Miyakogusa Predicted Gene

Lj1g3v2217460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2217460.1 Non Characterized Hit- tr|I3MBX5|I3MBX5_SPETR
Uncharacterized protein (Fragment) OS=Spermophilus
tri,44.04,2e-18,La,RNA-binding protein Lupus La; seg,NULL; Domain in
the RNA-binding Lupus La protein;,RNA-binding p,CUFF.28719.1
         (507 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g025920.1 | LA-related protein 6 LA RNA-binding domain pro...   344   1e-94
Medtr3g114340.1 | LA-related protein 6 LA RNA-binding domain pro...   319   4e-87
Medtr3g114450.1 | LA-related protein 6 LA RNA-binding domain pro...   311   1e-84
Medtr1g025920.2 | LA-related protein 6 LA RNA-binding domain pro...   300   2e-81
Medtr3g114450.3 | LA-related protein 6 LA RNA-binding domain pro...   247   2e-65
Medtr5g022790.1 | ATP synthase, A subunit | HC | chr5:9032818-90...   196   6e-50
Medtr3g114450.2 | LA-related protein 6 LA RNA-binding domain pro...   194   2e-49
Medtr5g022790.3 | ATP synthase, A subunit | HC | chr5:9031583-90...   178   1e-44
Medtr5g022790.2 | ATP synthase, A subunit | HC | chr5:9031583-90...   177   2e-44
Medtr8g075120.1 | LA-related protein 6 LA RNA-binding domain pro...   136   6e-32
Medtr5g088200.1 | LA-related protein 2 LA RNA-binding domain pro...   106   4e-23
Medtr2g019620.1 | LA-related protein 6 LA RNA-binding domain pro...    63   6e-10
Medtr4g086860.1 | LA-related protein 6 LA RNA-binding domain pro...    60   4e-09
Medtr7g117595.3 | LA-related protein 6 LA RNA-binding domain pro...    59   1e-08
Medtr7g117595.1 | LA-related protein 6 LA RNA-binding domain pro...    59   1e-08
Medtr7g117595.2 | LA-related protein 6 LA RNA-binding domain pro...    55   1e-07

>Medtr1g025920.1 | LA-related protein 6 LA RNA-binding domain
           protein | HC | chr1:8346097-8339214 | 20130731
          Length = 546

 Score =  344 bits (883), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 202/434 (46%), Positives = 256/434 (58%), Gaps = 42/434 (9%)

Query: 86  VAEVSPVMGAVSWPALSEAAKL--------SVKPXXXXXXXXXXXXXXQGPVTPHSPQTQ 137
             E+ PVMGA SWPALSE+AK+        S                 QGP+  HSPQ Q
Sbjct: 143 AVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQ 202

Query: 138 ANSNSNVKPSPAMNTDMPNRQRSTKQGGSNSNGPAPVRGNFTNTAXXXXXXXXXXXXXXX 197
             S SN K S   N ++PNR R  ++   ++ GP P + + +N                 
Sbjct: 203 G-STSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPP 261

Query: 198 XXXXXXXXSFTN---GVPGPSPRDPFRNNNWDTRSPVGGFGPPMNEQRSPSRRGNFGHHP 254
                   S+ N    +P  SPRD  RNNNWD R  VGG           SRRG+FG HP
Sbjct: 262 AV------SYPNMLPSIPDSSPRDHHRNNNWDARPFVGGS----------SRRGHFGSHP 305

Query: 255 RGGNGSHHNNYDNRRDQERLNYANSRDARAPQQRMSPRGLMRFPPANAAPPFMGPQPLQP 314
           RG    H N+Y +RR+ +R NYAN+RDA APQ RM PRG++R PP + A  F+GPQ + P
Sbjct: 306 RGDGSYHQNSYSSRREHDRGNYANTRDAHAPQPRMPPRGILRPPPPSTAA-FLGPQTIGP 364

Query: 315 FLNPAGFPEFYYFPTLQLESFGRMPFFTHAPPPAMFFPVAETPLTDVIIKQIDYYFSDTN 374
           F  P  +P+FYYFPT+ L+ F  MP F H P PA FFP AE+ L++VI+ QIDYYFSD N
Sbjct: 365 FPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSLSNVIVNQIDYYFSDIN 424

