Miyakogusa Predicted Gene

Lj1g3v2173050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2173050.1 tr|B9H4W6|B9H4W6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_559829 PE=4 SV=1,38.75,1e-17,
,CUFF.28688.1
         (511 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g113840.1 | hypothetical protein | HC | chr3:53098750-5309...   477   e-134
Medtr3g113840.2 | hypothetical protein | HC | chr3:53098750-5309...   456   e-128
Medtr1g025180.1 | hypothetical protein | HC | chr1:8019758-80236...   293   3e-79
Medtr1g025180.2 | hypothetical protein | HC | chr1:8021299-80236...   292   4e-79

>Medtr3g113840.1 | hypothetical protein | HC |
           chr3:53098750-53094685 | 20130731
          Length = 670

 Score =  477 bits (1227), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 290/557 (52%), Positives = 350/557 (62%), Gaps = 66/557 (11%)

Query: 1   MFPIINGSEDRTELDRESLPEKSLVLQGHKECANATFEASGTTQDASLISNRSPTGDAKI 60
           MFP   G+    E+ RESL + S+     +E  NATF+AS   +D +LI   S  G AKI
Sbjct: 134 MFPTSCGTNADNEVYRESLLKNSV---SQEESTNATFQASEAVEDTNLIPESSSMGAAKI 190

Query: 61  SSSNKTSGQEQ-----ADR------TASNTNMQAVPMIVRSENGREVASHDTELCLEMGL 109
           SSS      +      AD       TA   N+Q VPM+V+SENG +V  HD+EL +EMGL
Sbjct: 191 SSSETIDVDDNDLTGSADNLVATQITAPKVNLQGVPMMVKSENGCKVEVHDSELSIEMGL 250

Query: 110 NVTAQSLNSH----PDVEFEMAGGIDCKLKQHIIKHWKENEGPALWSALSSRGSARMDAS 165
           NV+ +S  SH     +VE+E  GGI CK +QHIIK+ +ENEG  L        +   +AS
Sbjct: 251 NVSTESQFSHIGGKVEVEYETVGGIGCKQEQHIIKYQRENEGLTLLPG----STYATNAS 306

Query: 166 ELQSSVA-KAPNWLNAAIYASKQDLKQSFSSGDKKQTSEVVIRRKSWKKCAAHVHISHLI 224
            LQSS A KAP+WLNAAI  SK DL +S SSG K   SE V+ +KSWK CAAHVHIS LI
Sbjct: 307 CLQSSAAAKAPHWLNAAICNSKHDLMESCSSGGK--ISEPVVHKKSWKSCAAHVHISQLI 364

Query: 225 RSLEVPNGQVAKEPDR-------VHHGTECGVLLETHNLNWMSNSNRSASGIVHSATVRS 277
           RSLEVP    AKEP+R       VH G++CGVL++  N N   N N    G VHSA++  
Sbjct: 365 RSLEVPKKHGAKEPERYECHQPRVHQGSKCGVLIKAQNSNGTRNGNSFDVGTVHSASLDI 424

Query: 278 SHETKSGTPQQHSRYHDMSQT---PAPGVYGPQKQNFNFLSLSV--GGTGLKVNNGFNEG 332
             ETK+G  QQ   Y D+S +   P P    P KQNFNFLSLS+  GG GLKV + F +G
Sbjct: 425 FPETKNGILQQQCHYLDISLSKDPPMPAKCDPLKQNFNFLSLSLSAGGNGLKVEDCFTKG 484

Query: 333 R-SRLELLSKSQVPYFQSLQQQHGLMPLPT-PQSQYASSTSYLDQLPAAGPQVRLQQPHY 390
              RLE  SKSQVPYF+S+QQQHGLMP+PT P +QY +STSY+DQLPAAGPQVRLQQPHY
Sbjct: 485 GIRRLEQFSKSQVPYFRSIQQQHGLMPIPTTPPNQY-TSTSYIDQLPAAGPQVRLQQPHY 543

