Miyakogusa Predicted Gene
- Lj1g3v2157640.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2157640.1 tr|G7KA43|G7KA43_MEDTR F-box protein SKIP19
OS=Medicago truncatula GN=MTR_5g062080 PE=4
SV=1,64.06,8e-17,F-box,F-box domain, cyclin-like; F-box domain,F-box
domain, cyclin-like; no description,NULL,CUFF.28656.1
(82 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g067615.1 | F-box/LRR protein | LC | chr3:30201111-3020339... 92 8e-20
Medtr6g015900.1 | F-box/LRR protein | LC | chr6:5574580-5573648 ... 91 2e-19
Medtr5g062080.1 | F-box/LRR protein | LC | chr5:25784472-2578371... 91 2e-19
Medtr3g067630.1 | F-box/LRR protein | LC | chr3:30230228-3023133... 91 3e-19
Medtr3g067645.1 | F-box/LRR protein | HC | chr3:30238909-3024079... 87 3e-18
Medtr3g067625.1 | F-box/LRR protein | LC | chr3:30222987-3022757... 87 4e-18
Medtr6g015890.1 | F-box/LRR protein | LC | chr6:5570201-5568006 ... 86 6e-18
Medtr8g040130.1 | F-box/LRR protein | LC | chr8:14934659-1493384... 85 1e-17
Medtr7g451730.1 | F-box/LRR protein | LC | chr7:17619325-1761820... 85 2e-17
Medtr7g047530.1 | F-box/LRR protein | LC | chr7:16644937-1664384... 85 2e-17
Medtr8g091730.1 | F-box/LRR protein | LC | chr8:38284347-3828622... 84 3e-17
Medtr5g036740.1 | F-box/LRR protein | LC | chr5:16053749-1605281... 83 6e-17
Medtr1g044795.1 | F-box/LRR protein | LC | chr1:16966376-1696531... 82 8e-17
Medtr1g045100.1 | F-box/LRR protein | LC | chr1:16955861-1695474... 82 9e-17
Medtr3g080310.1 | F-box/LRR protein | LC | chr3:36321437-3632055... 82 2e-16
Medtr3g065820.1 | F-box/LRR protein | HC | chr3:29720975-2972212... 80 5e-16
Medtr3g065890.1 | F-box/LRR protein | HC | chr3:29751756-2975295... 79 7e-16
Medtr8g006980.1 | F-box/LRR protein | LC | chr8:1153108-1152198 ... 79 8e-16
Medtr3g065590.1 | F-box/LRR protein | LC | chr3:29638565-2964017... 79 8e-16
Medtr3g066090.1 | F-box/LRR protein | LC | chr3:29856736-2985729... 79 9e-16
Medtr5g027890.1 | F-box/LRR protein | LC | chr5:11634854-1163576... 78 2e-15
Medtr3g437220.1 | F-box/LRR protein | LC | chr3:12569893-1257045... 76 8e-15
Medtr3g036480.1 | F-box/LRR protein, putative | LC | chr3:135463... 75 9e-15
Medtr3g065610.1 | F-box/LRR protein | HC | chr3:29646510-2964808... 75 1e-14
Medtr3g065620.1 | F-box/LRR protein, putative | LC | chr3:296488... 75 1e-14
Medtr3g065850.1 | F-box/LRR protein | LC | chr3:29747139-2972992... 74 4e-14
Medtr3g080350.1 | F-box/LRR protein | LC | chr3:36334369-3633354... 72 9e-14
Medtr3g080330.1 | F-box/LRR protein, putative | LC | chr3:363282... 71 2e-13
Medtr2g095850.1 | F-box/LRR protein | LC | chr2:40892691-4089095... 69 7e-13
Medtr3g080280.1 | F-box/LRR protein | LC | chr3:36314064-3631307... 68 2e-12
Medtr3g067990.1 | F-box/LRR protein, putative | LC | chr3:306242... 66 6e-12
Medtr2g018910.1 | F-box/LRR protein | HC | chr2:6040628-6044118 ... 62 8e-11
Medtr3g080360.1 | F-box/LRR protein | HC | chr3:36336952-3633584... 62 1e-10
Medtr2g018940.1 | F-box/LRR protein | HC | chr2:6045280-6047439 ... 58 2e-09
Medtr2g018950.1 | F-box/LRR protein | HC | chr2:6051919-6054233 ... 55 1e-08
Medtr2g018900.1 | F-box/LRR protein | LC | chr2:6037033-6038152 ... 54 4e-08
Medtr3g080270.1 | F-box/LRR protein, putative | LC | chr3:363099... 51 2e-07
Medtr3g065790.1 | F-box/LRR protein | LC | chr3:29712876-2971353... 46 9e-06
>Medtr3g067615.1 | F-box/LRR protein | LC | chr3:30201111-30203392
| 20130731
Length = 284
Score = 92.4 bits (228), Expect = 8e-20, Method: Composition-based stats.
