Miyakogusa Predicted Gene

Lj1g3v2156580.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2156580.2 CUFF.28660.2
         (385 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g052000.1 | E2F transcription factor | HC | chr4:18814210-...   541   e-154
Medtr1g105110.1 | E2F transcription factor | HC | chr1:25000070-...   419   e-117
Medtr3g113800.1 | E2F transcription factor | HC | chr3:53087588-...   223   2e-58
Medtr3g113800.2 | E2F transcription factor | HC | chr3:53087590-...   220   1e-57
Medtr4g106540.2 | E2F transcription factor-E2FE-like protein | H...    66   5e-11
Medtr4g106540.3 | E2F transcription factor-E2FE-like protein | H...    66   5e-11
Medtr4g106540.4 | E2F transcription factor-E2FE-like protein | H...    66   5e-11
Medtr4g106540.1 | E2F transcription factor-E2FE-like protein | H...    66   5e-11
Medtr4g106540.5 | E2F transcription factor-E2FE-like protein | H...    66   6e-11
Medtr4g106540.6 | E2F transcription factor-E2FE-like protein | H...    66   6e-11

>Medtr4g052000.1 | E2F transcription factor | HC |
           chr4:18814210-18820291 | 20130731
          Length = 460

 Score =  541 bits (1395), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 283/419 (67%), Positives = 313/419 (74%), Gaps = 42/419 (10%)

Query: 2   KRRLPFSSTNPPPFAPTADYHRFVSDHRHPPPHTDAEAVVVNSPM--------------- 46
           +R+LPFSS  PP F   ADYHRF  DHR      + EA+VV +P                
Sbjct: 19  QRQLPFSSMKPP-FLAAADYHRFAPDHRR-NQDLETEAIVVKTPQLKRKSEAADFEADSG 76

Query: 47  -----------------PISGKIRKSSKASRPTKCNRSKRFEPQTPGSILGSPSGNNLAL 89
                            P+SGK  K  K+SR TKCNRS     QTPGS +GSPSGNNL  
Sbjct: 77  DRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGT---QTPGSNIGSPSGNNLTP 133

Query: 90  AGSCRYDSSLGLLTKKFINLIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEK 149
           AG CRYDSSLGLLTKKFI LIKQAEDGILDLNNAADTLEVQKRRIYDITNV EGIGLIEK
Sbjct: 134 AGPCRYDSSLGLLTKKFIALIKQAEDGILDLNNAADTLEVQKRRIYDITNVFEGIGLIEK 193

Query: 150 KLKNRIQWKGQDVSRPGEANDSFASIQAEVENLTIEEHRLDEHIREVQDRLRDLSEDENN 209
           KLKNRIQWKG DVS+PGEA+DSFAS+QAE+ENLTIEE RLDE IRE+Q+RLR+LSEDENN
Sbjct: 194 KLKNRIQWKGLDVSKPGEADDSFASLQAEIENLTIEERRLDEQIREMQERLRNLSEDENN 253

Query: 210 QKYLFVTEEDMQTLPCFQDKTLIAIKAPHCTTLEVPEPDEAVDYPQRRFRIVLRSTMGPI 269
           +K+LFVTEED++ LPCFQ++TLIAIKAPH TTLEVP+PDEAVDYPQRR+RIVLRSTMGPI
Sbjct: 254 EKFLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPI 313

Query: 270 DVYLISQFVEKFEEIRGVDVAPTLPSSPE---FNKHQPIVVSEDIGSDQEMQAQDVNGTR 326
           DVYL+SQF EKFEEI GVDVA   P SPE    NK Q  VV ED G + E+Q QD  G  
Sbjct: 314 DVYLVSQFEEKFEEINGVDVASKFPPSPEVNKVNKDQSTVVPEDKGKEIEVQRQDGEGPS 373

Query: 327 SDLPTSQDFASGIMKIVPSDFDSDTDYWLSSNADVSITDMWKTELTAGVEWNNLYTVQE 385
           SDL  + DF SGIMKIVPSD  SD DYWL S+ADVSITDMW+TE   GVEWN L  +QE
Sbjct: 374 SDLNNNHDFVSGIMKIVPSDVASDADYWLLSDADVSITDMWRTE--PGVEWNELEALQE 430


>Medtr1g105110.1 | E2F transcription factor | HC |
           chr1:25000070-24993884 | 20130731
          Length = 463

 Score =  419 bits (1077), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/413 (57%), Positives = 290/413 (70%), Gaps = 39/413 (9%)

