Miyakogusa Predicted Gene

Lj1g3v2326690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2326690.1 Non Characterized Hit- tr|I1K838|I1K838_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37519
PE,27.63,3e-18,seg,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; zf-C3HC4_3,NULL; UNCHARACTERIZED RING
ZINC,CUFF.28901.1
         (455 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g068580.1 | ubiquitin-protein ligase, putative | HC | chr7...   535   e-152
Medtr3g463920.1 | ubiquitin-protein ligase, putative | HC | chr3...   206   3e-53
Medtr1g018650.1 | ubiquitin-protein ligase, putative | HC | chr1...   116   6e-26
Medtr1g476030.1 | E3 ubiquitin-protein ligase XBAT35, putative |...    57   3e-08
Medtr1g476030.2 | E3 ubiquitin-protein ligase XBAT35, putative |...    56   6e-08
Medtr1g089900.1 | E3 ubiquitin ligase-like protein | HC | chr1:4...    52   2e-06

>Medtr7g068580.1 | ubiquitin-protein ligase, putative | HC |
           chr7:25129211-25135611 | 20130731
          Length = 447

 Score =  535 bits (1378), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 267/425 (62%), Positives = 317/425 (74%), Gaps = 2/425 (0%)

Query: 31  ENGSRDGLRSPESRRVNITFGRSRWSLGADSAVNRDDRWSCFAVIFSFWFFVSVTLILGV 90
           EN      R  ES RV+I +GR    +   SA+ RDD  SC AV F FWFFV+V +++GV
Sbjct: 25  ENAQVSPNRPRESPRVSIIYGRFARRINGHSAIARDDNCSCLAVTFCFWFFVAVIMVMGV 84

Query: 91  YGSMIVVLGPESSIAFQPSPVFVQYVKVENLDAKPGPILYGTYQYPPLDVVTTWGETRNV 150
           YGSM VVLGP SS+  QP+P+FVQYVKVENL A PG ILYGT+Q PPLDVV+TW ET N+
Sbjct: 85  YGSMSVVLGPCSSLILQPNPMFVQYVKVENLKANPGLILYGTHQDPPLDVVSTWSETHNM 144

Query: 151 SLPSGSHKEWRYYLNRGSQVNISYRLIPESSSIFLIIADGTEGLSVWLENPTHPNTTLSW 210
           S+P GS KEW+YYLNRGS+VNISY L  E+SS++L+IA+G + LS+WL++ T+PNTTLSW
Sbjct: 145 SIPYGSVKEWKYYLNRGSEVNISYSLSSENSSLYLVIAEGAQSLSLWLQDLTYPNTTLSW 204

Query: 211 NIIQGTGMITQEIFSSTSYYVAXXXXXXXXXXXXXXSVRAFVHNTTNAYYKCALTSSPCS 270
           N+I+GTG+ITQ+IF S+SYYVA              +VRAF+HNTT AYYKCALT SPCS
Sbjct: 205 NVIRGTGVITQKIFRSSSYYVALGNLEEEVKVELNLTVRAFLHNTTKAYYKCALTGSPCS 264

Query: 271 LNIFFPNGNAAVLVSPAPQQNTSNNEWYVKLSYGPRWMTYXXXXXXXXXXXXXXXNYLNK 330
           +NIFFP+G+ AVLVSPAPQQNTSN+EWYVKL+YGPRW+TY               N+ NK
Sbjct: 265 MNIFFPHGSTAVLVSPAPQQNTSNDEWYVKLTYGPRWLTYIIGIGILTLIMFWAFNFFNK 324

Query: 331 LHCAHEDRAGVGSEGNGPQREPLLSRKXXXXXXXXXXXXXXXXXEEDLDFHIGGSVDGKL 390
           L C+H+DR G  SEG GP R P LSRK                 +EDL+F  GGS DGK+
Sbjct: 325 LQCSHDDRVGSRSEGTGPDRAPFLSRK--DDLSRGSSYDSLPEDDEDLNFVAGGSTDGKI 382

