 132 8e-31
Medtr4g060480.2 | acyl-CoA dehydrogenase | HC | chr4:22246164-22... 121 1e-27
Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC | chr4:30622... 67 3e-11
Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC | chr8:38035... 64 3e-10
Medtr4g100640.1 | peroxisomal acyl-coenzyme A oxidase-like prote... 62 1e-09
Medtr4g100640.2 | peroxisomal acyl-coenzyme A oxidase-like prote... 62 2e-09
Medtr5g012920.1 | peroxisomal acyl-coenzyme A oxidase-like prote... 54 3e-07
>Medtr7g068850.1 | acyl-CoA dehydrogenase | HC |
chr7:25296388-25301382 | 20130731
Length = 433
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/414 (86%), Positives = 377/414 (91%), Gaps = 1/414 (0%)
Query: 1 MTGPNP-DMNSKMPSYFNLPALDVSVAFPQATPASTFPPCASDYFQFDDLLTPEEQAVRM 59
MT NP D MPSYF+LP LDVS+AFPQATPASTFPPCASDYFQFDDLL PEEQA+RM
Sbjct: 1 MTRSNPQDKIGNMPSYFDLPPLDVSLAFPQATPASTFPPCASDYFQFDDLLKPEEQAIRM 60
Query: 60 KVRKCMEKEIAPIMTQYWEKANFPFHVIPKFAELHIAGGTIKGYGCPGLSMLGSXXXXXX 119
KVR+CMEK IAPIMTQYWEKA FPFH IPK EL IAGGTIKGYGCPGLS+ GS
Sbjct: 61 KVRECMEKNIAPIMTQYWEKAEFPFHAIPKLGELGIAGGTIKGYGCPGLSVTGSAIATAE 120
Query: 120 XXXXXXSFSVFILVHSCLAMLTIALCGSEAQKQKYLPSLAELKTISCWALTEPDYGSDAS 179
S S FILVHS LAMLTIALCGSEAQKQKYLPSLA+LKTI+CWALTEPDYGSDAS
Sbjct: 121 VARVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLKTIACWALTEPDYGSDAS 180
Query: 180 SLKTTATKVEGGWILEGQKRWIGNSTFADLLVIFARNTTTNQINGYIVKKDAPGLTATKI 239
+LKTTATKVEGGWILEGQKRWIGNSTFADLLVIFARNT+TNQINGYIVKKDAPGLT TKI
Sbjct: 181 ALKTTATKVEGGWILEGQKRWIGNSTFADLLVIFARNTSTNQINGYIVKKDAPGLTVTKI 240
Query: 240 ENKIGLRIVQNGDIVLKKLFVPDEDRIAELNSFQDTNKVLAASRVMVCWQPIGVSMGIYD 299
ENKIGLRIVQNGDIV++K+FVPDEDRI +NSFQDTNKVLA SRVMV WQPIG+SMGIYD
Sbjct: 241 ENKIGLRIVQNGDIVMRKVFVPDEDRIEGVNSFQDTNKVLAVSRVMVAWQPIGISMGIYD 300
Query: 300 MCHRYLKERKQFGAPLAAFQINQQKLVQMLGNVQAMVLVGWRLCKLYESGKLTPGHASLG 359
MCHRYLKERKQFGAPLAAFQINQQKLVQML NVQAM+LVGWRLCKLYESGK+TPGHASLG
Sbjct: 301 MCHRYLKERKQFGAPLAAFQINQQKLVQMLSNVQAMILVGWRLCKLYESGKMTPGHASLG 360
Query: 360 KSWISLRARETAALGRELLGGNGILADYLVAKAFCDLEPIYTFEGTYDINTLVT 413
KSWI+LRARETAALGRELLGGNGILAD+LVAKAFCDLEPIYT+EGTY+INTLVT
Sbjct: 361 KSWITLRARETAALGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYEINTLVT 414
>Medtr4g060480.1 | acyl-CoA dehydrogenase | HC |
chr4:22246164-22240641 | 20130731
Length = 417
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 4/283 (1%)
Query: 134 HSCLAMLTIALCGSEAQKQKYLPSLAELKTISCWALTEPDYGSDASSLKTTATKVEGGWI 193