Query: 1   MKRRLPFSSTNPPPFAPTADYHRFVS-DHRHPPPHTDAEAVVVNSPM--------PISGK 51
           +KR L F ST PP FAPT +YH F + D R    H + EAV+V SP+           G 
Sbjct: 24  LKRHLAFVSTKPP-FAPTDEYHTFAAVDSRKVADHVN-EAVIVRSPVIKRKNGMNESEGD 81

Query: 52  IRKSS------------------KASRPTKCNRSKRFE--PQTPGSILGSPSGNNLALAG 91
            +KSS                  K  R  K   SK  +  P TP S  GSPS   L  AG
Sbjct: 82  SQKSSNSPGYNAMNSPFKTPLSAKGGRANKSRASKEGKSCPPTPISNAGSPS--PLTPAG 139

Query: 92  SCRYDSSLGLLTKKFINLIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKL 151
           SCRYDSSLGLLTKKFI+L+K+AEDGILDLN AA+TL+VQKRRIYDITNVLEGIGLIEK +
Sbjct: 140 SCRYDSSLGLLTKKFIHLLKRAEDGILDLNKAAETLQVQKRRIYDITNVLEGIGLIEKNI 199

Query: 152 KNRIQWKGQDVSRPGEANDSFASIQAEVENLTIEEHRLDEHIREVQDRLRDLSEDENNQK 211
           KNRI WKG + S PG  +   + +++EV+NL++EE RLD+ IRE+Q+RLR LSEDENNQK
Sbjct: 200 KNRIYWKGIESSTPGNVDGDISLLKSEVDNLSLEEQRLDDQIREMQERLRGLSEDENNQK 259

Query: 212 YLFVTEEDMQTLPCFQDKTLIAIKAPHCTTLEVPEPDEAVDYPQRRFRIVLRSTMGPIDV 271
           +LFVTEED++ LPCFQ++TLIAIKAPH TTLEVP+P+EAVD  QRR+RI+LRSTMGPIDV
Sbjct: 260 FLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPEEAVDELQRRYRIILRSTMGPIDV 319

Query: 272 YLISQFVEKFEEIRGVDVAPTLP--SSPEFNKHQP--IVVSEDIGSDQEMQAQDVNGTRS 327
           YLISQF EKFEEI G +   + P  SS E N+ Q   +V +E  G + E QA   + T S
Sbjct: 320 YLISQFEEKFEEINGAEPPASFPLASSSESNEQQATEMVPAECSGKELEPQALLSSQTYS 379

Query: 328 DLPTSQDFASGIMKIVPSDFDSDTDYWLSSNADVSITDMWKTELTAGVEWNNL 380
           DL  SQ+FA G+MKIVPSD D+D DYWL S+A+VSITDMW+T+  + V+W+ +
Sbjct: 380 DLNVSQEFAGGMMKIVPSDADNDADYWLLSDAEVSITDMWRTD--SNVDWSGV 430


>Medtr3g113800.1 | E2F transcription factor | HC |
           chr3:53087588-53083226 | 20130731
          Length = 363

 Score =  223 bits (569), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 108/191 (56%), Positives = 144/191 (75%)

Query: 94  RYDSSLGLLTKKFINLIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKN 153
           RYDSSLGLLTKKFI+LI +A+DG LDLN  A+ L+VQKRRIYDITNVLEGIGLIEK  KN
Sbjct: 102 RYDSSLGLLTKKFISLINEAKDGTLDLNKTAEILKVQKRRIYDITNVLEGIGLIEKTSKN 161

Query: 154 RIQWKGQDVSRPGEANDSFASIQAEVENLTIEEHRLDEHIREVQDRLRDLSEDENNQKYL 213
            I+WKG D   P E      +++ EV++L  EE +LD+ I E ++ +R+L E EN  KYL
Sbjct: 162 HIRWKGCDGLEPRELEHQVNTLKDEVDSLYAEEFKLDQCISERKELIRNLEEGENTGKYL 221

Query: 214 FVTEEDMQTLPCFQDKTLIAIKAPHCTTLEVPEPDEAVDYPQRRFRIVLRSTMGPIDVYL 273
           F T+ED+ TLPCFQ+K LI IKAP  + +EVP+PDE + + QR++R+++RS  GPI++YL
Sbjct: 222 FFTKEDILTLPCFQNKQLITIKAPKASFIEVPDPDEELGFHQRQYRMIVRSATGPINLYL 281