Query: 375 LVKDNYLRSNMDEQGWVPITLIANFPRVKSLTSNVELILDSLKTSSVVEVQGDKLRKRDD 434
           L  D +L+SNMDE+GWVPITLIANFPRVK+LTSN++LILDS++ S+VV+VQGDKLR+R +
Sbjct: 425 LANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGDKLRRR-N 483

Query: 435 WMKWLPSTQREVDSSSMSTGESNYNNIARDFEKITLNEALLDKVNFDPTTNGEAIESSDQ 494
           W+  L S Q + D+ S+S  ES  N+   DF+ ITL          D TT  E  ESS Q
Sbjct: 484 WIDRLTSAQVQADAGSVSPIESRDNSFTADFQTITL----------DKTTKDEG-ESSRQ 532

Query: 495 SQFTIG-DAAKSCN 507
           SQ + G D A + N
Sbjct: 533 SQLSNGSDVAGNIN 546


>Medtr3g114340.1 | LA-related protein 6 LA RNA-binding domain
           protein | HC | chr3:53401536-53399026 | 20130731
          Length = 432

 Score =  319 bits (817), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 205/421 (48%), Positives = 258/421 (61%), Gaps = 37/421 (8%)

Query: 86  VAEVSPVMGAVSWPALSEAAKLSVKPXXXXXXXXXXXXXXQGPVTPHSPQTQANSNSNV- 144
           VAEV+PVMGAVSWPALS  AK S K               QGPV  +SPQ QA + +   
Sbjct: 32  VAEVNPVMGAVSWPALS--AKPSAKLTSDSISAVGSISISQGPVISNSPQKQATATATAA 89

Query: 145 --KPSPAMNTD--MPNRQRS-TKQGGSNSNGPAPVRGNFTNTAXXXXXXXXXXXXXXXXX 199
             + +P MN    + NRQ+   ++GG N+N P P+  N +N                   
Sbjct: 90  NARHTPPMNHSHSVSNRQQKPMERGGVNNNEPGPLSNNLSNPPQANHQPSVSPPFPVLQI 149

Query: 200 XXXXXXSFTNGVPGPSPRDPFRNNN-WDTRSPVGGFGPPMNEQRSPSRRGNFGHHPRGGN 258
                    +GV        ++NNN W  RSP GG+G P++E    S RGN+GH PR   
Sbjct: 150 PPNTF--LVDGV------QSYKNNNGWGPRSPAGGYGLPVDEH---SHRGNYGHRPR--- 195

Query: 259 GSHHNNYDNRRDQERLNYANSRDARAPQQRMSPRGLMRFPPANAAPPFMG--PQPLQPFL 316
               NNY  RR+Q+  N  N+RDA  PQ RM   G +R    N+A  ++G  P P++PFL
Sbjct: 196 ----NNYGTRRNQDPGNTMNTRDAHPPQHRMHSEGFLRPTLPNSA--YLGSQPMPMRPFL 249

Query: 317 NPAGFPEFYYFPTLQLESFGRMPFFTHAPPPAMFFPVAE-----TPLTDVIIKQIDYYFS 371
           NPAGF EFYY+PTLQ E FG MPF TH PPPAMFFPVAE     TP T++I+KQIDYYFS
Sbjct: 250 NPAGFHEFYYYPTLQFEPFGGMPFLTHPPPPAMFFPVAEETPPTTPPTNIILKQIDYYFS 309

Query: 372 DTNLVKDNYLRSNMDEQGWVPITLIANFPRVKSLTSNVELILDSLKTSSVVEVQGDKLRK 431
           D NL  D +L+SNMDE GWVP++LIANFPRVK+LT+N+ELILDSL+ SSVVEV GDKLRK
Sbjct: 310 DVNLTNDEFLKSNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNSSVVEVNGDKLRK 369

Query: 432 RDDWMKWLPSTQREVDSSSMSTGESNYNNIARDFEKITLNEALLDKVNFDPTTNGEAIES 491
           R +W ++L    ++V SSS+S+  S   NI  DF+KITL+EA + K N   TTNG++   
Sbjct: 370 RKEWARFLSPVYQQVGSSSISSVGSTCKNIIADFDKITLDEATVLK-NSKTTTNGDSAGE 428

Query: 492 S 492
           S
Sbjct: 429 S 429


>Medtr3g114450.1 | LA-related protein 6 LA RNA-binding domain
           protein | HC | chr3:53444494-53441023 | 20130731
          Length = 471