Query: 391 LVDGETSNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRIAEASGTCPVCRRNMKKVR 450
           L DGETSNNT+RLCAICFDAPRDCFFLPCGHC ACF CG+RIAEA+G CPVCRRNMKKVR
Sbjct: 383 LGDGETSNNTQRLCAICFDAPRDCFFLPCGHCVACFACGSRIAEAAGICPVCRRNMKKVR 442

Query: 451 KIFTV 455
           +IFTV
Sbjct: 443 RIFTV 447


>Medtr3g463920.1 | ubiquitin-protein ligase, putative | HC |
           chr3:25649684-25653834 | 20130731
          Length = 387

 Score =  206 bits (525), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/391 (34%), Positives = 193/391 (49%), Gaps = 20/391 (5%)

Query: 21  DASTSGENAAENGSRDGLRSPESRRVNITFGRSRWSLGADSAVNRDDRWSCFAVIFSFWF 80
            AS   ++   N ++    +    RVNI+   S  +   D      D WSC  V+  FW 
Sbjct: 10  QASEEAKHEDSNENQQEQLNTNPYRVNISITNSFMNFMLD------DIWSCIVVLVVFWL 63

Query: 81  FVSVTLILGVYGSMIVVLGPESSIAFQPSPVFVQYVKVE-NLDAKPGPILYGTYQYPPLD 139
             SVTL++GV+GS+ + LGP SS   + + V +Q +KVE N   KPG +LYG    PPLD
Sbjct: 64  IASVTLVVGVHGSVNLQLGPYSSSLIEINSVLIQSIKVEQNNKPKPGLMLYGFDLPPPLD 123

Query: 140 VVTTWGETRNVSLPSGSHKEWRYYLNRGSQVNISYRLIPESSSIFLIIADGTEGLSVWLE 199
           V   W E  + ++P+ S +EW +YLN+GSQ+N+ Y +    + +FL+IA G E L  W E
Sbjct: 124 VKINWTEMYDANIPAKSQEEWIFYLNKGSQLNVFYNVKSLVAPLFLVIAKGRESLIKWKE 183

Query: 200 NPTHPNTTLSWNIIQGTGMITQEIFSSTSYYVAXXXXX-XXXXXXXXXSVRAFVHNTTNA 258
           +P  PN TL WN I G+G I+Q+I  S++YYVA                V A ++NTT +
Sbjct: 184 DPLFPNATLYWNNIYGSGSISQKISYSSTYYVAIGNMKPQNVKVELKFIVNALLYNTTGS 243

Query: 259 YYKCALTSSPCSLNIFFPNGNAAVLVSPAPQQNTSNNEWY-VKLSYGPRWMTYXXXXXXX 317
           Y KC+L +  C LN    + N A+L +P P +  S NEW+ V +SY PRW+ Y       
Sbjct: 244 YKKCSLDNGLCRLNPAL-SANIALLTTPGPIEGASKNEWFDVNVSYEPRWIIYFAGLGVL 302

Query: 318 XXXXXXXXNYLNKLHCAHEDRAGVGSEGNGPQREPLLSRKXXXXXXXXXXXXXXXXXEED 377
                    +       +E+ A         +R PLLSRK                    
Sbjct: 303 IVQILSSIKFYKTFLTNNEENARFEQVEVISERAPLLSRKDSDNSSWCSSYN-------- 354

Query: 378 LDFHIGGSVDGKLLVDGETSNNTRRLCAICF 408
             F    S +GK +++GET    ++L  + F
Sbjct: 355 -SFSSENSDEGKSIIEGETK-LLKKLAVVPF 383


>Medtr1g018650.1 | ubiquitin-protein ligase, putative | HC |
           chr1:5422995-5420514 | 20130731
          Length = 401

 Score =  116 bits (290), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 165/423 (39%), Gaps = 67/423 (15%)

Query: 52  RSRWSLGADSAVNRDDRWSCFAVIFSFWFFVSVTLILGVYGSMIVVLGPESSIAFQPSPV 111
           +S++S+G        D  + F   F+ + F S +++ G YG   ++LGP SS   Q    
Sbjct: 25  QSQYSIGWQ------DTMAFFIATFTIYLF-STSILYGFYGDARLILGPSSSRLIQSRSF 77

