Miyakogusa Predicted Gene
- Lj1g3v2315340.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2315340.2 Non Characterized Hit- tr|I3SVG3|I3SVG3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.11,0,sigpep_I_bact: signal peptidase I,Peptidase S26A, signal
peptidase I; LEADERPTASE,Peptidase S26A, si,CUFF.28916.2
(173 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g007850.1 | inner membrane protease subunit, putative | HC... 261 2e-70
Medtr8g039990.2 | inner membrane protease subunit 1 | HC | chr8:... 92 2e-19
Medtr8g039990.1 | inner membrane protease subunit 1 | HC | chr8:... 89 2e-18
Medtr2g072450.1 | inner membrane protease subunit 1 | HC | chr2:... 89 3e-18
Medtr8g039980.2 | inner membrane protease subunit-like protein |... 72 3e-13
Medtr8g039980.3 | inner membrane protease subunit-like protein |... 72 3e-13
Medtr8g039980.1 | inner membrane protease subunit-like protein |... 72 3e-13
Medtr8g040043.1 | S26 family signal peptidase | LC | chr8:148937... 61 5e-10
Medtr2g059220.1 | processing peptidase | HC | chr2:24452161-2445... 57 1e-08
Medtr3g100960.1 | processing peptidase | HC | chr3:46459060-4646... 56 2e-08
Medtr8g103470.1 | signal peptidase I family protein | HC | chr8:... 54 5e-08
Medtr1g069900.1 | peptidase S24/S26A/S26B/S26C family protein | ... 52 4e-07
Medtr3g088435.1 | signal peptidase I family protein | HC | chr3:... 48 4e-06
>Medtr5g007850.1 | inner membrane protease subunit, putative | HC |
chr5:1550310-1553374 | 20130731
Length = 166
Score = 261 bits (667), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/169 (73%), Positives = 137/169 (81%), Gaps = 4/169 (2%)
Query: 1 MGPSGFLWNFTKKFVTFGLISVTVSDRYMTVVPVRGGSMSPTFNPKTHSLMGGVSDDYVF 60
MG +WN TKK T GLI+ TVSDRY TVVPVRG SMSPTFNPKT+S +DDYVF
Sbjct: 2 MGTRNLVWNVTKKLATIGLITFTVSDRYATVVPVRGASMSPTFNPKTNSF----TDDYVF 57
Query: 61 VEKFCLQKYKFSHGDVVVFRSPLNHKETHIKRIIALPGEWIGAHHNYDVLKIPEGHCWVE 120
VEK CL K+KFSHGD+V+F SP N KETHIKRIIALPGEW HN DVLK+PEGHCWVE
Sbjct: 58 VEKLCLDKFKFSHGDIVIFSSPSNFKETHIKRIIALPGEWFVNRHNQDVLKVPEGHCWVE 117
Query: 121 GDNAASSLDSKSFGPIPLALIRGRVTHVVWPPQRIGAVKSTPPEGLSPS 169
GDNAASS DSKS+GP+PL L+RGRVTHVVWPPQRIGAVK+T PE L S
Sbjct: 118 GDNAASSTDSKSYGPVPLGLVRGRVTHVVWPPQRIGAVKNTTPERLPSS 166
>Medtr8g039990.2 | inner membrane protease subunit 1 | HC |
chr8:14870537-14872981 | 20130731
Length = 162
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 16/151 (10%)
Query: 14 FVTFGLISVTVSDRYM-TVVPVRGGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFS 72
FV + V++ Y+ T+V G SM PT + + E+ + K +