 Score =  311 bits (797), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 188/382 (49%), Positives = 237/382 (62%), Gaps = 35/382 (9%)

Query: 86  VAEVSPVMGAVSWPALSE--AAKLSVKPXXXXXXXXXXXXXXQGPVTPHSPQTQANSNS- 142
           VAEVSPVMGAVSWPALS   +AKL+                 QGPV  +SPQ QA + + 
Sbjct: 101 VAEVSPVMGAVSWPALSAKPSAKLTSD-SISAVDGAGSISISQGPVISNSPQKQATATAA 159

Query: 143 NVKPSPAMNTD--MPNRQRS-TKQGGSNSNGPAPVRGNFTNTAXXXXXXXXXXXXXXXXX 199
           N + +P MN    + NRQ+   ++GG N+N P P+  N +N                   
Sbjct: 160 NARHTPPMNHSHSVSNRQQKPMERGGGNNNEPGPLSNNLSNPPQVNHQPSVAPPFPVLQI 219

Query: 200 XXXXXXSFTNGVPGPSPRDPFRNNN-WDTRSPVGGFGPPMNEQRSPSRRGNFGHHPRGGN 258
                    +GV        ++NNN W  RSP GG+G P++E    S RGN+GH PR   
Sbjct: 220 TPNTF--LVDGV------QSYKNNNGWGPRSPAGGYGLPVDEH---SHRGNYGHRPR--- 265

Query: 259 GSHHNNYDNRRDQERLNYANSRDARAPQQRMSPRGLMRFPPANAAPPFMG--PQPLQPFL 316
               NNY  RR+Q+  N  N+RDA  PQ RM   G +R    N+A  ++G  P P++PFL
Sbjct: 266 ----NNYGTRRNQDPGNTMNTRDAHPPQHRMHSEGFLRPTLPNSA--YLGSQPMPMRPFL 319

Query: 317 NPAGFPEFYYFPTLQLESFGRMPFFTHAPPPAMFFPVAE-----TPLTDVIIKQIDYYFS 371
           NPAGF EFYY+PTLQ E FG MPF TH PPPAMFFPVAE     TP T++I+KQIDYYFS
Sbjct: 320 NPAGFHEFYYYPTLQFEPFGGMPFLTHPPPPAMFFPVAEETPPTTPPTNIILKQIDYYFS 379

Query: 372 DTNLVKDNYLRSNMDEQGWVPITLIANFPRVKSLTSNVELILDSLKTSSVVEVQGDKLRK 431
           D NL  D +L+SNMDE GWVP++LIANFPRVK+LT+N+ELILDSL+ SSVVEV GDKLRK
Sbjct: 380 DVNLTNDEFLKSNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNSSVVEVNGDKLRK 439

Query: 432 RDDWMKWLPSTQREVDSSSMST 453
           R +W ++L    ++V SSS+S+
Sbjct: 440 RKEWARFLSPVYQQVGSSSISS 461


>Medtr1g025920.2 | LA-related protein 6 LA RNA-binding domain
           protein | HC | chr1:8346097-8339222 | 20130731
          Length = 518

 Score =  300 bits (768), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 167/350 (47%), Positives = 211/350 (60%), Gaps = 29/350 (8%)

Query: 87  AEVSPVMGAVSWPALSEAAKL--------SVKPXXXXXXXXXXXXXXQGPVTPHSPQTQA 138
            E+ PVMGA SWPALSE+AK+        S                 QGP+  HSPQ Q 
Sbjct: 144 VEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQG 203

Query: 139 NSNSNVKPSPAMNTDMPNRQRSTKQGGSNSNGPAPVRGNFTNTAXXXXXXXXXXXXXXXX 198
            S SN K S   N ++PNR R  ++   ++ GP P + + +N                  
Sbjct: 204 -STSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPA 262

Query: 199 XXXXXXXSFTN---GVPGPSPRDPFRNNNWDTRSPVGGFGPPMNEQRSPSRRGNFGHHPR 255
                  S+ N    +P  SPRD  RNNNWD R  VGG           SRRG+FG HPR
Sbjct: 263 V------SYPNMLPSIPDSSPRDHHRNNNWDARPFVGGS----------SRRGHFGSHPR 306

