Miyakogusa Predicted Gene

Lj1g3v2264840.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2264840.2 tr|Q04219|Q04219_ANTMA TNP2 (Fragment)
OS=Antirrhinum majus GN=TAM1 PE=4
SV=1,46.46,0,Transposase_21,Transposon, En/Spm-like;
Transpos_assoc,NULL; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZ,CUFF.28758.2
         (373 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g057120.1 | hypothetical protein | LC | chr8:18801883-1880...   116   3e-26

>Medtr8g057120.1 | hypothetical protein | LC |
           chr8:18801883-18803131 | 20130731
          Length = 272

 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 99/162 (61%), Gaps = 5/162 (3%)

Query: 104 LIHDAFEGFNQSMGNNISDGGDIESNLDENLTHTSRNQSHPEVEKFEQLMKDANEELYSG 163
           +I+DAF G ++   N      + E + DE++   S ++   E ++F +L +DA + LY G
Sbjct: 1   MINDAF-GVDRDQTNEEPIASNEEIDRDEDVI-PSVSEERNEAKEFYELTRDAEQPLYEG 58

Query: 164 CKKFSKLSFVLHLYHIKRLFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGL 223
           C ++S+LSF+L LYHIK L   +++S   +L LLKDA  E   +PSS YE KK + +LG+
Sbjct: 59  CTRYSRLSFLLKLYHIKCLCGLSDKSLTMILELLKDAF-EFASIPSSFYEAKKTITKLGM 117

Query: 224 KYEKIHACPNDCMLFRNELADKNVNKCIKCGASRWKNDEKKV 265
            Y KI ACPNDCML+  E  D+    C  C  S+WK+ E ++
Sbjct: 118 NYVKIPACPNDCMLYWGE--DEERETCKICNTSKWKSGENEI 157