Miyakogusa Predicted Gene

Lj1g3v2315340.2
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2315340.2 Non Characterized Hit- tr|I3SVG3|I3SVG3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.11,0,sigpep_I_bact: signal peptidase I,Peptidase S26A, signal
peptidase I; LEADERPTASE,Peptidase S26A, si,CUFF.28916.2
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g007850.1 | inner membrane protease subunit, putative | HC...   261   2e-70
Medtr8g039990.2 | inner membrane protease subunit 1 | HC | chr8:...    92   2e-19
Medtr8g039990.1 | inner membrane protease subunit 1 | HC | chr8:...    89   2e-18
Medtr2g072450.1 | inner membrane protease subunit 1 | HC | chr2:...    89   3e-18
Medtr8g039980.2 | inner membrane protease subunit-like protein |...    72   3e-13
Medtr8g039980.3 | inner membrane protease subunit-like protein |...    72   3e-13
Medtr8g039980.1 | inner membrane protease subunit-like protein |...    72   3e-13
Medtr8g040043.1 | S26 family signal peptidase | LC | chr8:148937...    61   5e-10
Medtr2g059220.1 | processing peptidase | HC | chr2:24452161-2445...    57   1e-08
Medtr3g100960.1 | processing peptidase | HC | chr3:46459060-4646...    56   2e-08
Medtr8g103470.1 | signal peptidase I family protein | HC | chr8:...    54   5e-08
Medtr1g069900.1 | peptidase S24/S26A/S26B/S26C family protein | ...    52   4e-07
Medtr3g088435.1 | signal peptidase I family protein | HC | chr3:...    48   4e-06

>Medtr5g007850.1 | inner membrane protease subunit, putative | HC |
           chr5:1550310-1553374 | 20130731
          Length = 166

 Score =  261 bits (667), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 125/169 (73%), Positives = 137/169 (81%), Gaps = 4/169 (2%)

Query: 1   MGPSGFLWNFTKKFVTFGLISVTVSDRYMTVVPVRGGSMSPTFNPKTHSLMGGVSDDYVF 60
           MG    +WN TKK  T GLI+ TVSDRY TVVPVRG SMSPTFNPKT+S     +DDYVF
Sbjct: 2   MGTRNLVWNVTKKLATIGLITFTVSDRYATVVPVRGASMSPTFNPKTNSF----TDDYVF 57

Query: 61  VEKFCLQKYKFSHGDVVVFRSPLNHKETHIKRIIALPGEWIGAHHNYDVLKIPEGHCWVE 120
           VEK CL K+KFSHGD+V+F SP N KETHIKRIIALPGEW    HN DVLK+PEGHCWVE
Sbjct: 58  VEKLCLDKFKFSHGDIVIFSSPSNFKETHIKRIIALPGEWFVNRHNQDVLKVPEGHCWVE 117

Query: 121 GDNAASSLDSKSFGPIPLALIRGRVTHVVWPPQRIGAVKSTPPEGLSPS 169
           GDNAASS DSKS+GP+PL L+RGRVTHVVWPPQRIGAVK+T PE L  S
Sbjct: 118 GDNAASSTDSKSYGPVPLGLVRGRVTHVVWPPQRIGAVKNTTPERLPSS 166


>Medtr8g039990.2 | inner membrane protease subunit 1 | HC |
           chr8:14870537-14872981 | 20130731
          Length = 162

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 16/151 (10%)

Query: 14  FVTFGLISVTVSDRYM-TVVPVRGGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFS 72
           FV      + V++ Y+ T+V   G SM PT +      +          E+   +  K +
Sbjct: 17  FVVKAYCVLHVTENYLITLVKTEGASMLPTIDSTPSMFLA---------ERISPRFGKVA 67

Query: 73  HGDVVVFRSPLNHKETHIKRIIALPGEWI------GAHHNYDVLKIPEGHCWVEGDNAAS 126
           HGD+V  RSP N +E++ KR+I L G+ I      G  + ++ + +P+GH WVEGDN  S
Sbjct: 68  HGDIVRLRSPQNPRESYGKRVIGLEGDSITYIADRGNGYKHETVVVPKGHVWVEGDNKFS 127