Query: 391 YGTPLCGTQYSSTASYKQQQQSFWAVQLAANGGSSSVNCNIVRAQYPNWQQNGRVDSCAV 450
           YGTPLCGT YSS  SYKQQ Q+FWA QL A GG S VN N+ R QYPNW ++GR ++CAV
Sbjct: 544 YGTPLCGTNYSSAISYKQQYQNFWAAQLVAQGG-SGVNNNVTRVQYPNW-RSGRHETCAV 601

Query: 451 SPFAQV----------------ISSISQQKPLTLASSLHPSRTIGLDIHLPSVCEESMAR 494
           +P AQV                I+S S+Q+P T ASS+  SR  G+        EES  R
Sbjct: 602 NPGAQVMLPHHSLASLESLGSKITSTSEQQPFTPASSIPLSRMNGV--------EESRGR 653

Query: 495 FRSSGTPSLQLLCDERL 511
           F  S   SLQLLCDER+
Sbjct: 654 FHGSCASSLQLLCDERI 670


>Medtr3g113840.2 | hypothetical protein | HC |
           chr3:53098750-53093802 | 20130731
          Length = 652

 Score =  456 bits (1173), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 275/527 (52%), Positives = 335/527 (63%), Gaps = 58/527 (11%)

Query: 1   MFPIINGSEDRTELDRESLPEKSLVLQGHKECANATFEASGTTQDASLISNRSPTGDAKI 60
           MFP   G+    E+ RESL + S+     +E  NATF+AS   +D +LI   S  G AKI
Sbjct: 134 MFPTSCGTNADNEVYRESLLKNSV---SQEESTNATFQASEAVEDTNLIPESSSMGAAKI 190

Query: 61  SSSNKTSGQEQ-----ADR------TASNTNMQAVPMIVRSENGREVASHDTELCLEMGL 109
           SSS      +      AD       TA   N+Q VPM+V+SENG +V  HD+EL +EMGL
Sbjct: 191 SSSETIDVDDNDLTGSADNLVATQITAPKVNLQGVPMMVKSENGCKVEVHDSELSIEMGL 250

Query: 110 NVTAQSLNSH----PDVEFEMAGGIDCKLKQHIIKHWKENEGPALWSALSSRGSARMDAS 165
           NV+ +S  SH     +VE+E  GGI CK +QHIIK+ +ENEG  L        +   +AS
Sbjct: 251 NVSTESQFSHIGGKVEVEYETVGGIGCKQEQHIIKYQRENEGLTLLPG----STYATNAS 306

Query: 166 ELQSSVA-KAPNWLNAAIYASKQDLKQSFSSGDKKQTSEVVIRRKSWKKCAAHVHISHLI 224
            LQSS A KAP+WLNAAI  SK DL +S SSG K   SE V+ +KSWK CAAHVHIS LI
Sbjct: 307 CLQSSAAAKAPHWLNAAICNSKHDLMESCSSGGK--ISEPVVHKKSWKSCAAHVHISQLI 364

Query: 225 RSLEVPNGQVAKEPDR-------VHHGTECGVLLETHNLNWMSNSNRSASGIVHSATVRS 277
           RSLEVP    AKEP+R       VH G++CGVL++  N N   N N    G VHSA++  
Sbjct: 365 RSLEVPKKHGAKEPERYECHQPRVHQGSKCGVLIKAQNSNGTRNGNSFDVGTVHSASLDI 424

Query: 278 SHETKSGTPQQHSRYHDMSQT---PAPGVYGPQKQNFNFLSLSV--GGTGLKVNNGFNEG 332
             ETK+G  QQ   Y D+S +   P P    P KQNFNFLSLS+  GG GLKV + F +G
Sbjct: 425 FPETKNGILQQQCHYLDISLSKDPPMPAKCDPLKQNFNFLSLSLSAGGNGLKVEDCFTKG 484

Query: 333 R-SRLELLSKSQVPYFQSLQQQHGLMPLPT-PQSQYASSTSYLDQLPAAGPQVRLQQPHY 390
              RLE  SKSQVPYF+S+QQQHGLMP+PT P +QY +STSY+DQLPAAGPQVRLQQPHY
Sbjct: 485 GIRRLEQFSKSQVPYFRSIQQQHGLMPIPTTPPNQY-TSTSYIDQLPAAGPQVRLQQPHY 543

