Miyakogusa Predicted Gene

Lj1g3v2184140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2184140.1 Non Characterized Hit- tr|I1HFP9|I1HFP9_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,53.93,5e-19,coiled-coil,NULL; seg,NULL,CUFF.28693.1
         (231 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110202.1 | hypothetical protein | HC | chr3:51215510-5121...   101   7e-22
Medtr3g113940.1 | hypothetical protein | HC | chr3:53130213-5313...    99   5e-21
Medtr1g006605.1 | hypothetical protein | HC | chr1:56917-59471 |...    89   4e-18

>Medtr3g110202.1 | hypothetical protein | HC |
           chr3:51215510-51217962 | 20130731
          Length = 223

 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 54/64 (84%)

Query: 87  REKKVYDLPGQKRDPPEEKDPLRIFYETLYEQIPSSEMSQIWLMESGLLPKETALKVFEK 146
           RE+KVY LPGQK DPPEEK+PLRIFYE+L +QIP+SEM++ WLME GLL  + A K FEK
Sbjct: 95  RERKVYSLPGQKHDPPEEKEPLRIFYESLSKQIPTSEMAEFWLMEHGLLSPQKAKKAFEK 154

Query: 147 KQKK 150
           KQ+K
Sbjct: 155 KQRK 158


>Medtr3g113940.1 | hypothetical protein | HC |
           chr3:53130213-53133694 | 20130731
          Length = 263

 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/184 (46%), Positives = 98/184 (53%), Gaps = 30/184 (16%)

Query: 1   MPSEDSNIVKTEEEN---SVPKKTANAKKKP--------------------VTPASRSNA 37
           MPSEDS  VK +++N   S  KK  N+  KP                     T ASRS  
Sbjct: 1   MPSEDSKPVKKQDDNDKISSLKKPKNSNTKPLSKGSKLKKLLKEETEPISRATSASRSKV 60

Query: 38  KKELNYSDDDDM------PIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKKREKKV 91
           KKEL   DDD        PIA                                 K+ KKV
Sbjct: 61  KKELKDDDDDSDEDDDDKPIAQKISKTKVVKEEVKKKKKVKKEEEVVVTETK-VKKVKKV 119

Query: 92  YDLPGQKRDPPEEKDPLRIFYETLYEQIPSSEMSQIWLMESGLLPKETALKVFEKKQKKG 151
           YDLPGQKRDPPEE+DP R+FYETL+EQIP+SEM+QIWLMESGLLPKE A KVFEKKQKK 
Sbjct: 120 YDLPGQKRDPPEERDPSRVFYETLHEQIPTSEMAQIWLMESGLLPKEVAKKVFEKKQKKA 179

Query: 152 LHKL 155
           L ++
Sbjct: 180 LQQV 183


>Medtr1g006605.1 | hypothetical protein | HC | chr1:56917-59471 |
           20130731
          Length = 195

 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 44/49 (89%)

Query: 87  REKKVYDLPGQKRDPPEEKDPLRIFYETLYEQIPSSEMSQIWLMESGLL 135
           REKKVY LPGQK DPPEEK+PLRIFYE+L +QIP+SEM++ WLME G+L
Sbjct: 77  REKKVYSLPGQKHDPPEEKEPLRIFYESLSKQIPTSEMAEFWLMEHGML 125