Query: 127 SLDSKSFGPIPLALIRGRVTHVVWPPQRIGA 157
           S DS+SFGP+P  LI  ++   VWP +  G+
Sbjct: 128 SYDSRSFGPVPYGLIESKIFWRVWPRKDFGS 158


>Medtr8g039990.1 | inner membrane protease subunit 1 | HC |
           chr8:14871855-14874667 | 20130731
          Length = 201

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 16/167 (9%)

Query: 14  FVTFGLISVTVSDRYM-TVVPVRGGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFS 72
           FV      + V++ Y+ T+V   G SM PT +      +          E+   +  K +
Sbjct: 17  FVVKAYCVLHVTENYLITLVKTEGASMLPTIDSTPSMFLA---------ERISPRFGKVA 67

Query: 73  HGDVVVFRSPLNHKETHIKRIIALPGEWI------GAHHNYDVLKIPEGHCWVEGDNAAS 126
           HGD+V  RSP N +E++ KR+I L G+ I      G  + ++ + +P+GH WVEGDN  S
Sbjct: 68  HGDIVRLRSPQNPRESYGKRVIGLEGDSITYIADRGNGYKHETVVVPKGHVWVEGDNKFS 127

Query: 127 SLDSKSFGPIPLALIRGRVTHVVWPPQRIGAVKSTPPEGLSPSIVGS 173
           S DS+SFGP+P  LI  ++   V    R+  +  +    L PSI+ +
Sbjct: 128 SYDSRSFGPVPYGLIESKIFWRVSLYGRVKILDRSGINDLKPSIIKT 174


>Medtr2g072450.1 | inner membrane protease subunit 1 | HC |
           chr2:30504106-30498450 | 20130731
          Length = 166

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 14/130 (10%)

Query: 36  GGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVVVFRSPLNHKETHIKRIIA 95
           G SM PT N         ++ D V VE    +  K  HGD+V+ +SPLN      KR++A
Sbjct: 46  GPSMLPTLN---------IAGDVVLVEHVSPRIGKVGHGDLVLVKSPLNPNRNLTKRVVA 96

Query: 96  LPGEWIG-----AHHNYDVLKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHVVW 150
           + G+ +         +  +  +P+GH W++GDN  +S DS+ FGP+P  LIRG+V   VW
Sbjct: 97  MEGDTVTYFDPLNSEDSRIAVVPKGHVWIQGDNVYASRDSRHFGPVPYGLIRGKVFFRVW 156

Query: 151 PPQRIGAVKS 160
           PP   G + +
Sbjct: 157 PPSSFGRLDN 166


>Medtr8g039980.2 | inner membrane protease subunit-like protein | HC
           | chr8:14866261-14869549 | 20130731
          Length = 162

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 18/142 (12%)

Query: 24  VSDRYMTVVPVR--GGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVVVFRS 81
           V+++Y+ + PV+  G SM PT +         V+      E+   +  K + GD+V+ RS
Sbjct: 27  VTNKYL-IDPVQTIGPSMLPTID---------VTPSLYLAERISPRFGKAAQGDIVILRS 76

Query: 82  PLNHKETHIKRIIALPGEWIG--AHHNYD----VLKIPEGHCWVEGDNAASSLDSKSFGP 135
           P N +    KR++ L G+ I   A  N D     + +P+GH W+EGDN   S DS++FGP
Sbjct: 77  PRNPRMCITKRLVGLEGDTITYVADPNKDDKQETVVVPKGHVWIEGDNKYKSNDSRNFGP 136

Query: 136 IPLALIRGRVTHVVWPPQRIGA 157
           +P  LI  R+   V P +  G+
Sbjct: 137 VPYGLIESRLFWKVSPLKDFGS 158


>Medtr8g039980.3 | inner membrane protease subunit-like protein | HC
           | chr8:14866261-14869549 | 20130731
          Length = 162

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 18/142 (12%)