Query: 256 GGNGSHHNNYDNRRDQERLNYANSRDARAPQQRMSPRGLMRFPPANAAPPFMGPQPLQPF 315
           G    H N+Y +RR+ +R NYAN+RDA APQ RM PRG++R PP + A  F+GPQ + PF
Sbjct: 307 GDGSYHQNSYSSRREHDRGNYANTRDAHAPQPRMPPRGILRPPPPSTAA-FLGPQTIGPF 365

Query: 316 LNPAGFPEFYYFPTLQLESFGRMPFFTHAPPPAMFFPVAETPLTDVIIKQIDYYFSDTNL 375
             P  +P+FYYFPT+ L+ F  MP F H P PA FFP AE+ L++VI+ QIDYYFSD NL
Sbjct: 366 PAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSLSNVIVNQIDYYFSDINL 425

Query: 376 VKDNYLRSNMDEQGWVPITLIANFPRVKSLTSNVELILDSLKTSSVVEVQ 425
             D +L+SNMDE+GWVPITLIANFPRVK+LTSN++LILDS++ S+VV+VQ
Sbjct: 426 ANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQ 475


>Medtr3g114450.3 | LA-related protein 6 LA RNA-binding domain
           protein | HC | chr3:53444494-53442560 | 20130731
          Length = 411

 Score =  247 bits (630), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 157/331 (47%), Positives = 195/331 (58%), Gaps = 35/331 (10%)

Query: 86  VAEVSPVMGAVSWPALSE--AAKLSVKPXXXXXXXXXXXXXXQGPVTPHSPQTQANSNS- 142
           VAEVSPVMGAVSWPALS   +AKL+                 QGPV  +SPQ QA + + 
Sbjct: 101 VAEVSPVMGAVSWPALSAKPSAKLTSD-SISAVDGAGSISISQGPVISNSPQKQATATAA 159

Query: 143 NVKPSPAMNTD--MPNRQRS-TKQGGSNSNGPAPVRGNFTNTAXXXXXXXXXXXXXXXXX 199
           N + +P MN    + NRQ+   ++GG N+N P P+  N +N                   
Sbjct: 160 NARHTPPMNHSHSVSNRQQKPMERGGGNNNEPGPLSNNLSNPPQVNHQPSVAPPFPVLQI 219

Query: 200 XXXXXXSFTNGVPGPSPRDPFRNNN-WDTRSPVGGFGPPMNEQRSPSRRGNFGHHPRGGN 258
                    +GV        ++NNN W  RSP GG+G P++E    S RGN+GH PR   
Sbjct: 220 TPNTF--LVDGV------QSYKNNNGWGPRSPAGGYGLPVDEH---SHRGNYGHRPR--- 265

Query: 259 GSHHNNYDNRRDQERLNYANSRDARAPQQRMSPRGLMRFPPANAAPPFMG--PQPLQPFL 316
               NNY  RR+Q+  N  N+RDA  PQ RM   G +R    N+A  ++G  P P++PFL
Sbjct: 266 ----NNYGTRRNQDPGNTMNTRDAHPPQHRMHSEGFLRPTLPNSA--YLGSQPMPMRPFL 319

Query: 317 NPAGFPEFYYFPTLQLESFGRMPFFTHAPPPAMFFPVAE-----TPLTDVIIKQIDYYFS 371
           NPAGF EFYY+PTLQ E FG MPF TH PPPAMFFPVAE     TP T++I+KQIDYYFS
Sbjct: 320 NPAGFHEFYYYPTLQFEPFGGMPFLTHPPPPAMFFPVAEETPPTTPPTNIILKQIDYYFS 379

Query: 372 DTNLVKDNYLRSNMDEQGWVPITLIANFPRV 402
           D NL  D +L+SNMDE GWVP++LIANFPRV
Sbjct: 380 DVNLTNDEFLKSNMDEHGWVPVSLIANFPRV 410


>Medtr5g022790.1 | ATP synthase, A subunit | HC |
           chr5:9032818-9026232 | 20130731
          Length = 670

 Score =  196 bits (497), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 148/369 (40%), Positives = 191/369 (51%), Gaps = 39/369 (10%)

Query: 86  VAEVSPVMGAVSWPALSEAAKLSVKPXXXXXXXXXXXXX-XQG-PVTPHSP-QTQANSNS 142
           V+EV PVM A SWPALS++A+ S K                QG   TP S  Q Q   N 
Sbjct: 93  VSEVQPVMDAHSWPALSDSARGSTKSESSKGLLDGSSVSPWQGMESTPSSSMQRQVGDNV 152