Sbjct: 17 FVVKAYCVLHVTENYLITLVKTEGASMLPTIDSTPSMFLA---------ERISPRFGKVA 67
Query: 73 HGDVVVFRSPLNHKETHIKRIIALPGEWI------GAHHNYDVLKIPEGHCWVEGDNAAS 126
HGD+V RSP N +E++ KR+I L G+ I G + ++ + +P+GH WVEGDN S
Sbjct: 68 HGDIVRLRSPQNPRESYGKRVIGLEGDSITYIADRGNGYKHETVVVPKGHVWVEGDNKFS 127
Query: 127 SLDSKSFGPIPLALIRGRVTHVVWPPQRIGA 157
S DS+SFGP+P LI ++ VWP + G+
Sbjct: 128 SYDSRSFGPVPYGLIESKIFWRVWPRKDFGS 158
>Medtr8g039990.1 | inner membrane protease subunit 1 | HC |
chr8:14871855-14874667 | 20130731
Length = 201
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 14 FVTFGLISVTVSDRYM-TVVPVRGGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFS 72
FV + V++ Y+ T+V G SM PT + + E+ + K +
Sbjct: 17 FVVKAYCVLHVTENYLITLVKTEGASMLPTIDSTPSMFLA---------ERISPRFGKVA 67
Query: 73 HGDVVVFRSPLNHKETHIKRIIALPGEWI------GAHHNYDVLKIPEGHCWVEGDNAAS 126
HGD+V RSP N +E++ KR+I L G+ I G + ++ + +P+GH WVEGDN S
Sbjct: 68 HGDIVRLRSPQNPRESYGKRVIGLEGDSITYIADRGNGYKHETVVVPKGHVWVEGDNKFS 127
Query: 127 SLDSKSFGPIPLALIRGRVTHVVWPPQRIGAVKSTPPEGLSPSIVGS 173
S DS+SFGP+P LI ++ V R+ + + L PSI+ +
Sbjct: 128 SYDSRSFGPVPYGLIESKIFWRVSLYGRVKILDRSGINDLKPSIIKT 174
>Medtr2g072450.1 | inner membrane protease subunit 1 | HC |
chr2:30504106-30498450 | 20130731
Length = 166
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 14/130 (10%)
Query: 36 GGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVVVFRSPLNHKETHIKRIIA 95
G SM PT N ++ D V VE + K HGD+V+ +SPLN KR++A
Sbjct: 46 GPSMLPTLN---------IAGDVVLVEHVSPRIGKVGHGDLVLVKSPLNPNRNLTKRVVA 96
Query: 96 LPGEWIG-----AHHNYDVLKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHVVW 150
+ G+ + + + +P+GH W++GDN +S DS+ FGP+P LIRG+V VW
Sbjct: 97 MEGDTVTYFDPLNSEDSRIAVVPKGHVWIQGDNVYASRDSRHFGPVPYGLIRGKVFFRVW 156
Query: 151 PPQRIGAVKS 160
PP G + +
Sbjct: 157 PPSSFGRLDN 166
>Medtr8g039980.2 | inner membrane protease subunit-like protein | HC
| chr8:14866261-14869549 | 20130731
Length = 162
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 18/142 (12%)
Query: 24 VSDRYMTVVPVR--GGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVVVFRS 81
V+++Y+ + PV+ G SM PT + V+ E+ + K + GD+V+ RS
Sbjct: 27 VTNKYL-IDPVQTIGPSMLPTID---------VTPSLYLAERISPRFGKAAQGDIVILRS 76
Query: 82 PLNHKETHIKRIIALPGEWIG--AHHNYD----VLKIPEGHCWVEGDNAASSLDSKSFGP 135
P N + KR++ L G+ I A N D + +P+GH W+EGDN S DS++FGP
Sbjct: 77 PRNPRMCITKRLVGLEGDTITYVADPNKDDKQETVVVPKGHVWIEGDNKYKSNDSRNFGP 136
Query: 136 IPLALIRGRVTHVVWPPQRIGA 157
+P LI R+ V P + G+
Sbjct: 137 VPYGLIESRLFWKVSPLKDFGS 158
