Miyakogusa Predicted Gene

Lj1g3v2249550.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2249550.2 Non Characterized Hit- tr|I1EJB7|I1EJB7_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica
PE,33.66,4e-19,seg,NULL; Thioredoxin-like,Thioredoxin-like fold; no
description,Thioredoxin-like fold; Thioredoxin_,CUFF.28736.2
         (229 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0332s0020.1 | thioredoxin protein | HC | scaffold0332:5055-...   300   7e-82

>Medtr0332s0020.1 | thioredoxin protein | HC |
           scaffold0332:5055-7693 | 20130731
          Length = 230

 Score =  300 bits (768), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 140/202 (69%), Positives = 166/202 (82%)

Query: 26  SPAGADYIPPAKTDGFVYLNRRSFNFDSILIEAFYDPLCPDSRDSWPPLKQALHDYGSGV 85
           S  G DYIPP K DGFVY NR   ++D+I IEAFYDPLCPDS DSWPPLK+ALH Y S V
Sbjct: 17  SLVGGDYIPPKKYDGFVYKNRHHLSYDTIQIEAFYDPLCPDSADSWPPLKKALHHYSSRV 76

Query: 86  SLVVHLLPLPYHDNAYVASRALHDVNALNSSATFPLLELLFKDQEKFYGAQTRNLSRASI 145
           S VVHLLPLPYHDNA+VASRALH VN+LN +ATFPLLE  FK Q  F+GA TRNLSRA I
Sbjct: 77  SFVVHLLPLPYHDNAFVASRALHIVNSLNRTATFPLLEAFFKYQAAFFGAPTRNLSRAFI 136

Query: 146 QEEFVKSATEVIGSSFYTSVKNGFNDSKTDHQTRISFKYAASRGVYGTPFFYVNGFLLPD 205
            +E VK  + ++G+S++TS+KNGFND+ +DH TRISFKYAASRGV GTPFFYVNGF+LPD
Sbjct: 137 VDEIVKFTSAIVGNSYHTSIKNGFNDTNSDHLTRISFKYAASRGVSGTPFFYVNGFVLPD 196

Query: 206 VGDSIDYKTWKKIIDPLVGAEK 227
            G++++Y  W+ IIDPL+GA+K
Sbjct: 197 AGNALNYSDWRSIIDPLIGAKK 218