Identities = 38/52 (73%), Positives = 42/52 (80%)
Query: 14 GPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTN 65
GPNWLELP+D+T NIL RL +EIV SA QVC LWWNICKDPLMWH I M +
Sbjct: 2 GPNWLELPKDITENILQRLSTIEIVTSACQVCPLWWNICKDPLMWHTIHMID 53
>Medtr6g015900.1 | F-box/LRR protein | LC | chr6:5574580-5573648 |
20130731
Length = 280
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 1 MMASKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHI 60
MM + EVEG TN PNWL LPRD+T NIL RL +++V SA QVC LWWNICKDP +WH
Sbjct: 1 MMMTNEVEGERTNMPNWLALPRDITVNILQRLDTIDVVTSACQVCPLWWNICKDPRVWHT 60
Query: 61 --IDMTN 65
I+MTN
Sbjct: 61 MQINMTN 67
>Medtr5g062080.1 | F-box/LRR protein | LC | chr5:25784472-25783713
| 20130731
Length = 234
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 2 MASKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHII 61
++ EVE NTN PNWLELPRDVTTNI RL ++V S QVC LWWNICKDP MW I
Sbjct: 6 ISEPEVETENTNEPNWLELPRDVTTNIFRRLNTFDVVTSVCQVCPLWWNICKDPFMWRSI 65
Query: 62 DMTN 65
MT+
Sbjct: 66 RMTD 69
>Medtr3g067630.1 | F-box/LRR protein | LC | chr3:30230228-30231330
| 20130731
Length = 328
Score = 90.5 bits (223), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 3 ASKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIID 62
++K+ + +T GPNWLELPRD+T+NIL RLGVVEI+ +A VC WW+ICKDP MW I
Sbjct: 7 STKKRKRESTMGPNWLELPRDITSNILQRLGVVEILTNARNVCPYWWSICKDPRMWRTIH 66
Query: 63 MTN 65
M N
Sbjct: 67 MIN 69
>Medtr3g067645.1 | F-box/LRR protein | HC | chr3:30238909-30240791
| 20130731
Length = 341
Score = 87.4 bits (215), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 51/72 (70%), Gaps = 6/72 (8%)
Query: 1 MMAS-----KEVEGVNTNGPNWLELPRDV-TTNILLRLGVVEIVMSASQVCSLWWNICKD 54
MMAS KEVEG + NWLELPRD+ TNIL RL + EI+ SA VC LWWNICKD
Sbjct: 1 MMASSSSPKKEVEGDSITVLNWLELPRDIIATNILQRLSITEIITSACLVCPLWWNICKD 60
Query: 55 PLMWHIIDMTNL 66
PLMW II++T L
Sbjct: 61 PLMWRIINLTIL 72
>Medtr3g067625.1 | F-box/LRR protein | LC | chr3:30222987-30227573
| 20130731
Length = 474
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 46/61 (75%)
Query: 5 KEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMT 64
K+ + +T GPNWLELPRD+T+NIL RLG VEI+ A VC WWNICKDPLMW I M+
Sbjct: 9 KKRKRESTMGPNWLELPRDITSNILQRLGPVEILKKARNVCPYWWNICKDPLMWRTIHMS 68
Query: 65 N 65
N
Sbjct: 69 N 69
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 35/51 (68%), Gaps = 11/51 (21%)
Query: 11 NTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHII 61
+T GPNWLELPRD+TTNIL RLG +EI WNICKDPLMW I
Sbjct: 389 STMGPNWLELPRDITTNILQRLGTIEI-----------WNICKDPLMWRTI 428
>Medtr6g015890.1 | F-box/LRR protein | LC | chr6:5570201-5568006 |
20130731
Length = 303
Score = 86.3 bits (212), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
Query: 4 SKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHI--I 61
+ EV G +TN PNWL LPRD+T NIL RL +++V SA QVC LWWNICKDPL+W I
Sbjct: 7 ANEVGGASTNMPNWLALPRDITVNILQRLDTIDVVTSACQVCPLWWNICKDPLVWRTMQI 66
