Miyakogusa Predicted Gene

Lj1g3v2251630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2251630.1 tr|G7J5W8|G7J5W8_MEDTR Syringolide-induced
protein 14-1-1 OS=Medicago truncatula GN=MTR_3g114750 PE=,60.44,2e-18,
,CUFF.28731.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g114750.1 | syringolide-induced protein 14-1-1 | HC | chr3...    96   6e-21
Medtr1g026110.1 | syringolide-induced protein 14-1-1 | HC | chr1...    87   5e-18

>Medtr3g114750.1 | syringolide-induced protein 14-1-1 | HC |
           chr3:53578180-53579579 | 20130731
          Length = 245

 Score = 96.3 bits (238), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 64/91 (70%), Gaps = 9/91 (9%)

Query: 10  RNKILKILPKATRALAKKFQNHPFSSGRDHKSSPENNATKWVRLHGGMGFSKPVVPMIPV 69
           RNKILKILPK    +   FQNHPFS GRDHKS  ++NATKW R HG  GFS P+  +IP 
Sbjct: 8   RNKILKILPKT---ITINFQNHPFSPGRDHKSR-QDNATKWARPHGVKGFSGPIQSIIPR 63

Query: 70  EARRKLEDSIGDNGIEIYNQEPPSPEISCMG 100
           EARRK +D    NGI+   +EP SP+ISCMG
Sbjct: 64  EARRKSKDI---NGIDY--EEPTSPKISCMG 89


>Medtr1g026110.1 | syringolide-induced protein 14-1-1 | HC |
           chr1:8431354-8432503 | 20130731
          Length = 247

 Score = 86.7 bits (213), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 7/100 (7%)

Query: 8   LRRNKILKILPKATRALAKKFQNHPFSSGRDHKSSPENNATKW-VRLHG-GMGFSKPVVP 65
           + ++K  K+  K  +A+   FQN PFS GRDHK   EN+ TKW  + H  G GFS P+V 
Sbjct: 1   MEKDKQSKLRNKFMKAITITFQNAPFSPGRDHKFRSENSNTKWGAKTHAVGKGFSGPMVT 60

Query: 66  MIPVEARRKLEDSIGDNGIEIYNQEPPSPEISCMGQITYN 105
           MIP EARRK +D  G+       QEP SP+ISCMGQI ++
Sbjct: 61  MIPYEARRKPKDGGGNE-----TQEPTSPKISCMGQIKHH 95