Query: 143 NVKPSPAMNTDMPNRQRSTKQGGSN--SNGPAPVRGNFTNTAXXXXXXXXXXXXXXXXXX 200
           NV      N   P RQ+S K   SN  SNG     G+   +A                  
Sbjct: 153 NV------NNMAPTRQKSIKHNSSNASSNG-----GHTQQSAPQVSIAATGSHTSSSRDH 201

Query: 201 XXXXXSFTNGVPGPSPRDPFRNNNWDTRSPVGGFGPPMN-EQRSPSRRGNFGHHPRGGNG 259
                  T      SPRD  ++    T+    GF P  + +QR+  R  N G H RG   
Sbjct: 202 TQSPRDHTQ-----SPRDHAQSPRDHTQR--SGFVPSDHPQQRNSFRHRNGGPHQRGDGS 254

Query: 260 SHHNNYDNRRDQE---RLNYANSRDARAPQQRMSPRGLMRFPPANAAPPFMGPQPLQPFL 316
            HH+NY NRRDQ+   R NY N RD   P  R+SPR +    P N+AP F+ P PL+PF 
Sbjct: 255 HHHHNYGNRRDQDWNSRRNY-NGRDMHVPP-RVSPRIIRPSLPPNSAP-FIHPPPLRPFG 311

Query: 317 NPAGFPEF------YYFPTLQLESFGRMPFFTHAPPPAMFFPVAETPLTDVIIKQIDYYF 370
              GF E       +  P   ++S   +PF    PP  +++   +  L   I+ QIDYYF
Sbjct: 312 GHMGFHELAAPVVLFAGPPPPIDSLRGVPF---VPPMPLYYAGPDPQLHSKIVNQIDYYF 368

Query: 371 SDTNLVKDNYLRSNMDEQGWVPITLIANFPRVKSLTSNVELILDSLKTSSVVEVQGDKLR 430
           S+ NLVKD +LR NMD QGWVPITLIA F +V  LT N++LI+D+++TSSVVEVQGDK+R
Sbjct: 369 SNENLVKDIFLRKNMDAQGWVPITLIAGFKKVMDLTDNIQLIIDAIRTSSVVEVQGDKIR 428

Query: 431 KRDDWMKWL 439
           +++DW KW+
Sbjct: 429 RQNDWEKWI 437


>Medtr3g114450.2 | LA-related protein 6 LA RNA-binding domain
           protein | HC | chr3:53444494-53441023 | 20130731
          Length = 379

 Score =  194 bits (493), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/299 (44%), Positives = 168/299 (56%), Gaps = 35/299 (11%)

Query: 86  VAEVSPVMGAVSWPALSE--AAKLSVKPXXXXXXXXXXXXXXQGPVTPHSPQTQANSNS- 142
           VAEVSPVMGAVSWPALS   +AKL+                 QGPV  +SPQ QA + + 
Sbjct: 101 VAEVSPVMGAVSWPALSAKPSAKLTSD-SISAVDGAGSISISQGPVISNSPQKQATATAA 159

Query: 143 NVKPSPAMNTD--MPNRQ-RSTKQGGSNSNGPAPVRGNFTNTAXXXXXXXXXXXXXXXXX 199
           N + +P MN    + NRQ +  ++GG N+N P P+  N +N                   
Sbjct: 160 NARHTPPMNHSHSVSNRQQKPMERGGGNNNEPGPLSNNLSNPPQVNHQPSVAPPFPVLQI 219

Query: 200 XXXXXXSFTNGVPGPSPRDPFRNNN-WDTRSPVGGFGPPMNEQRSPSRRGNFGHHPRGGN 258
                    +GV        ++NNN W  RSP GG+G P++E    S RGN+GH PR   
Sbjct: 220 TPNTF--LVDGV------QSYKNNNGWGPRSPAGGYGLPVDEH---SHRGNYGHRPR--- 265

Query: 259 GSHHNNYDNRRDQERLNYANSRDARAPQQRMSPRGLMRFPPANAAPPFMG--PQPLQPFL 316
               NNY  RR+Q+  N  N+RDA  PQ RM   G +R    N+A  ++G  P P++PFL
Sbjct: 266 ----NNYGTRRNQDPGNTMNTRDAHPPQHRMHSEGFLRPTLPNSA--YLGSQPMPMRPFL 319

