Miyakogusa Predicted Gene

Lj1g3v2268380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2268380.1 Non Characterized Hit- tr|K3Y058|K3Y058_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si007569,47.47,2e-16,seg,NULL; coiled-coil,NULL,CUFF.28761.1
         (113 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g115060.1 | hypothetical protein | HC | chr3:53763286-5376...   150   3e-37

>Medtr3g115060.1 | hypothetical protein | HC |
           chr3:53763286-53762500 | 20130731
          Length = 107

 Score =  150 bits (378), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 73/90 (81%), Positives = 80/90 (88%)

Query: 22  KRKLGFFANVIKRKDSFIQLFAMTGILLLSMRSLGQKYRIHGLEEDTHALREEHDSLNER 81
           K+KL FFAN +KRKDSFIQLFAMTGILLLSM+SLGQKYRIHGL+EDTH LREEHDSL +R
Sbjct: 18  KKKLTFFANAMKRKDSFIQLFAMTGILLLSMKSLGQKYRIHGLQEDTHDLREEHDSLTDR 77

Query: 82  MKNIKLGLRREASQDPTGLFASRLHALFDE 111
           MKNIK  L  EASQD TGLFASRL +LF+E
Sbjct: 78  MKNIKTSLLHEASQDSTGLFASRLRSLFNE 107