Miyakogusa Predicted Gene
- Lj1g3v2268410.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2268410.1 tr|Q8LCY3|Q8LCY3_ARATH At1g76185 OS=Arabidopsis
thaliana GN=At1g76185 PE=4 SV=1,84.06,2e-18,seg,NULL,CUFF.28769.1
(79 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g115080.1 | transmembrane protein, putative | HC | chr3:53... 74 4e-14
>Medtr3g115080.1 | transmembrane protein, putative | HC |
chr3:53772463-53774358 | 20130731
Length = 108
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 41/53 (77%)
Query: 11 RVDVVVFVIWELVILAFLVFSVVSLYFKHIQLAFXXXXXXXXXXXXMKITKQV 63
+VDVVVFVIWELVILAFLVFSVVSLYFKHIQLAF MKITKQV
Sbjct: 40 KVDVVVFVIWELVILAFLVFSVVSLYFKHIQLAFILVCITVLLLLCMKITKQV 92