Miyakogusa Predicted Gene

Lj1g3v2268410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2268410.1 tr|Q8LCY3|Q8LCY3_ARATH At1g76185 OS=Arabidopsis
thaliana GN=At1g76185 PE=4 SV=1,84.06,2e-18,seg,NULL,CUFF.28769.1
         (79 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g115080.1 | transmembrane protein, putative | HC | chr3:53...    74   4e-14

>Medtr3g115080.1 | transmembrane protein, putative | HC |
          chr3:53772463-53774358 | 20130731
          Length = 108

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/53 (75%), Positives = 41/53 (77%)

Query: 11 RVDVVVFVIWELVILAFLVFSVVSLYFKHIQLAFXXXXXXXXXXXXMKITKQV 63
          +VDVVVFVIWELVILAFLVFSVVSLYFKHIQLAF            MKITKQV
Sbjct: 40 KVDVVVFVIWELVILAFLVFSVVSLYFKHIQLAFILVCITVLLLLCMKITKQV 92