Query: 317 NPAGFPEFYYFPTLQLESFGRMPFFTHAPPPAMFFPVAE-----TPLTDVIIKQIDYYF 370
           NPAGF EFYY+PTLQ E FG MPF TH PPPAMFFPVAE     TP T++I+KQIDYYF
Sbjct: 320 NPAGFHEFYYYPTLQFEPFGGMPFLTHPPPPAMFFPVAEETPPTTPPTNIILKQIDYYF 378


>Medtr5g022790.3 | ATP synthase, A subunit | HC |
           chr5:9031583-9028239 | 20130731
          Length = 387

 Score =  178 bits (451), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/209 (47%), Positives = 132/209 (63%), Gaps = 15/209 (7%)

Query: 240 EQRSPSRRGNFGHHPRGGNGSHHNNYDNRRDQE---RLNYANSRDARAPQQRMSPRGLMR 296
           +QR+  R  N G H RG    HH+NY NRRDQ+   R NY N RD   P  R+SPR +  
Sbjct: 100 QQRNSFRHRNGGPHQRGDGSHHHHNYGNRRDQDWNSRRNY-NGRDMHVPP-RVSPRIIRP 157

Query: 297 FPPANAAPPFMGPQPLQPFLNPAGFPEF------YYFPTLQLESFGRMPFFTHAPPPAMF 350
             P N+AP F+ P PL+PF    GF E       +  P   ++S   +PF    PP  ++
Sbjct: 158 SLPPNSAP-FIHPPPLRPFGGHMGFHELAAPVVLFAGPPPPIDSLRGVPF---VPPMPLY 213

Query: 351 FPVAETPLTDVIIKQIDYYFSDTNLVKDNYLRSNMDEQGWVPITLIANFPRVKSLTSNVE 410
           +   +  L   I+ QIDYYFS+ NLVKD +LR NMD QGWVPITLIA F +V  LT N++
Sbjct: 214 YAGPDPQLHSKIVNQIDYYFSNENLVKDIFLRKNMDAQGWVPITLIAGFKKVMDLTDNIQ 273

Query: 411 LILDSLKTSSVVEVQGDKLRKRDDWMKWL 439
           LI+D+++TSSVVEVQGDK+R+++DW KW+
Sbjct: 274 LIIDAIRTSSVVEVQGDKIRRQNDWEKWI 302


>Medtr5g022790.2 | ATP synthase, A subunit | HC |
           chr5:9031583-9026232 | 20130731
          Length = 535

 Score =  177 bits (450), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 167/319 (52%), Gaps = 36/319 (11%)

Query: 133 SPQTQANSNSNVKPSPAMNTDMPNRQRSTKQGGSN--SNGPAPVRGNFTNTAXXXXXXXX 190
           S Q Q   N NV      N   P RQ+S K   SN  SNG     G+   +A        
Sbjct: 8   SMQRQVGDNVNV------NNMAPTRQKSIKHNSSNASSNG-----GHTQQSAPQVSIAAT 56

Query: 191 XXXXXXXXXXXXXXXSFTNGVPGPSPRDPFRNNNWDTRSPVGGFGPPMN-EQRSPSRRGN 249
                            T      SPRD  ++    T+    GF P  + +QR+  R  N
Sbjct: 57  GSHTSSSRDHTQSPRDHTQ-----SPRDHAQSPRDHTQR--SGFVPSDHPQQRNSFRHRN 109

Query: 250 FGHHPRGGNGSHHNNYDNRRDQE---RLNYANSRDARAPQQRMSPRGLMRFPPANAAPPF 306
            G H RG    HH+NY NRRDQ+   R NY N RD   P  R+SPR +    P N+AP F
Sbjct: 110 GGPHQRGDGSHHHHNYGNRRDQDWNSRRNY-NGRDMHVPP-RVSPRIIRPSLPPNSAP-F 166

Query: 307 MGPQPLQPFLNPAGFPEF------YYFPTLQLESFGRMPFFTHAPPPAMFFPVAETPLTD 360
           + P PL+PF    GF E       +  P   ++S   +PF    PP  +++   +  L  
Sbjct: 167 IHPPPLRPFGGHMGFHELAAPVVLFAGPPPPIDSLRGVPF---VPPMPLYYAGPDPQLHS 223