Query: 24  VSDRYMTVVPVR--GGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVVVFRS 81
           V+++Y+ + PV+  G SM PT +         V+      E+   +  K + GD+V+ RS
Sbjct: 27  VTNKYL-IDPVQTIGPSMLPTID---------VTPSLYLAERISPRFGKAAQGDIVILRS 76

Query: 82  PLNHKETHIKRIIALPGEWIG--AHHNYD----VLKIPEGHCWVEGDNAASSLDSKSFGP 135
           P N +    KR++ L G+ I   A  N D     + +P+GH W+EGDN   S DS++FGP
Sbjct: 77  PRNPRMCITKRLVGLEGDTITYVADPNKDDKQETVVVPKGHVWIEGDNKYKSNDSRNFGP 136

Query: 136 IPLALIRGRVTHVVWPPQRIGA 157
           +P  LI  R+   V P +  G+
Sbjct: 137 VPYGLIESRLFWKVSPLKDFGS 158


>Medtr8g039980.1 | inner membrane protease subunit-like protein | HC
           | chr8:14867930-14869175 | 20130731
          Length = 193

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 18/133 (13%)

Query: 24  VSDRYMTVVPVR--GGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVVVFRS 81
           V+++Y+ + PV+  G SM PT +         V+      E+   +  K + GD+V+ RS
Sbjct: 27  VTNKYL-IDPVQTIGPSMLPTID---------VTPSLYLAERISPRFGKAAQGDIVILRS 76

Query: 82  PLNHKETHIKRIIALPGEWIG--AHHNYD----VLKIPEGHCWVEGDNAASSLDSKSFGP 135
           P N +    KR++ L G+ I   A  N D     + +P+GH W+EGDN   S DS++FGP
Sbjct: 77  PRNPRMCITKRLVGLEGDTITYVADPNKDDKQETVVVPKGHVWIEGDNKYKSNDSRNFGP 136

Query: 136 IPLALIRGRVTHV 148
           +P  LI  R  H+
Sbjct: 137 VPYGLIESRYLHL 149


>Medtr8g040043.1 | S26 family signal peptidase | LC |
           chr8:14893796-14895624 | 20130731
          Length = 122

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 11/91 (12%)

Query: 81  SPLNHKETHIKRII--ALPGEWIGAHHN------YDVL---KIPEGHCWVEGDNAASSLD 129
           S +N +E     I    L G+ + +  N       D+L    +P+GH WVEGDN  +S D
Sbjct: 31  SRMNEREDSGSAIFRPMLQGDLLDSSQNPCRCTFLDLLFMSSVPKGHVWVEGDNKLNSYD 90

Query: 130 SKSFGPIPLALIRGRVTHVVWPPQRIGAVKS 160
           S+SFGPIP  L++ ++  +VWP +  G++++
Sbjct: 91  SRSFGPIPYGLLKSKIFWMVWPCKDFGSLRN 121


>Medtr2g059220.1 | processing peptidase | HC |
           chr2:24452161-24453195 | 20130731
          Length = 344

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 28/126 (22%)

Query: 57  DYVFVEKFCLQKYKFSHGDVVVFRSPLNHKE-------THIKRIIALPG----------- 98
           D V  EKF L   K    D+V+F+ P   KE         IKRI+A  G           
Sbjct: 204 DRVLTEKFSLFFRKPHVSDIVIFKPPQFLKEFGYSSSDVFIKRIVAKAGDVVQVKGGKLL 263

Query: 99  --------EWIGAHHNYDV--LKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHV 148
                   E++    +Y++  + +P GH +V GDN   S DS ++GP+P+  I GR    
Sbjct: 264 VNGVAEQEEFVLEPLDYELAPMVVPAGHVFVMGDNRNQSFDSHNWGPLPIKNIVGRSMFR 323

Query: 149 VWPPQR 154
            WPP +
Sbjct: 324 YWPPSK 329


>Medtr3g100960.1 | processing peptidase | HC |
           chr3:46459060-46461865 | 20130731
          Length = 375

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 28/127 (22%)