Query: 62 DMTN 65
+MTN
Sbjct: 67 NMTN 70
>Medtr8g040130.1 | F-box/LRR protein | LC | chr8:14934659-14933846
| 20130731
Length = 223
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 44/58 (75%)
Query: 9 GVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTNL 66
V++ PNWLELPRDVT NIL RLG +EI+ SA QVC LWWNI KDP MWH + +TN
Sbjct: 2 AVSSVQPNWLELPRDVTANILQRLGAIEILASACQVCPLWWNIFKDPHMWHTVHITNF 59
>Medtr7g451730.1 | F-box/LRR protein | LC | chr7:17619325-17618205
| 20130731
Length = 229
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 45/60 (75%)
Query: 4 SKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDM 63
K+ + + GPNWL+LPRD+T NIL RL VEIV SAS VC+LWWNICK+PLMW I M
Sbjct: 19 KKKAKREISEGPNWLDLPRDITQNILQRLNAVEIVTSASLVCALWWNICKEPLMWRTIHM 78
>Medtr7g047530.1 | F-box/LRR protein | LC | chr7:16644937-16643844
| 20130731
Length = 220
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 45/60 (75%)
Query: 4 SKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDM 63
K+ + + GPNWL+LPRD+T NIL RL VEIV SAS VC+LWWNICK+PLMW I M
Sbjct: 10 KKKAKREISEGPNWLDLPRDITQNILQRLNAVEIVTSASLVCALWWNICKEPLMWRTIHM 69
>Medtr8g091730.1 | F-box/LRR protein | LC | chr8:38284347-38286223
| 20130731
Length = 308
Score = 84.0 bits (206), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 6 EVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDM 63
++E + TN PNWLELP+D+T+NIL RLG VEI+ +A VC WWNICKDP MW I M
Sbjct: 13 KLEIITTN-PNWLELPKDLTSNILKRLGAVEILTNARNVCPYWWNICKDPFMWREIQM 69
>Medtr5g036740.1 | F-box/LRR protein | LC | chr5:16053749-16052817
| 20130731
Length = 281
Score = 82.8 bits (203), Expect = 6e-17, Method: Composition-based stats.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 6 EVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPL 56
EVE +T GPNWL+LPRD+T+NIL RLG EI+ SA VC LWWNICKDP+
Sbjct: 2 EVESESTAGPNWLDLPRDLTSNILQRLGAFEILTSACGVCPLWWNICKDPI 52
>Medtr1g044795.1 | F-box/LRR protein | LC | chr1:16966376-16965316
| 20130731
Length = 287
Score = 82.4 bits (202), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 6 EVEGVNT-NGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDM 63
EVE +T PNWLELPRD+T NIL RL +EIV S QVC LWWNICKDP MWH I M
Sbjct: 10 EVERESTATEPNWLELPRDLTINILQRLDTIEIVTSVCQVCPLWWNICKDPHMWHTISM 68
>Medtr1g045100.1 | F-box/LRR protein | LC | chr1:16955861-16954746
| 20130731
Length = 285
Score = 82.4 bits (202), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 37/49 (75%)
Query: 15 PNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDM 63
PNWLELP+D+ NIL RL +EIV S QVC LWWNICKDPLMW I M
Sbjct: 21 PNWLELPKDLAINILQRLDTIEIVTSVCQVCPLWWNICKDPLMWRTISM 69
>Medtr3g080310.1 | F-box/LRR protein | LC | chr3:36321437-36320558
| 20130731
Length = 258
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Query: 6 EVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTN 65
E E +T GPNWL+LP D+T NIL RLG EIV SA +VC W NICKDPLMW II M+