Query: 391 YGTPLCGTQYSSTASYKQQQQSFWAVQLAANGGSSSVNCNIVRAQYPNWQQNGRVDSCAV 450
           YGTPLCGT YSS  SYKQQ Q+FWA QL A GG S VN N+ R QYPNW ++GR ++CAV
Sbjct: 544 YGTPLCGTNYSSAISYKQQYQNFWAAQLVAQGG-SGVNNNVTRVQYPNW-RSGRHETCAV 601

Query: 451 SPFAQV----------------ISSISQQKPLTLASSLHPSRTIGLD 481
           +P AQV                I+S S+Q+P T ASS+  SR  G++
Sbjct: 602 NPGAQVMLPHHSLASLESLGSKITSTSEQQPFTPASSIPLSRMNGVE 648


>Medtr1g025180.1 | hypothetical protein | HC | chr1:8019758-8023607
           | 20130731
          Length = 620

 Score =  293 bits (750), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 201/480 (41%), Positives = 256/480 (53%), Gaps = 76/480 (15%)

Query: 1   MFPIINGSEDRTELDRESLPEKSLVLQGHKECANATFEASGTTQDASLISNRSPTGDAKI 60
           MFP    ++   ELD E   E S VLQ  KE  NA+ EAS   Q  S        G++  
Sbjct: 152 MFPRSGSNDIIKELDGEPFMENSSVLQDMKEKVNASLEASVIIQGESFCCESCLLGESSK 211

Query: 61  SSSNKTSGQEQADR---------TASNTNMQAVPMIVRSENGREVASHDTELCLEMGLNV 111
            ++   +GQE  +R         TA +T++Q +P  V+ E  ++VA  D+ELCL MGLN+
Sbjct: 212 ITNETINGQELFERAKLLVGSHSTAPSTDLQTMPETVKHECRKKVALDDSELCLAMGLNM 271

Query: 112 TAQS----LNSHPDVEFEMAGGIDCKLKQHIIKHWKENEGPALWSALSSRGSARMDASEL 167
           T +S        PDVE + A   D K KQ  +K   +NEG ALW  L S           
Sbjct: 272 TGKSRILQCERKPDVELDAARNFDSKQKQQSMKEQVKNEGLALWPGLFS----------- 320

Query: 168 QSSVAKAPNWLNAAIYASKQDLKQSFSSGDKKQTSEVVIRRKSWKKCAAHVHISHLIRSL 227
                                             S  V  ++S K+CA HV+IS  IRSL
Sbjct: 321 ---------------------------------VSYDVSPKRSRKRCATHVYISQTIRSL 347

Query: 228 EVPNGQVAKEPD-------RVHHGTECGVLLETHNLNWMSNSNRSASGIVHSATVRSSHE 280
           E P  +V KE +       R    ++ GVL E  NLN M N      G+V   T R+ +E
Sbjct: 348 ESPKQRVIKESNLHGCHETRASERSKYGVLSEVQNLNRMIN------GVVTCDTARNPYE 401

Query: 281 TKSGTPQQHSRYHDMSQTPAP-GVYGPQKQNFNFLSLSVGGTGLKVN-NGFNEGRSRLEL 338
           +K+G   Q   Y ++SQ  +  GVYGPQKQ+FN LSLS G  GLKV+ N +N+ RSRLE 
Sbjct: 402 SKNGILLQQCHYGEISQAASTYGVYGPQKQSFNLLSLSTGSYGLKVDDNNYNKVRSRLEP 461

Query: 339 LSKSQVPYFQSLQQQHGLMPLPTPQSQYASSTSYLDQLPAAGPQVRLQQPHYYGTPLCGT 398
           LS   VPYFQSL QQ  +MP+PT QS+YAS T YL+ +   GPQ++LQQPHYYG+ L GT
Sbjct: 462 LSNMHVPYFQSLAQQQRVMPIPTYQSRYAS-TVYLNHMTVGGPQLQLQQPHYYGSQLYGT 520