>Medtr8g039980.3 | inner membrane protease subunit-like protein | HC
| chr8:14866261-14869549 | 20130731
Length = 162
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 18/142 (12%)
Query: 24 VSDRYMTVVPVR--GGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVVVFRS 81
V+++Y+ + PV+ G SM PT + V+ E+ + K + GD+V+ RS
Sbjct: 27 VTNKYL-IDPVQTIGPSMLPTID---------VTPSLYLAERISPRFGKAAQGDIVILRS 76
Query: 82 PLNHKETHIKRIIALPGEWIG--AHHNYD----VLKIPEGHCWVEGDNAASSLDSKSFGP 135
P N + KR++ L G+ I A N D + +P+GH W+EGDN S DS++FGP
Sbjct: 77 PRNPRMCITKRLVGLEGDTITYVADPNKDDKQETVVVPKGHVWIEGDNKYKSNDSRNFGP 136
Query: 136 IPLALIRGRVTHVVWPPQRIGA 157
+P LI R+ V P + G+
Sbjct: 137 VPYGLIESRLFWKVSPLKDFGS 158
>Medtr8g039980.1 | inner membrane protease subunit-like protein | HC
| chr8:14867930-14869175 | 20130731
Length = 193
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 18/133 (13%)
Query: 24 VSDRYMTVVPVR--GGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVVVFRS 81
V+++Y+ + PV+ G SM PT + V+ E+ + K + GD+V+ RS
Sbjct: 27 VTNKYL-IDPVQTIGPSMLPTID---------VTPSLYLAERISPRFGKAAQGDIVILRS 76
Query: 82 PLNHKETHIKRIIALPGEWIG--AHHNYD----VLKIPEGHCWVEGDNAASSLDSKSFGP 135
P N + KR++ L G+ I A N D + +P+GH W+EGDN S DS++FGP
Sbjct: 77 PRNPRMCITKRLVGLEGDTITYVADPNKDDKQETVVVPKGHVWIEGDNKYKSNDSRNFGP 136
Query: 136 IPLALIRGRVTHV 148
+P LI R H+
Sbjct: 137 VPYGLIESRYLHL 149
>Medtr8g040043.1 | S26 family signal peptidase | LC |
chr8:14893796-14895624 | 20130731
Length = 122
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 81 SPLNHKETHIKRII--ALPGEWIGAHHN------YDVL---KIPEGHCWVEGDNAASSLD 129
S +N +E I L G+ + + N D+L +P+GH WVEGDN +S D
Sbjct: 31 SRMNEREDSGSAIFRPMLQGDLLDSSQNPCRCTFLDLLFMSSVPKGHVWVEGDNKLNSYD 90
Query: 130 SKSFGPIPLALIRGRVTHVVWPPQRIGAVKS 160
S+SFGPIP L++ ++ +VWP + G++++
Sbjct: 91 SRSFGPIPYGLLKSKIFWMVWPCKDFGSLRN 121
>Medtr2g059220.1 | processing peptidase | HC |
chr2:24452161-24453195 | 20130731
Length = 344
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 28/126 (22%)
Query: 57 DYVFVEKFCLQKYKFSHGDVVVFRSPLNHKE-------THIKRIIALPG----------- 98
D V EKF L K D+V+F+ P KE IKRI+A G
Sbjct: 204 DRVLTEKFSLFFRKPHVSDIVIFKPPQFLKEFGYSSSDVFIKRIVAKAGDVVQVKGGKLL 263
Query: 99 --------EWIGAHHNYDV--LKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHV 148
E++ +Y++ + +P GH +V GDN S DS ++GP+P+ I GR
Sbjct: 264 VNGVAEQEEFVLEPLDYELAPMVVPAGHVFVMGDNRNQSFDSHNWGPLPIKNIVGRSMFR 323
Query: 149 VWPPQR 154
WPP +
Sbjct: 324 YWPPSK 329
>Medtr3g100960.1 | processing peptidase | HC |
chr3:46459060-46461865 | 20130731
Length = 375