Query: 361 VIIKQIDYYFSDTNLVKDNYLRSNMDEQGWVPITLIANFPRVKSLTSNVELILDSLKTSS 420
            I+ QIDYYFS+ NLVKD +LR NMD QGWVPITLIA F +V  LT N++LI+D+++TSS
Sbjct: 224 KIVNQIDYYFSNENLVKDIFLRKNMDAQGWVPITLIAGFKKVMDLTDNIQLIIDAIRTSS 283

Query: 421 VVEVQGDKLRKRDDWMKWL 439
           VVEVQGDK+R+++DW KW+
Sbjct: 284 VVEVQGDKIRRQNDWEKWI 302


>Medtr8g075120.1 | LA-related protein 6 LA RNA-binding domain
           protein | HC | chr8:31755422-31758254 | 20130731
          Length = 455

 Score =  136 bits (342), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/259 (39%), Positives = 146/259 (56%), Gaps = 32/259 (12%)

Query: 230 PVGGFGPPMNEQRSPSRRGNF------GHHPRGGNGSHHNNYDNRRDQERLNY---ANSR 280
           P  GF P  N+Q  P RR +F      G  PRG +GSHH N  +RRDQ+R N    A++R
Sbjct: 195 PRAGFVP--NDQ--PQRRNSFRNRNGGGLQPRG-DGSHHFNSGSRRDQDRGNQDWNAHNR 249

Query: 281 DARAPQQRMSPRGLMRF----PPAN-AAPPFMGPQPLQPFLNPAGFPEF----YYFPTLQ 331
           +        SPR + +F    PP N A      P P+ P++   G+ +      Y P L 
Sbjct: 250 NFNNRDNYRSPRFVPQFVRPPPPTNHAQYYPPPPPPIPPYMGSYGYHDLTLQMMYGPPLH 309

Query: 332 LESFGRMPFFTHAPPPAMFFPVAETPLTDVIIKQIDYYFSDTNLVKDNYLRSNMDEQGWV 391
           +E    +PF       A+FFP  ++ L   I+ QIDYYFSD NL  D YL+ NMD+QGWV
Sbjct: 310 VEPPRSVPF-VQPISSAIFFPPPDSELQTKIVNQIDYYFSDLNLNNDTYLKRNMDDQGWV 368

Query: 392 PITLIANFPRVKSLTSNVELILDSLKTSSVVEVQGDKLRKRDDWMKWLPSTQREVDSSSM 451
           P+ LIA F +VK LT N+++++D+++TSSVVEVQ DK+R+R +W+  L S    V+ S +
Sbjct: 369 PLNLIAGFNKVKLLTDNIQIVVDAVRTSSVVEVQDDKIRRR-NWIT-LSSQFHNVNGSQI 426

Query: 452 STGESNYNNIARDFEKITL 470
           +        +A++ + I L
Sbjct: 427 AA------QLAKNIQNIDL 439


>Medtr5g088200.1 | LA-related protein 2 LA RNA-binding domain
           protein | HC | chr5:38241687-38234903 | 20130731
          Length = 911

 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 96/170 (56%), Gaps = 19/170 (11%)

Query: 346 PPAMFFPVAETPLTDV----IIKQIDYYFSDTNLVKDNYLRSNMDEQGWVPITLIANFPR 401
           PP    P + TP T      I+KQI+YYFSD NL  D YL   MD+QGWVPI+ +A+F R
Sbjct: 298 PPVNSAPQSPTPETQSLRASILKQIEYYFSDENLHNDRYLIGLMDDQGWVPISTVADFKR 357

Query: 402 VKSLTSNVELILDSLKTSSVVEVQGDKLRKRDDWMKWLPST---------QREVDSSSMS 452
           VK +++++  I+D L+ S  VEVQ DK+RKR++W KW+ ++         Q + D    S
Sbjct: 358 VKRMSTDIPFIVDVLQNSDNVEVQDDKIRKRNNWSKWIQTSSGNSGSSVAQVQQDQHVES 417

Query: 453 TGESNYN-----NIARDFEKITLNEALLDKVNFDPT-TNGEAIESSDQSQ 496
           T  S  N     +  ++  + TLN++  D  + +   +N +  E SD +Q
Sbjct: 418 TANSCQNSDTVVDKTKESSEATLNDSAHDSTSTEQNQSNKDTFEVSDVNQ 467