Query: 274 ISQFVEKFEEI 284
           +++   KFE +
Sbjct: 282 LNKHDHKFEGV 292


>Medtr3g113800.2 | E2F transcription factor | HC |
           chr3:53087590-53083246 | 20130731
          Length = 309

 Score =  220 bits (561), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 106/184 (57%), Positives = 139/184 (75%)

Query: 94  RYDSSLGLLTKKFINLIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKN 153
           RYDSSLGLLTKKFI+LI +A+DG LDLN  A+ L+VQKRRIYDITNVLEGIGLIEK  KN
Sbjct: 102 RYDSSLGLLTKKFISLINEAKDGTLDLNKTAEILKVQKRRIYDITNVLEGIGLIEKTSKN 161

Query: 154 RIQWKGQDVSRPGEANDSFASIQAEVENLTIEEHRLDEHIREVQDRLRDLSEDENNQKYL 213
            I+WKG D   P E      +++ EV++L  EE +LD+ I E ++ +R+L E EN  KYL
Sbjct: 162 HIRWKGCDGLEPRELEHQVNTLKDEVDSLYAEEFKLDQCISERKELIRNLEEGENTGKYL 221

Query: 214 FVTEEDMQTLPCFQDKTLIAIKAPHCTTLEVPEPDEAVDYPQRRFRIVLRSTMGPIDVYL 273
           F T+ED+ TLPCFQ+K LI IKAP  + +EVP+PDE + + QR++R+++RS  GPI++YL
Sbjct: 222 FFTKEDILTLPCFQNKQLITIKAPKASFIEVPDPDEELGFHQRQYRMIVRSATGPINLYL 281

Query: 274 ISQF 277
           +  F
Sbjct: 282 LKYF 285


>Medtr4g106540.2 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194065-44191173 | 20130731
          Length = 364

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 45/66 (68%)

Query: 94  RYDSSLGLLTKKFINLIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKN 153
           R   SLGLL   F++L  + +  ++ L++AA  L V++RRIYDI NVLE IG++ +K KN
Sbjct: 17  RKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAKN 76

Query: 154 RIQWKG 159
           +  WKG
Sbjct: 77  QYTWKG 82


>Medtr4g106540.3 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194429-44190467 | 20130731
          Length = 385

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 45/66 (68%)

Query: 94  RYDSSLGLLTKKFINLIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKN 153
           R   SLGLL   F++L  + +  ++ L++AA  L V++RRIYDI NVLE IG++ +K KN
Sbjct: 17  RKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAKN 76

Query: 154 RIQWKG 159
           +  WKG
Sbjct: 77  QYTWKG 82


>Medtr4g106540.4 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194343-44190467 | 20130731
          Length = 358

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 45/66 (68%)

Query: 94  RYDSSLGLLTKKFINLIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKN 153
           R   SLGLL   F++L  + +  ++ L++AA  L V++RRIYDI NVLE IG++ +K KN
Sbjct: 17  RKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAKN 76

Query: 154 RIQWKG 159
           +  WKG
Sbjct: 77  QYTWKG 82


>Medtr4g106540.1 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194355-44190467 | 20130731
          Length = 358

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 45/66 (68%)

Query: 94  RYDSSLGLLTKKFINLIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKN 153
           R   SLGLL   F++L  + +  ++ L++AA  L V++RRIYDI NVLE IG++ +K KN
Sbjct: 17  RKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAKN 76

Query: 154 RIQWKG 159
           +  WKG
Sbjct: 77  QYTWKG 82


>Medtr4g106540.5 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194316-44190574 | 20130731
          Length = 345

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 45/66 (68%)

Query: 94  RYDSSLGLLTKKFINLIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKN 153
           R   SLGLL   F++L  + +  ++ L++AA  L V++RRIYDI NVLE IG++ +K KN
Sbjct: 17  RKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAKN 76

Query: 154 RIQWKG 159
           +  WKG
Sbjct: 77  QYTWKG 82


>Medtr4g106540.6 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194316-44190574 | 20130731
          Length = 339

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 45/66 (68%)

Query: 94  RYDSSLGLLTKKFINLIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKN 153
           R   SLGLL   F++L  + +  ++ L++AA  L V++RRIYDI NVLE IG++ +K KN
Sbjct: 17  RKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAKN 76

Query: 154 RIQWKG 159
           +  WKG
Sbjct: 77  QYTWKG 82