Miyakogusa Predicted Gene

Lj1g3v2173030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2173030.1 Non Characterized Hit- tr|I1JT37|I1JT37_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,71.23,0.0000000000004,seg,NULL,CUFF.28681.1
         (121 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g025150.1 | hypothetical protein | LC | chr1:8011959-80122...    58   2e-09

>Medtr1g025150.1 | hypothetical protein | LC | chr1:8011959-8012210
           | 20130731
          Length = 83

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 38  MKLFNRLRKILMSLIF--LVPSRRSMTDSTHKNHPDRFEPPKTXXXXXXXXXXXXXNEAI 95
           MK+F+RLRK+LM  +F        S   S+   + +RFEPPKT             NEAI
Sbjct: 1   MKIFHRLRKVLMRFVFSSSHHRSSSRDSSSRHRNSERFEPPKT-SCSSYYSSYSHYNEAI 59

Query: 96  ADCIEFFNKSAQDGIVMDGRRKSDV 120
           +DCIEFFNK      V+DGR+ SDV
Sbjct: 60  SDCIEFFNKEG----VLDGRKSSDV 80