Sbjct: 2 EEESESTTGPNWLDLPSDLTENILQRLGTFEIVTSACRVCPQWLNICKDPLMWCIIHMSY 61
Query: 66 LLPLTAGPRTSPF 78
+ R SP+
Sbjct: 62 V-------RKSPY 67
>Medtr3g065820.1 | F-box/LRR protein | HC | chr3:29720975-29722128
| 20130731
Length = 314
Score = 80.1 bits (196), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 43/61 (70%)
Query: 6 EVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTN 65
E+E +T PNWLELPRD+TTNIL RL EI+ +A VC WWNICKD MW I M++
Sbjct: 10 EMEVESTPKPNWLELPRDLTTNILPRLDSFEILTTARNVCPYWWNICKDSRMWRTIHMSD 69
Query: 66 L 66
+
Sbjct: 70 I 70
>Medtr3g065890.1 | F-box/LRR protein | HC | chr3:29751756-29752959
| 20130731
Length = 238
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 43/63 (68%)
Query: 2 MASKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHII 61
M K+V+ PNW+ELP D+T NIL RL VEIV SA VC LWWN+CKDPLMW I
Sbjct: 1 MKRKKVKVECMTKPNWIELPIDLTKNILRRLDTVEIVTSARNVCPLWWNVCKDPLMWSTI 60
Query: 62 DMT 64
MT
Sbjct: 61 KMT 63
>Medtr8g006980.1 | F-box/LRR protein | LC | chr8:1153108-1152198 |
20130731
Length = 271
Score = 79.3 bits (194), Expect = 8e-16, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 11 NTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTNL--LP 68
+T PNWL+LP D+ NIL RL VEIV SA VC LWW+ICKDPLMW I ++N+ +P
Sbjct: 13 STRNPNWLQLPIDLIRNILQRLDTVEIVTSARNVCPLWWHICKDPLMWRTIHISNINVIP 72
Query: 69 L 69
L
Sbjct: 73 L 73
>Medtr3g065590.1 | F-box/LRR protein | LC | chr3:29638565-29640179
| 20130731
Length = 315
Score = 79.3 bits (194), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 2 MASKEVEGVNTNG--PNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWH 59
MA+K+V+ NT G NWLE+P+DVT+NIL LG V++VM+A VC +W IC+DPLMW
Sbjct: 6 MATKKVKLENTLGLIRNWLEVPKDVTSNILKLLGAVDLVMNARLVCPMWREICRDPLMWK 65
Query: 60 IIDMTNLL 67
I+M N L
Sbjct: 66 SIEMINGL 73
>Medtr3g066090.1 | F-box/LRR protein | LC | chr3:29856736-29857297
| 20130731
Length = 152
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 43/60 (71%)
Query: 2 MASKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHII 61
+KE E +T PNWLEL R++T NIL RL +EIV SA QVC LWW+ICKDPL+W I
Sbjct: 6 FTAKEAECKSTMVPNWLELLREITANILQRLDTIEIVKSACQVCPLWWDICKDPLLWRTI 65
>Medtr5g027890.1 | F-box/LRR protein | LC | chr5:11634854-11635769
| 20130731
Length = 263
Score = 77.8 bits (190), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 43/62 (69%)
Query: 2 MASKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHII 61
++++E + PNWLELP D+ TNIL RL ++IV +A VC LWW+ICKDPLMW I
Sbjct: 6 ISARETGSESATVPNWLELPTDIITNILRRLDTIDIVKNACIVCPLWWSICKDPLMWRTI 65
Query: 62 DM 63
M
Sbjct: 66 RM 67
>Medtr3g437220.1 | F-box/LRR protein | LC | chr3:12569893-12570456
| 20130731
Length = 187
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 3 ASKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIID 62
+SKE+E +T PNWL+LP DVT +IL RL EI+ + VC LWW ICK+P+MW I
Sbjct: 6 SSKELEVKSTAKPNWLQLPTDVTADILFRLDTYEIMKNVRNVCPLWWKICKNPIMWQTIY 65