HS L + + GS QKQKYLP L + A++EP+ GSD S+K A +V+GG++
Sbjct: 126 HSNLCINQLVRNGSHEQKQKYLPKLISGDHVGALAMSEPNSGSDVVSMKCKADRVDGGYV 185
Query: 194 LEGQKRWIGNSTFADLLVIFARNTTT---NQINGYIVKKDAPGLTATKIENKIGLRIVQN 250
L G K W N A LV++A+ T I +I++K PG + + +K+G+R
Sbjct: 186 LNGNKMWCTNGPTAQTLVVYAKTDATAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 245
Query: 251 GDIVLKKLFVPDEDRIA-ELNSFQDTNKVLAASRVMVCWQPIGVSMGIYDMCHRYLKERK 309
++V + FVP+E+ + E L R+++ P+G+ D+ Y+++R+
Sbjct: 246 CELVFENCFVPEENVLGKEGKGVYVMMSGLDLERLVLAAGPLGIMQSCLDVVLPYVRQRE 305
Query: 310 QFGAPLAAFQINQQKLVQMLGNVQAMVLVGWRLCKLYESGKLTPGHASLGKSWISLRARE 369
QFG P+ FQ Q K+ M ++Q+ + + + ++GK+ P + + RA +
Sbjct: 306 QFGRPIGEFQFIQGKVADMYTSLQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQ 365
Query: 370 TAALGRELLGGNGILADYLVAKAFCDLEPIYTFEGTYDINTLV 412
A + LGGNG + +Y + D + GT +I ++
Sbjct: 366 VALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMI 408
>Medtr0837s0010.1 | acyl-CoA dehydrogenase | LC |
scaffold0837:1908-239 | 20130731
Length = 545
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 185/401 (46%), Gaps = 29/401 (7%)
Query: 20 ALDVSVAFPQATPASTFPPCASDYFQFDDLLTPEEQAVRMKVRKCMEKEIAPIMTQYWEK 79
A+ + P+ P T P + TPE +A R +VR+ +KEIAP Q WE
Sbjct: 2 AIKAITSLPKVVPMLTLP---------RPIFTPEHEAFREQVRRFCDKEIAPHHAQ-WEH 51
Query: 80 ANFPFHVIPKFAELHIAGGTIKGYGC--------PGLSMLGSXXXXXXXXXXXXSFSVFI 131
H++P AEL G C PG +L + F
Sbjct: 52 D----HLVP--AELWRKAGEYALLCCWIGEEDGGPGGDLLFDFIVCEELGRVGATGPGFP 105
Query: 132 LVHSCLAMLTIALCGSEAQKQKYLPSLAELKTISCWALTEPDYGSDASSLKTTATKVEGG 191
L HS + IA G+ A K++ LP +A + I A+TEP GSD ++++TTA +
Sbjct: 106 L-HSVIVAPYIAHHGTPALKKRMLPGMACGEKIGAIAMTEPSAGSDVAAIRTTAKEDGDS 164
Query: 192 WILEGQKRWIGNSTFADLLVIFARNTTTNQING---YIVKKDAPGLTATKIENKIGLRIV 248
W++ GQK +I N ++++V+ + + G ++V+ DAPG + + +KIG
Sbjct: 165 WVINGQKTFITNGYNSNVIVLACKTDQSQGARGISLFVVEADAPGFSRGRNLDKIGQYAQ 224
Query: 249 QNGDIVLKKLFVPDEDRIAEL-NSFQDTNKVLAASRVMVCWQPIGVSMGIYDMCHRYLKE 307
++ + VP E+ + + F+ + LA R++V Q + ++ +Y+++
Sbjct: 225 DTAELFFDDVRVPRENLLGVVGEGFRYLMQGLAQERLLVSVQCQSRAESAFEWTTQYVRD 284
Query: 308 RKQFGAPLAAFQINQQKLVQMLGNVQAMVLVGWRLCKLYESGKLTPGHASLGKSWISLRA 367
RK F PL+ Q + K+ ++ ++QA +L +L+ G+L AS GK W S
Sbjct: 285 RKAFNQPLSNLQNTRFKMAELAADLQAGRAYCDQLIQLHMVGQLDAATASAGKLWHSELL 344
Query: 368 RETAALGRELLGGNGILADYLVAKAFCDLEPIYTFEGTYDI 408
+L GG G + +Y +A+A+ D + GT +I
Sbjct: 345 GRVTDTCLQLHGGYGYMREYPIARAYVDARIERIYAGTSEI 385
>Medtr4g060480.2 | acyl-CoA dehydrogenase | HC |