Query: 399 QYSSTASYKQQQQSFWAVQLAANGGSSSVNCNIVRAQYPNWQQNGRVDSCAVSPFA-QVI 457
           QYSST S KQ+QQ    +Q AA  G SSVN NI+R Q PNW Q+GR    A+ P A QVI
Sbjct: 521 QYSSTVSNKQEQQKNLGMQQAAQ-GRSSVNWNIMRTQNPNW-QSGRNYYSAMGPCAPQVI 578


>Medtr1g025180.2 | hypothetical protein | HC | chr1:8021299-8023607
           | 20130731
          Length = 469

 Score =  292 bits (748), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 201/480 (41%), Positives = 256/480 (53%), Gaps = 76/480 (15%)

Query: 1   MFPIINGSEDRTELDRESLPEKSLVLQGHKECANATFEASGTTQDASLISNRSPTGDAKI 60
           MFP    ++   ELD E   E S VLQ  KE  NA+ EAS   Q  S        G++  
Sbjct: 1   MFPRSGSNDIIKELDGEPFMENSSVLQDMKEKVNASLEASVIIQGESFCCESCLLGESSK 60

Query: 61  SSSNKTSGQEQADR---------TASNTNMQAVPMIVRSENGREVASHDTELCLEMGLNV 111
            ++   +GQE  +R         TA +T++Q +P  V+ E  ++VA  D+ELCL MGLN+
Sbjct: 61  ITNETINGQELFERAKLLVGSHSTAPSTDLQTMPETVKHECRKKVALDDSELCLAMGLNM 120

Query: 112 TAQS----LNSHPDVEFEMAGGIDCKLKQHIIKHWKENEGPALWSALSSRGSARMDASEL 167
           T +S        PDVE + A   D K KQ  +K   +NEG ALW  L S           
Sbjct: 121 TGKSRILQCERKPDVELDAARNFDSKQKQQSMKEQVKNEGLALWPGLFS----------- 169

Query: 168 QSSVAKAPNWLNAAIYASKQDLKQSFSSGDKKQTSEVVIRRKSWKKCAAHVHISHLIRSL 227
                                             S  V  ++S K+CA HV+IS  IRSL
Sbjct: 170 ---------------------------------VSYDVSPKRSRKRCATHVYISQTIRSL 196

Query: 228 EVPNGQVAKEPD-------RVHHGTECGVLLETHNLNWMSNSNRSASGIVHSATVRSSHE 280
           E P  +V KE +       R    ++ GVL E  NLN M N      G+V   T R+ +E
Sbjct: 197 ESPKQRVIKESNLHGCHETRASERSKYGVLSEVQNLNRMIN------GVVTCDTARNPYE 250

Query: 281 TKSGTPQQHSRYHDMSQTPAP-GVYGPQKQNFNFLSLSVGGTGLKVN-NGFNEGRSRLEL 338
           +K+G   Q   Y ++SQ  +  GVYGPQKQ+FN LSLS G  GLKV+ N +N+ RSRLE 
Sbjct: 251 SKNGILLQQCHYGEISQAASTYGVYGPQKQSFNLLSLSTGSYGLKVDDNNYNKVRSRLEP 310

Query: 339 LSKSQVPYFQSLQQQHGLMPLPTPQSQYASSTSYLDQLPAAGPQVRLQQPHYYGTPLCGT 398
           LS   VPYFQSL QQ  +MP+PT QS+YAS T YL+ +   GPQ++LQQPHYYG+ L GT
Sbjct: 311 LSNMHVPYFQSLAQQQRVMPIPTYQSRYAS-TVYLNHMTVGGPQLQLQQPHYYGSQLYGT 369

Query: 399 QYSSTASYKQQQQSFWAVQLAANGGSSSVNCNIVRAQYPNWQQNGRVDSCAVSPFA-QVI 457
           QYSST S KQ+QQ    +Q AA  G SSVN NI+R Q PNW Q+GR    A+ P A QVI
Sbjct: 370 QYSSTVSNKQEQQKNLGMQQAAQ-GRSSVNWNIMRTQNPNW-QSGRNYYSAMGPCAPQVI 427