Query: 63 MTNL 66
M N
Sbjct: 66 MGNF 69
>Medtr3g036480.1 | F-box/LRR protein, putative | LC |
chr3:13546360-13547039 | 20130731
Length = 211
Score = 75.5 bits (184), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%)
Query: 1 MMASKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHI 60
+ +SKE+E +T PNWL+LP DVT +IL RL EI+ + VC LWW ICK+P+MW
Sbjct: 3 LSSSKELEVKSTAKPNWLQLPTDVTADILFRLDTYEIMKNVRNVCPLWWKICKNPIMWQT 62
Query: 61 IDMTNL 66
I M N
Sbjct: 63 IYMGNF 68
>Medtr3g065610.1 | F-box/LRR protein | HC | chr3:29646510-29648087
| 20130731
Length = 307
Score = 75.5 bits (184), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 2 MASKEVEGVNTNG--PNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWH 59
M + +V+ NT G NWLE+P+DVT+NIL LG V++VM+A VC +W IC+DPLMW
Sbjct: 6 METNKVKLENTLGLIRNWLEIPKDVTSNILKLLGAVDLVMNARLVCPMWREICRDPLMWK 65
Query: 60 IIDMTNLL 67
I+M N L
Sbjct: 66 SIEMINGL 73
>Medtr3g065620.1 | F-box/LRR protein, putative | LC |
chr3:29648851-29649911 | 20130731
Length = 273
Score = 75.5 bits (184), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 37/51 (72%)
Query: 13 NGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDM 63
+ PNWLELPRD+T NIL + VEIV +A VC L WNICKDPLMW I M
Sbjct: 14 DSPNWLELPRDITINILQGVDTVEIVTNACLVCPLSWNICKDPLMWRTIHM 64
>Medtr3g065850.1 | F-box/LRR protein | LC | chr3:29747139-29729925
| 20130731
Length = 263
Score = 73.6 bits (179), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 38/55 (69%)
Query: 11 NTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTN 65
+T PNWLELP +T NIL RLG ++IV SA VC LW IC+DPLMW I + +
Sbjct: 13 STTKPNWLELPIGLTKNILQRLGTIDIVTSARNVCPLWRKICQDPLMWRTIHIAS 67
>Medtr3g080350.1 | F-box/LRR protein | LC | chr3:36334369-36333549 |
20130731
Length = 203
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Query: 11 NTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTNLLPLT 70
T GP W +L D+T NIL RLG +EIV SA +VC WWNICKDPLMW I M +
Sbjct: 59 RTTGPYWPDLTSDLTANILQRLGTLEIVTSACRVCPQWWNICKDPLMWRTIRMCYI---- 114
Query: 71 AGPRTSPF 78
R SP+
Sbjct: 115 ---RISPY 119
>Medtr3g080330.1 | F-box/LRR protein, putative | LC |
chr3:36328269-36327390 | 20130731
Length = 261
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 15 PNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDM 63
PNW +LP D+T NIL RLG EI+ SA +V WWN+CKDP+MW I M
Sbjct: 11 PNWFDLPIDLTANILQRLGTFEILRSACRVSPQWWNVCKDPVMWRTIRM 59
>Medtr2g095850.1 | F-box/LRR protein | LC | chr2:40892691-40890950
| 20130731
Length = 197
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 4 SKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLM 57
+K+ + +T PNW+ELP+D+T+NIL RL VEI+ VC WWNICKDP M
Sbjct: 6 AKKHKFESTKNPNWVELPKDITSNILQRLNTVEILTKTRYVCPYWWNICKDPFM 59
>Medtr3g080280.1 | F-box/LRR protein | LC | chr3:36314064-36313079
| 20130731
Length = 293
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 8 EGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTNLL 67