>Medtr2g019620.1 | LA-related protein 6 LA RNA-binding domain
           protein, putative | HC | chr2:6438990-6443888 | 20130731
          Length = 406

 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 7/85 (8%)

Query: 353 VAET--PLTDV---IIKQIDYYFSDTNLVKDNYLRS--NMDEQGWVPITLIANFPRVKSL 405
           VAET   L D+   IIKQ++YYFSD NL  D Y+ S    +++G+VPI  IA+F ++K L
Sbjct: 93  VAETVVSLDDLKLKIIKQVEYYFSDENLPTDKYMLSLVKRNKEGFVPIPAIASFRKMKRL 152

Query: 406 TSNVELILDSLKTSSVVEVQGDKLR 430
           T +   I  +LK SS++ V GD  R
Sbjct: 153 TRDHLFIAAALKESSLLVVSGDGKR 177


>Medtr4g086860.1 | LA-related protein 6 LA RNA-binding domain
           protein | HC | chr4:34040137-34037050 | 20130731
          Length = 404

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 19/127 (14%)

Query: 325 YYFPTLQ-LESFGRMPFFT--HAPPPAMFFPVAETP------------LTDVIIKQIDYY 369
           Y++P  Q L   G   +F      P A   P A               L   I+KQ++Y 
Sbjct: 51  YFYPCFQILGGSGESDWFYVGDQDPSACLIPNANVSQPNCSKNVLNPDLQQKIVKQVEYQ 110

Query: 370 FSDTNLVKDNYLRSNM--DEQGWVPITLIANFPRVKSLTSNVELILDSLKTSS--VVEVQ 425
           FSD +L+ +   +  M  D +G+VPIT+IA+  ++KSL +N+ L+  +++ SS  V+   
Sbjct: 111 FSDLSLLANESFQKQMNKDPEGYVPITVIASTKKIKSLVNNIHLLTQAIRHSSKLVLSAD 170

Query: 426 GDKLRKR 432
           G K++++
Sbjct: 171 GKKVKRK 177


>Medtr7g117595.3 | LA-related protein 6 LA RNA-binding domain
           protein, putative | HC | chr7:48763422-48774734 |
           20130731
          Length = 424

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 4/75 (5%)

Query: 362 IIKQIDYYFSDTNLVKDNYLRS--NMDEQGWVPITLIANFPRVKSLTSNVELILDSLKTS 419
           I+KQ++YYFSD NL   ++L    N D +G+VPI+++A+F ++K+L ++   + + L+ S
Sbjct: 118 ILKQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALITSHSQLANVLRNS 177

Query: 420 S--VVEVQGDKLRKR 432
           S  VV   G K++++
Sbjct: 178 SKLVVSEDGKKIKRQ 192


>Medtr7g117595.1 | LA-related protein 6 LA RNA-binding domain
           protein, putative | HC | chr7:48763422-48774734 |
           20130731
          Length = 440

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 4/75 (5%)

Query: 362 IIKQIDYYFSDTNLVKDNYLRS--NMDEQGWVPITLIANFPRVKSLTSNVELILDSLKTS 419
           I+KQ++YYFSD NL   ++L    N D +G+VPI+++A+F ++K+L ++   + + L+ S
Sbjct: 118 ILKQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALITSHSQLANVLRNS 177

Query: 420 S--VVEVQGDKLRKR 432
           S  VV   G K++++
Sbjct: 178 SKLVVSEDGKKIKRQ 192


>Medtr7g117595.2 | LA-related protein 6 LA RNA-binding domain
           protein, putative | HC | chr7:48763422-48773797 |
           20130731
          Length = 363

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 4/75 (5%)

Query: 362 IIKQIDYYFSDTNLVKDNYLRS--NMDEQGWVPITLIANFPRVKSLTSNVELILDSLKTS 419
           I+KQ++YYFSD NL   ++L    N D +G+VPI+++A+F ++K+L ++   + + L+ S
Sbjct: 118 ILKQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALITSHSQLANVLRNS 177

Query: 420 S--VVEVQGDKLRKR 432
           S  VV   G K++++
Sbjct: 178 SKLVVSEDGKKIKRQ 192