chr4:22246164-22242077 | 20130731
Length = 332
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 4/205 (1%)
Query: 134 HSCLAMLTIALCGSEAQKQKYLPSLAELKTISCWALTEPDYGSDASSLKTTATKVEGGWI 193
HS L + + GS QKQKYLP L + A++EP+ GSD S+K A +V+GG++
Sbjct: 126 HSNLCINQLVRNGSHEQKQKYLPKLISGDHVGALAMSEPNSGSDVVSMKCKADRVDGGYV 185
Query: 194 LEGQKRWIGNSTFADLLVIFARNTTT---NQINGYIVKKDAPGLTATKIENKIGLRIVQN 250
L G K W N A LV++A+ T I +I++K PG + + +K+G+R
Sbjct: 186 LNGNKMWCTNGPTAQTLVVYAKTDATAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 245
Query: 251 GDIVLKKLFVPDEDRIA-ELNSFQDTNKVLAASRVMVCWQPIGVSMGIYDMCHRYLKERK 309
++V + FVP+E+ + E L R+++ P+G+ D+ Y+++R+
Sbjct: 246 CELVFENCFVPEENVLGKEGKGVYVMMSGLDLERLVLAAGPLGIMQSCLDVVLPYVRQRE 305
Query: 310 QFGAPLAAFQINQQKLVQMLGNVQA 334
QFG P+ FQ Q K+ M ++Q+
Sbjct: 306 QFGRPIGEFQFIQGKVADMYTSLQS 330
>Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC |
chr4:30622603-30615873 | 20130731
Length = 678
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 139/329 (42%), Gaps = 46/329 (13%)
Query: 126 SFSVFILVHSCLAMLTIALCGSEAQKQKYLPSLAELKTISCWALTEPDYGSDASSLKTTA 185
S +V + VH L + G++ K+L + C+A++E +GS+ ++T
Sbjct: 146 SLAVKLGVHIFLWGGAVKFLGTKRHHDKWLRATENYDIKGCFAMSELGHGSNVRGIETVT 205
Query: 186 T--KVEGGWILE-----GQKRWIGN-STFADLLVIFAR---NTTTNQINGYIVK-KDA-- 231
T + G +++ QK WIG + A ++F++ N + ++ +I + +D+
Sbjct: 206 TYDPISGEFVINTPCESAQKYWIGGAANHATHTIVFSQLNINGSNQGVHAFIAQIRDSDG 265
Query: 232 ---PGLTATKIENKIGLRIVQNGDIVLKKLFVPDEDRIAE----------LNSFQDTNKV 278
P + + +KIGL V NG I + +P E+ + L++ ++T++
Sbjct: 266 NICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSMADVSPSGEYLSAIKNTDQR 325
Query: 279 LAA-------SRVMVCWQPIGVSMGIYDMCHRYLKERKQFGAP-------LAAFQINQQK 324
AA RV + + +S + RY R+ F L + +QQ+
Sbjct: 326 FAAFLAPLTSGRVTIAVSSVYISKISLAIAIRYALTRRAFSITPNGPEVLLLDYPSHQQR 385
Query: 325 LVQMLGNVQAMVLVGWRLCKLY-----ESGKLTPGHASLGKSWISLRARETAALGRELLG 379
L+ +L + AM L KLY ES K +S K+ + T RE G
Sbjct: 386 LLPLLAKIYAMSFSAIELKKLYVNRTPESNKAIHIVSSAYKATFTWNNMRTLQECREACG 445
Query: 380 GNGILADYLVAKAFCDLEPIYTFEGTYDI 408
G G+ + + + + + TFEG ++
Sbjct: 446 GQGVKTENRIGQFKGEYDVHSTFEGDNNV 474
>Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC |
chr8:38035172-38040185 | 20130731
Length = 689
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 127/318 (39%), Gaps = 62/318 (19%)
Query: 146 GSEAQKQKYLPSLAELKTISCWALTEPDYGSDASSLKTTAT--KVEGGWILE-----GQK 198
G++ K KY + L C+A+TE +GS+ L+T AT + +I++ K