E + PNWL+LP D+T NIL RLG+ EIV SA VC+ W ICKDPLMW I M +
Sbjct: 16 EESESTRPNWLDLPSDLTENILQRLGI-EIVTSACCVCTQWLKICKDPLMWRTIRMCYIC 74
Query: 68 PLT 70
L+
Sbjct: 75 DLS 77
>Medtr3g067990.1 | F-box/LRR protein, putative | LC |
chr3:30624253-30621366 | 20130731
Length = 258
Score = 66.2 bits (160), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 31/49 (63%), Gaps = 9/49 (18%)
Query: 15 PNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDM 63
PNWLELPRDVT+NIL + A VC WWNICKDP MW I M
Sbjct: 21 PNWLELPRDVTSNILTK---------ARYVCPYWWNICKDPFMWRKIHM 60
>Medtr2g018910.1 | F-box/LRR protein | HC | chr2:6040628-6044118 |
20130731
Length = 329
Score = 62.4 bits (150), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 10 VNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTNL 66
+N+ NWL+LP+DV I +LG ++ + A VC+ W I KDP ++H IDM N+
Sbjct: 21 LNSGERNWLDLPKDVVLTIFEKLGTIDTLHRAHNVCTTWRKISKDPFLYHTIDMPNI 77
>Medtr3g080360.1 | F-box/LRR protein | HC | chr3:36336952-36335849
| 20130731
Length = 285
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 6 EVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDM 63
E E +T PNWL+LP D+T NI RL V+ I+ S VC+ W ICK+PL W I M
Sbjct: 30 EEESESTKRPNWLDLPSDLTANIFKRLSVLTILSDVSLVCTQWLKICKNPLTWRTIYM 87
>Medtr2g018940.1 | F-box/LRR protein | HC | chr2:6045280-6047439 |
20130731
Length = 332
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 10 VNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTNL 66
+++ NWL+LP DV I +L ++++ A VC+ W I KDP ++H IDM N+
Sbjct: 18 IDSGERNWLDLPSDVVLTIFRKLHTIDLLHRAHNVCTTWRKISKDPFLYHTIDMPNI 74
>Medtr2g018950.1 | F-box/LRR protein | HC | chr2:6051919-6054233 |
20130731
Length = 325
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 10 VNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTNL 66
+++ NWL+LPRD +I +L +++++ A VC+ W I KDP ++ I+M NL
Sbjct: 17 IDSGERNWLDLPRDAVLSIFRKLDAIDLLVRAHNVCTTWRKISKDPFLFRTINMPNL 73
>Medtr2g018900.1 | F-box/LRR protein | LC | chr2:6037033-6038152 |
20130731
Length = 202
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 10 VNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQVCSLWWNICKDPLMWHIIDMTNLLPL 69
+++ NWL+LPRD +I +L ++I++ +VC+ W I KDP ++ IDM +L +
Sbjct: 22 LDSRERNWLDLPRDAVLSIFQKLPTIDILIRTPRVCTTWRKISKDPFLYRTIDMFDLGYI 81
Query: 70 TAG 72
+A
Sbjct: 82 SAS 84
>Medtr3g080270.1 | F-box/LRR protein, putative | LC |
chr3:36309926-36308982 | 20130731
Length = 242
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 6 EVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSASQV 44
EVE +T GPNWL+LP D+T NIL RLG EIV SA +
Sbjct: 2 EVERESTRGPNWLDLPIDLTANILHRLGAFEIVTSACEC 40
>Medtr3g065790.1 | F-box/LRR protein | LC | chr3:29712876-29713532
| 20130731
Length = 176
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 1 MMASKEVEGVNTNGPNWLELPRDVTTNILLRLGVVEIVMSA 41
+ +K+ +G +T PNWLELP D+ NIL RL VEIV SA
Sbjct: 3 LSCTKKAKGESTTKPNWLELPIDLMKNILQRLDTVEIVTSA 43