Miyakogusa Predicted Gene

Lj1g3v2156570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2156570.1 Non Characterized Hit- tr|I1LT34|I1LT34_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37731 PE,91.94,0,kdsB:
3-deoxy-D-manno-octulosonate
cytidylyltransf,3-deoxy-D-manno-octulosonate
cytidylyltransferase,CUFF.28648.1
         (289 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g057850.1 | 3-deoxy-manno-octulosonate cytidylyltransferas...   455   e-128

>Medtr1g057850.1 | 3-deoxy-manno-octulosonate cytidylyltransferase |
           HC | chr1:25449538-25456814 | 20130731
          Length = 596

 Score =  455 bits (1171), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 211/239 (88%), Positives = 229/239 (95%)

Query: 51  RFASSRFQGKPLIQILGKPMIQRTWERAKLAATLDHVVVATDDEKIAECCRQFGADVVMT 110
           RFASSRF+GKPL+ ILGKPMIQRTWE AKLAA+LDH+VVATDDEKIA+CCR+FGADV+MT
Sbjct: 358 RFASSRFEGKPLVHILGKPMIQRTWESAKLAASLDHLVVATDDEKIADCCRKFGADVIMT 417

Query: 111 AESCRNGAERCNEAVQKLGKKYDIVVNIQGDEPLIEPEIIDGIVKALQAAPDAVFSTAVT 170
           +ESCRNG ERCNEA+QKL +KYDIVVNIQGDEPL+EPE+IDG+VKALQAAPDAVFSTAVT
Sbjct: 418 SESCRNGTERCNEALQKLERKYDIVVNIQGDEPLLEPEVIDGVVKALQAAPDAVFSTAVT 477

Query: 171 SLKPVDANDPNRVKCVVDNRDYAIYFSRGLIPFNKSGKVNPHFPYLLHLGIQSYDAKFLK 230
           +LKP DA+DPNRVKCVVDNR YAIYFSRGLIPFNKSGKVN  FPYLLHLGIQSYD KFLK
Sbjct: 478 ALKPEDAHDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNQQFPYLLHLGIQSYDTKFLK 537

Query: 231 IYSDLQPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVEKIESLMRERNLS 289
           IY DLQPTPLQLEEDLEQLKVLENGYKMKVIKVDH+AHGVDTPEDVEKIE+LMR+RNLS
Sbjct: 538 IYPDLQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVEKIEALMRQRNLS 596