Miyakogusa Predicted Gene

Lj1g3v2264760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2264760.1 tr|Q0IUK3|Q0IUK3_ORYSJ Os11g0151500 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os11g01515,36.72,2e-18,MFS general substrate transporter,Major
facilitator superfamily domain, general substrate
transporte,CUFF.28743.1
         (135 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g114810.1 | MFS transporter | HC | chr3:53598748-53604770 ...   248   1e-66
Medtr1g112980.1 | MFS transporter | HC | chr1:51252683-51260095 ...   176   7e-45
Medtr1g092880.1 | hippocampus abundant transcript-like protein |...    95   2e-20
Medtr1g092870.1 | hippocampus abundant transcript-like protein |...    92   1e-19
Medtr1g092880.2 | hippocampus abundant transcript-like protein |...    91   3e-19
Medtr1g112980.2 | MFS transporter | HC | chr1:51252687-51260095 ...    87   4e-18
Medtr1g092880.3 | hippocampus abundant transcript-like protein |...    67   5e-12
Medtr1g112980.3 | MFS transporter | HC | chr1:51252683-51260095 ...    66   1e-11

>Medtr3g114810.1 | MFS transporter | HC | chr3:53598748-53604770 |
           20130731
          Length = 434

 Score =  248 bits (633), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 119/135 (88%), Positives = 126/135 (93%)

Query: 1   MPVLVPILSEAKLLSIGLFFHCVHMFIYSIAWTSWVPYAAAMFSILFNFSQPCIRSIVSK 60
           MP+  P L EA+LLSIGLFFHCVHMFIYSIAW+SWVPYAAAMFSILF FSQPCIRSIVSK
Sbjct: 300 MPIFAPTLGEARLLSIGLFFHCVHMFIYSIAWSSWVPYAAAMFSILFVFSQPCIRSIVSK 359

Query: 61  QVGPHEQGRAQGCISGICSIAHIVSPLAFSPLTALFLSERAPFNFPGFSIMCIGFASMVS 120
           QV P EQGRAQGCISGICSIAHIVSPLAFSPLTALFLSE+APFNFPGFSIMCIG ASMVS
Sbjct: 360 QVDPREQGRAQGCISGICSIAHIVSPLAFSPLTALFLSEKAPFNFPGFSIMCIGIASMVS 419

Query: 121 FVQSIMLRVIPPVLS 135
           FVQS+MLRV+P +LS
Sbjct: 420 FVQSMMLRVVPSILS 434


>Medtr1g112980.1 | MFS transporter | HC | chr1:51252683-51260095 |
           20130731
          Length = 440

 Score =  176 bits (445), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 103/135 (76%)

Query: 1   MPVLVPILSEAKLLSIGLFFHCVHMFIYSIAWTSWVPYAAAMFSILFNFSQPCIRSIVSK 60
           MP+LVP + E KLL+ GLF  C+ M +YSI+W++WVPYA A FS+L    +P + SI SK
Sbjct: 293 MPILVPAVGEEKLLTTGLFVSCISMLMYSISWSAWVPYALAGFSVLGVLVRPSLTSIASK 352

Query: 61  QVGPHEQGRAQGCISGICSIAHIVSPLAFSPLTALFLSERAPFNFPGFSIMCIGFASMVS 120
           QVGP+EQG  QGC+SGI S A+I+SPL FSPLTALFLSE APFNFPGFS+MC+G   M +
Sbjct: 353 QVGPNEQGMVQGCLSGITSAANIISPLIFSPLTALFLSEDAPFNFPGFSLMCLGLTLMTA 412

Query: 121 FVQSIMLRVIPPVLS 135
           F  S+M+R  PP++ 
Sbjct: 413 FFLSLMIRAPPPIMG 427


>Medtr1g092880.1 | hippocampus abundant transcript-like protein | HC
           | chr1:41827460-41823758 | 20130731
          Length = 441

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 75/128 (58%)

Query: 1   MPVLVPILSEAKLLSIGLFFHCVHMFIYSIAWTSWVPYAAAMFSILFNFSQPCIRSIVSK 60
           +P+L P++ E  +L   L     + ++  +AW  WVPY +A F I++   +P   +I+S+
Sbjct: 293 LPILNPLVGEKVILCSALLASIAYAWLSGLAWAPWVPYLSASFGIIYVLVKPATYAIISR 352

Query: 61  QVGPHEQGRAQGCISGICSIAHIVSPLAFSPLTALFLSERAPFNFPGFSIMCIGFASMVS 120
                 QG+AQ  I+G  SI+ ++SP+  SPLT+LFLS  APF   GFSI+C     M+S
Sbjct: 353 ASSSTNQGKAQTFIAGAQSISDLLSPIVMSPLTSLFLSSDAPFECKGFSILCASVCMMIS 412

Query: 121 FVQSIMLR 128
            + + ML 
Sbjct: 413 LIFACMLN 420


>Medtr1g092870.1 | hippocampus abundant transcript-like protein | HC
           | chr1:41820864-41817442 | 20130731
          Length = 442

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 72/128 (56%)

Query: 1   MPVLVPILSEAKLLSIGLFFHCVHMFIYSIAWTSWVPYAAAMFSILFNFSQPCIRSIVSK 60
           +P+L P++ E  +L   L     + ++  +AW  WVPY    F I++   +P    I+SK
Sbjct: 293 LPILNPLVGEKVILCSALLASIAYAWLSGLAWAPWVPYLGGSFGIIYILEKPATYGIISK 352

Query: 61  QVGPHEQGRAQGCISGICSIAHIVSPLAFSPLTALFLSERAPFNFPGFSIMCIGFASMVS 120
                 QG+AQ  I+G  SI+ ++SP+  SPLT+LFLS  APF   GFSI+C     ++S
Sbjct: 353 ASSSTNQGKAQTFIAGANSISGLLSPIVMSPLTSLFLSSDAPFECKGFSIICASVCMIIS 412

Query: 121 FVQSIMLR 128
            + + ML 
Sbjct: 413 LIFACMLN 420


>Medtr1g092880.2 | hippocampus abundant transcript-like protein | HC
           | chr1:41827454-41823758 | 20130731
          Length = 436

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 1   MPVLVPILSEAKLLSIGLFFHCVHMFIYSIAWTSWVPYAAAMFSILFNFSQPCIRSIVSK 60
           +P+L P++ E  +L   L     + ++  +AW  WVPY +A F I++   +P   +I+S+
Sbjct: 293 LPILNPLVGEKVILCSALLASIAYAWLSGLAWAPWVPYLSASFGIIYVLVKPATYAIISR 352

Query: 61  QVGPHEQGRAQGCISGICSIAHIVSPLAFSPLTALFLSERAPFNFPGFSIMCIGFASMVS 120
                 QG+AQ  I+G  SI+ ++SP+  SPLT+LFLS  APF   GFSI+C     MVS
Sbjct: 353 ASSSTNQGKAQTFIAGAQSISDLLSPIVMSPLTSLFLSSDAPFECKGFSILCAS-VCMVS 411

Query: 121 FVQSI 125
           ++ S+
Sbjct: 412 YLFSV 416


>Medtr1g112980.2 | MFS transporter | HC | chr1:51252687-51260095 |
           20130731
          Length = 361

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 50/67 (74%)

Query: 1   MPVLVPILSEAKLLSIGLFFHCVHMFIYSIAWTSWVPYAAAMFSILFNFSQPCIRSIVSK 60
           MP+LVP + E KLL+ GLF  C+ M +YSI+W++WVPYA A FS+L    +P + SI SK
Sbjct: 293 MPILVPAVGEEKLLTTGLFVSCISMLMYSISWSAWVPYALAGFSVLGVLVRPSLTSIASK 352

Query: 61  QVGPHEQ 67
           QVGP+EQ
Sbjct: 353 QVGPNEQ 359


>Medtr1g092880.3 | hippocampus abundant transcript-like protein | HC
           | chr1:41827454-41823758 | 20130731
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 54/93 (58%)

Query: 1   MPVLVPILSEAKLLSIGLFFHCVHMFIYSIAWTSWVPYAAAMFSILFNFSQPCIRSIVSK 60
           +P+L P++ E  +L   L     + ++  +AW  WVPY +A F I++   +P   +I+S+
Sbjct: 293 LPILNPLVGEKVILCSALLASIAYAWLSGLAWAPWVPYLSASFGIIYVLVKPATYAIISR 352

Query: 61  QVGPHEQGRAQGCISGICSIAHIVSPLAFSPLT 93
                 QG+AQ  I+G  SI+ ++SP+  SPLT
Sbjct: 353 ASSSTNQGKAQTFIAGAQSISDLLSPIVMSPLT 385


>Medtr1g112980.3 | MFS transporter | HC | chr1:51252683-51260095 |
           20130731
          Length = 394

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 39/54 (72%)

Query: 1   MPVLVPILSEAKLLSIGLFFHCVHMFIYSIAWTSWVPYAAAMFSILFNFSQPCI 54
           MP+LVP + E KLL+ GLF  C+ M +YSI+W++WVPYA A FS+L    +P +
Sbjct: 293 MPILVPAVGEEKLLTTGLFVSCISMLMYSISWSAWVPYALAGFSVLGVLVRPSV 346