Miyakogusa Predicted Gene

Lj1g3v2267290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2267290.1 Non Characterized Hit- tr|I1KSN1|I1KSN1_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,80.56,0.00000000008,seg,NULL,gene.g32852.t1.1
         (94 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g030130.1 | class III homeodomain leucine zipper protein |...    62   1e-10
Medtr4g058970.1 | class III homeodomain leucine zipper protein |...    50   4e-07
Medtr2g094520.1 | class III homeodomain leucine zipper protein |...    48   2e-06

>Medtr2g030130.1 | class III homeodomain leucine zipper protein | HC
           | chr2:11288103-11282650 | 20130731
          Length = 836

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 3/49 (6%)

Query: 1   MAIAPSRVSTQMGPKPLPGSPEAVTLVRWICRSYRFDIQISDLNLFEIE 49
           MAIAPSR  TQ+GPK LPGSPEA  L RWI RSYR     +   LF +E
Sbjct: 667 MAIAPSRPGTQLGPKSLPGSPEAHALARWISRSYRMH---TGAELFRVE 712


>Medtr4g058970.1 | class III homeodomain leucine zipper protein | HC
           | chr4:21744620-21738548 | 20130731
          Length = 846

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 1   MAIAPSRVSTQMGPKPLPGSPEAVTLVRWICRSYRF 36
           MAI+PS ++  +G K  PGSPEAVTL +WIC+SY +
Sbjct: 678 MAISPSGINPAVGAKLSPGSPEAVTLAQWICQSYSY 713


>Medtr2g094520.1 | class III homeodomain leucine zipper protein | HC
           | chr2:40311798-40317320 | 20130731
          Length = 839

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/33 (60%), Positives = 26/33 (78%)

Query: 2   AIAPSRVSTQMGPKPLPGSPEAVTLVRWICRSY 34
           AI+PS V+T  G K  PG+PEA+TL +WIC+SY
Sbjct: 673 AISPSSVNTSGGAKLSPGTPEALTLAQWICQSY 705