Query: 112 FVQYVKVEN--LDAKPGPILYGTYQYPPLDVVTTWGETRNVSLPSGSHKEWRYYLNRGSQ 169
           FV  ++V N   +A     LY   + P L+    W  ++ + + + S K    +LN GS 
Sbjct: 78  FVDQIEVTNEYTNANNDIHLYAFNEKPELNSEINWTTSKFLVVEAYSRKGISLWLNEGS- 136

Query: 170 VNISYRLIPESSSIFLIIADGTEGLSVWLEN---PTHPNTTLSWNIIQGTGMITQEIFSS 226
             I  R   E+SS+     +  EG+ +  E       PN           G   + I   
Sbjct: 137 -TICLRWEAEASSL-----NKLEGIVIKGEKRFEKLEPNN----------GKRAEYIVEE 180

Query: 227 TSYYVA--XXXXXXXXXXXXXXSVRAFVHNTTNAYYKCALTSSPCSLNIFFPNGNAAVLV 284
              Y                  +V A +++TT A  KC+  +  C L++FFP     VL 
Sbjct: 181 DDRYQIGILNMNARNIILTLHINVSAKIYDTTKATNKCSTRNGSCKLDLFFPITYYLVLT 240

Query: 285 SPAPQQNTSNNEWYVKLSYGPRWMTYXXXXXXXXXXXXXXXNYLNKLHCAHEDRAGVGSE 344
           +P    N  ++ W+V++S+  R  +Y                 L  L   + +   V   
Sbjct: 241 APK-NGNDDDDAWFVEISFMARVFSYIILLGVFMIVIFMI---LKCLGADYGEIHNVAEA 296

Query: 345 GNGPQREPLLSRKXXXXXXXXXXXXXXXXXEEDLDFHIGGSVDGKLLVDGETSNNTRRLC 404
               + EPL+                         FH     +     D        +LC
Sbjct: 297 QEVTETEPLMQPNPVTYGTNI--------------FHEKEETNS----DVSEELYDEKLC 338

Query: 405 AICFDAPRDCFFLPCGHCAACFPCGTRIAE--------------ASGTCPVCRRNMKKVR 450
            ICFD  R+CFF+PCGHCA C+ C  RI +               S  CPVCRR + KV+
Sbjct: 339 IICFDEQRNCFFVPCGHCATCYDCAQRIMDEESNSTLTDQIANPKSKVCPVCRRVINKVK 398

Query: 451 KIF 453
           ++F
Sbjct: 399 RLF 401


>Medtr1g476030.1 | E3 ubiquitin-protein ligase XBAT35, putative | HC
           | chr1:33694006-33687085 | 20130731
          Length = 459

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 393 DGETSNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRIAEASGTCPVCRRNMKKVRKI 452
           +G+T+  +   C IC DAP +   +PCGH A C  C   +      CPVCR  + ++ K+
Sbjct: 397 EGKTAGGSGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQIIKL 456

Query: 453 FTV 455
           + V
Sbjct: 457 YHV 459


>Medtr1g476030.2 | E3 ubiquitin-protein ligase XBAT35, putative | HC
           | chr1:33693222-33687139 | 20130731
          Length = 392

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 393 DGETSNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRIAEASGTCPVCRRNMKKVRKI 452
           +G+T+  +   C IC DAP +   +PCGH A C  C   +      CPVCR  + ++ K+
Sbjct: 330 EGKTAGGSGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQIIKL 389

Query: 453 FTV 455
           + V
Sbjct: 390 YHV 392


>Medtr1g089900.1 | E3 ubiquitin ligase-like protein | HC |
           chr1:40259713-40254728 | 20130731
          Length = 341

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 383 GGSVDGKLLVDGETSNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRIAEASGTCPVC 442
           GG +D  L    +       LC IC +   +  F+PCGH   C  C + +     +CP+C
Sbjct: 273 GGEMDDSLSDGAKRERAMPNLCVICLEQEYNSVFVPCGHMCCCTACSSHLT----SCPLC 328

Query: 443 RRNMKKVRKIF 453
           RR ++K  K F
Sbjct: 329 RRQIEKAVKTF 339