Sbjct: 158 GTQKHKDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTLATFDPITDEFIIDTPNDGAIK 217
Query: 199 RWIGN-STFADLLVIFARNTTTNQ---------INGYIV-------KKDAPGLTATKIEN 241
WIGN + +FAR N ++ +IV + PG+ +
Sbjct: 218 WWIGNAAVHGKFATVFARLKLPNYDAKGVSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGH 277
Query: 242 KIGLRIVQNGDIVLKKLFVPDEDRIAELNSFQDTNK--------------------VLAA 281
K+GL V NG + + + +P ++ LN F D ++ L
Sbjct: 278 KVGLNGVDNGALRFRSVRIPRDNL---LNRFGDVSRDGKYTSTLPSVNKRFGATLGELVG 334
Query: 282 SRVMVCWQPIGVSMGIYDMCHRYLKERKQFG------APLAAFQINQQKLVQMLGNVQAM 335
RV + + + V + RY R+QFG + +Q +Q KL+ ML + A
Sbjct: 335 GRVGLAYSSVSVLKVSATIAIRYSLLRQQFGPRDQPEVTILDYQSHQHKLMPMLASTYAF 394
Query: 336 VLVGWRLCKLYESGKLTPG-------HA-SLG-KSWISLRARETAALGRELLGGNGILAD 386
L + Y K + HA S G K++++ ++ ++ RE GG+G A
Sbjct: 395 HFATTNLVEKYAQMKKSHDEELVADVHALSAGLKAYVTSYTAKSLSICREACGGHGYAAV 454
Query: 387 YLVAKAFCDLEPIYTFEG 404
D + TFEG
Sbjct: 455 NRFGSLRNDHDIFQTFEG 472
>Medtr4g100640.1 | peroxisomal acyl-coenzyme A oxidase-like protein
| HC | chr4:41511892-41519080 | 20130731
Length = 664
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 137/335 (40%), Gaps = 67/335 (20%)
Query: 130 FILVHSCLAMLTIALCGSEAQKQKYLPSLAELKTISCWALTEPDYGSDASSLKTTAT--- 186
F +H + + I G+E Q+QK+LP ++ I C+A TE +GS+ L+TTAT
Sbjct: 98 FTDLHWGMFIPAIKGQGTEEQQQKWLPLAQRMQIIGCYAQTELGHGSNVQGLETTATFDP 157
Query: 187 KVEGGWI----LEGQKRWIGN----STFADLLVIFARNTTTNQ---INGYIVKKDA---- 231
K + I L K W G ST A V++AR T + ++G+IV+ +
Sbjct: 158 KTDEFVIHSPTLTSSKWWPGGLGKVSTHA---VVYARLITDGRDHGVHGFIVQLRSLDDH 214
Query: 232 ---PGLTATKIENKIG---LRIVQNGDIVLKKLFVPDEDRIAELNSFQDTNKVLAAS--R 283
PG+T I K G + NG + + + +P + + ++ K + ++ R
Sbjct: 215 LPLPGITVGDIGMKFGNGAYNTMDNGVLRFEHVRIPRDQMLMRVSQVTREGKYVQSNVPR 274
Query: 284 VMVCWQPIGVSMGIYD-----------MCHRYLKERKQFG-------APLAAFQINQQKL 325
+V + V I + RY R+QFG + + ++ Q +L
Sbjct: 275 QLVYGTMVYVRQTIVSDASTAMSRAVCIAARYSAVRRQFGGNNGSLESQVIDYKTQQARL 334
Query: 326 VQMLGNVQAMVLVGWRLCKLY----------------ESGKLTPGHASLGKSWISLRARE 369
+L + A VG L LY E+ T G SL S S E
Sbjct: 335 FPLLASAYAFRFVGEWLKWLYTDVMKRLQANDFSTLPEAHACTAGLKSLTTSATSDGIEE 394
Query: 370 TAALGRELLGGNGILADYLVAKAFCDLEPIYTFEG 404
R+L GG+G L + + F P T+EG
Sbjct: 395 C----RKLCGGHGYLCSSGLPELFAVYVPTCTYEG 425
>Medtr4g100640.2 | peroxisomal acyl-coenzyme A oxidase-like protein
| HC | chr4:41511892-41519080 | 20130731
Length = 534
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 137/335 (40%), Gaps = 67/335 (20%)