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 28/127 (22%)
Query: 57 DYVFVEKFCLQKYKFSHGDVVVFRSP-------LNHKETHIKRIIALPGEWIG------- 102
D V EKF K D+V+F++P + + IKR++A G+ +
Sbjct: 230 DRVLTEKFSFFFRKPDVSDIVIFKAPSWLKAYGFSSSDVFIKRVVAKAGDVVEVRDGKLL 289
Query: 103 ----AHHNYDVLK----------IPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHV 148
A VL+ +P+GH +V GDN S DS ++GP+P+ I GR
Sbjct: 290 VNGVAEDEEFVLEPLAYELAPMVVPKGHVFVMGDNRNKSFDSHNWGPLPIENIVGRSMFR 349
Query: 149 VWPPQRI 155
WPP ++
Sbjct: 350 YWPPSKV 356
>Medtr8g103470.1 | signal peptidase I family protein | HC |
chr8:43535731-43531875 | 20130731
Length = 292
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 42/189 (22%)
Query: 2 GPSGFLWNFTKK--FVTFGLISVTVSDRYMTVVP--VRGGSMSPTFNPKTHSLMGGVSDD 57
GP NFT F ++++++ R P + SM PT++ +G D
Sbjct: 92 GPFPDWLNFTSDDAKTVFAALAISLAFRTFIAEPRFIPSLSMYPTYD------VG----D 141
Query: 58 YVFVEKFCLQKYKFSHGDVVVFRSP-------LNHKETHIKRIIALPGE----------- 99
+ EK K D+V+F+SP + IKR++A G+
Sbjct: 142 RIVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVRNGHLIV 201
Query: 100 --------WIGAHHNYDV--LKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHVV 149
+I Y++ ++PE +V GDN +S DS +GP+P I GR
Sbjct: 202 NGVERDEKFINEQPKYEMKPTRVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVLRY 261
Query: 150 WPPQRIGAV 158
WPP RI A
Sbjct: 262 WPPNRIAAT 270
>Medtr1g069900.1 | peptidase S24/S26A/S26B/S26C family protein | HC
| chr1:30577405-30573965 | 20130731
Length = 205
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 35 RGGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSH-GDVVVFRSPLNHKETHIKRI 93
+G M+PT + K +L+ V + + K + GDVVV ++P + ++R+
Sbjct: 56 KGEEMAPTIDAKGATLL---------VRRLPIPDQKRVYVGDVVVLKNPEKPDDYLVRRL 106
Query: 94 IALPG-EWIGAHHNYDVLKIPEGHCWVEGDN----AASSLDSKSFGPIPLALIRGRVTHV 148
A G E + + + CWV +N A ++DS++FGPI + I GRV +
Sbjct: 107 AATEGYEMASTDEKDESFVLEKDQCWVVAENEKLKAKEAIDSRTFGPIHMTNIVGRVLYC 166
Query: 149 VWPPQRIGAVKSTP 162
+ G V+++P
Sbjct: 167 LRNAVDHGRVQNSP 180
>Medtr3g088435.1 | signal peptidase I family protein | HC |
chr3:40185847-40190700 | 20130731
Length = 193
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 26/114 (22%)
Query: 57 DYVFVEKFCLQKYKFSHGDVVVFRSPLNHKETH-----IKRIIALPGEWIGAHH------ 105
D + +EK S D++ FR P H + IKR++A G+ + HH
Sbjct: 70 DRIIIEKASYYIRSPSIHDIITFRDPTQHSGDNTDVIFIKRVVAKEGDTVEVHHGGLYVN 129
Query: 106 ------NYDVLK---------IPEGHCWVEGDNAASSLDSKSFGPIPLALIRGR 144
++ V K +P+GH +V GDN +S DS +GP+P+ I GR
Sbjct: 130 GVAQEEDFVVEKPTYTTKLTYVPKGHVYVLGDNRNNSYDSHIWGPLPMKNIVGR 183