Query: 57  DYVFVEKFCLQKYKFSHGDVVVFRSP-------LNHKETHIKRIIALPGEWIG------- 102
           D V  EKF     K    D+V+F++P        +  +  IKR++A  G+ +        
Sbjct: 230 DRVLTEKFSFFFRKPDVSDIVIFKAPSWLKAYGFSSSDVFIKRVVAKAGDVVEVRDGKLL 289

Query: 103 ----AHHNYDVLK----------IPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHV 148
               A     VL+          +P+GH +V GDN   S DS ++GP+P+  I GR    
Sbjct: 290 VNGVAEDEEFVLEPLAYELAPMVVPKGHVFVMGDNRNKSFDSHNWGPLPIENIVGRSMFR 349

Query: 149 VWPPQRI 155
            WPP ++
Sbjct: 350 YWPPSKV 356


>Medtr8g103470.1 | signal peptidase I family protein | HC |
           chr8:43535731-43531875 | 20130731
          Length = 292

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 42/189 (22%)

Query: 2   GPSGFLWNFTKK--FVTFGLISVTVSDRYMTVVP--VRGGSMSPTFNPKTHSLMGGVSDD 57
           GP     NFT       F  ++++++ R     P  +   SM PT++      +G    D
Sbjct: 92  GPFPDWLNFTSDDAKTVFAALAISLAFRTFIAEPRFIPSLSMYPTYD------VG----D 141

Query: 58  YVFVEKFCLQKYKFSHGDVVVFRSP-------LNHKETHIKRIIALPGE----------- 99
            +  EK      K    D+V+F+SP           +  IKR++A  G+           
Sbjct: 142 RIVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVRNGHLIV 201

Query: 100 --------WIGAHHNYDV--LKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHVV 149
                   +I     Y++   ++PE   +V GDN  +S DS  +GP+P   I GR     
Sbjct: 202 NGVERDEKFINEQPKYEMKPTRVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVLRY 261

Query: 150 WPPQRIGAV 158
           WPP RI A 
Sbjct: 262 WPPNRIAAT 270


>Medtr1g069900.1 | peptidase S24/S26A/S26B/S26C family protein | HC
           | chr1:30577405-30573965 | 20130731
          Length = 205

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 15/134 (11%)

Query: 35  RGGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSH-GDVVVFRSPLNHKETHIKRI 93
           +G  M+PT + K  +L+         V +  +   K  + GDVVV ++P    +  ++R+
Sbjct: 56  KGEEMAPTIDAKGATLL---------VRRLPIPDQKRVYVGDVVVLKNPEKPDDYLVRRL 106

Query: 94  IALPG-EWIGAHHNYDVLKIPEGHCWVEGDN----AASSLDSKSFGPIPLALIRGRVTHV 148
            A  G E        +   + +  CWV  +N    A  ++DS++FGPI +  I GRV + 
Sbjct: 107 AATEGYEMASTDEKDESFVLEKDQCWVVAENEKLKAKEAIDSRTFGPIHMTNIVGRVLYC 166

Query: 149 VWPPQRIGAVKSTP 162
           +      G V+++P
Sbjct: 167 LRNAVDHGRVQNSP 180


>Medtr3g088435.1 | signal peptidase I family protein | HC |
           chr3:40185847-40190700 | 20130731
          Length = 193

 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 26/114 (22%)

Query: 57  DYVFVEKFCLQKYKFSHGDVVVFRSPLNHKETH-----IKRIIALPGEWIGAHH------ 105
           D + +EK        S  D++ FR P  H   +     IKR++A  G+ +  HH      
Sbjct: 70  DRIIIEKASYYIRSPSIHDIITFRDPTQHSGDNTDVIFIKRVVAKEGDTVEVHHGGLYVN 129

Query: 106 ------NYDVLK---------IPEGHCWVEGDNAASSLDSKSFGPIPLALIRGR 144
                 ++ V K         +P+GH +V GDN  +S DS  +GP+P+  I GR
Sbjct: 130 GVAQEEDFVVEKPTYTTKLTYVPKGHVYVLGDNRNNSYDSHIWGPLPMKNIVGR 183