Query: 130 FILVHSCLAMLTIALCGSEAQKQKYLPSLAELKTISCWALTEPDYGSDASSLKTTAT--- 186
F +H + + I G+E Q+QK+LP ++ I C+A TE +GS+ L+TTAT
Sbjct: 98 FTDLHWGMFIPAIKGQGTEEQQQKWLPLAQRMQIIGCYAQTELGHGSNVQGLETTATFDP 157
Query: 187 KVEGGWI----LEGQKRWIGN----STFADLLVIFARNTTTNQ---INGYIVKKDA---- 231
K + I L K W G ST A V++AR T + ++G+IV+ +
Sbjct: 158 KTDEFVIHSPTLTSSKWWPGGLGKVSTHA---VVYARLITDGRDHGVHGFIVQLRSLDDH 214
Query: 232 ---PGLTATKIENKIG---LRIVQNGDIVLKKLFVPDEDRIAELNSFQDTNKVLAAS--R 283
PG+T I K G + NG + + + +P + + ++ K + ++ R
Sbjct: 215 LPLPGITVGDIGMKFGNGAYNTMDNGVLRFEHVRIPRDQMLMRVSQVTREGKYVQSNVPR 274
Query: 284 VMVCWQPIGVSMGIYD-----------MCHRYLKERKQFG-------APLAAFQINQQKL 325
+V + V I + RY R+QFG + + ++ Q +L
Sbjct: 275 QLVYGTMVYVRQTIVSDASTAMSRAVCIAARYSAVRRQFGGNNGSLESQVIDYKTQQARL 334
Query: 326 VQMLGNVQAMVLVGWRLCKLY----------------ESGKLTPGHASLGKSWISLRARE 369
+L + A VG L LY E+ T G SL S S E
Sbjct: 335 FPLLASAYAFRFVGEWLKWLYTDVMKRLQANDFSTLPEAHACTAGLKSLTTSATSDGIEE 394
Query: 370 TAALGRELLGGNGILADYLVAKAFCDLEPIYTFEG 404
R+L GG+G L + + F P T+EG
Sbjct: 395 C----RKLCGGHGYLCSSGLPELFAVYVPTCTYEG 425
>Medtr5g012920.1 | peroxisomal acyl-coenzyme A oxidase-like protein
| HC | chr5:4011592-4004454 | 20130731
Length = 664
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 135/335 (40%), Gaps = 67/335 (20%)
Query: 130 FILVHSCLAMLTIALCGSEAQKQKYLPSLAELKTISCWALTEPDYGSDASSLKTTAT--- 186
F +H + + I G++ Q++K+LP +++ I C+A TE +GS+ L+TTAT
Sbjct: 98 FTDLHWGMFVPAIKGQGTDEQQEKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDP 157
Query: 187 KVEGGWI----LEGQKRWIGN----STFADLLVIFARNTTTNQ---INGYIVKKDA---- 231
K + I L K W G ST A +++AR T Q ++G+IV+ +
Sbjct: 158 KTDEFIIHSPTLTSSKWWPGGLGKISTHA---IVYARLITEGQDQGVHGFIVQLRSLDDH 214
Query: 232 ---PGLTATKIENKIG---LRIVQNGDIVLKKLFVPDEDRIAELNSFQDTNKVLAAS--R 283
PG+T I K G + NG + + +P + ++ K + ++ R
Sbjct: 215 LPLPGITVGDIGMKFGNAAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPR 274
Query: 284 VMVCWQPIGVSMGIYD-----------MCHRYLKERKQFGA-------PLAAFQINQQKL 325
++ + V I + RY R+QFG+ + ++ Q +L
Sbjct: 275 QLIYGTMVYVRQAIVADASTALSRAVCIATRYSAVRRQFGSQKGGPETQVIDYKTQQARL 334
Query: 326 VQMLGNVQAMVLVGWRLCKLY----------------ESGKLTPGHASLGKSWISLRARE 369
+L + A V L LY E+ T G SL S + E
Sbjct: 335 FPLLASAYAFRFVSEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTSATADGIEE 394
Query: 370 TAALGRELLGGNGILADYLVAKAFCDLEPIYTFEG 404
R+L GG+G L + + F P T+EG
Sbjct: 395 C----RKLCGGHGYLCSSGLPELFAVYVPACTYEG 425