Miyakogusa Predicted Gene

Lj1g3v2155490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2155490.1 Non Characterized Hit- tr|I1JCI9|I1JCI9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,49.5,2e-17,seg,NULL;
ZF_C3H1,Zinc finger, CCCH-type,CUFF.28643.1
         (418 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g019120.1 | zinc finger C-x8-C-x5-C-x3-H type family prote...   485   e-137
Medtr1g019120.2 | zinc finger C-x8-C-x5-C-x3-H type family prote...   308   9e-84
Medtr8g076080.1 | zinc finger (CCCH-type) family protein, putati...   171   1e-42
Medtr7g108390.1 | homeobox protein luminidependens protein, puta...    52   9e-07
Medtr7g108390.2 | homeobox protein luminidependens protein, puta...    52   1e-06

>Medtr1g019120.1 | zinc finger C-x8-C-x5-C-x3-H type family protein,
           putative | HC | chr1:5691251-5685913 | 20130731
          Length = 412

 Score =  485 bits (1249), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 270/427 (63%), Positives = 311/427 (72%), Gaps = 24/427 (5%)

Query: 1   MRG--SHRRVSWASDFNLCQVRLFLSDESPSQVGLNSQDHLQAKTSLLLHPGGAGSDDSL 58
           MRG    +RVSW S+ +LCQVRLFLS+ESPSQVGLNSQDHLQ K S LL  G AGSDD L
Sbjct: 1   MRGLRKSKRVSWPSELDLCQVRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDIL 60

Query: 59  PPGFEGTHASSQFEINLSQIPVISWTRPPKIVLNLTWQVVAGEESKEVEDQHKRELRVLE 118
           PPGFEGTH SSQF+I LS IPVISW +PPKIVL+LTWQVVAGEESKE+ DQH+RE+RVLE
Sbjct: 61  PPGFEGTHTSSQFDIKLSDIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLE 120

Query: 119 AIYPRISSIPSNPAVSVDVENSHHIDGQIPLIPITPIEDDDAVADTVSNVSQSLEQPTGI 178
           AIYPRISSIP NP +SVDV++SH+IDG I +IPITP+ED D  ADT+S          GI
Sbjct: 121 AIYPRISSIPPNP-ISVDVDDSHYIDGHIVVIPITPVEDGDVGADTLS---------PGI 170

Query: 179 LKVSSSATNMHLAGGLGSDVXXXXXXLTNIVKSNERGNLIDHELLKNILRSPEVIEKLVR 238
           L  S++ T M +     SDV      LT++VKS+E GNLID ELL NIL +PEVIEKLVR
Sbjct: 171 LDGSNTVTTMSMV----SDVAAASVALTSLVKSSEHGNLIDPELLNNILNNPEVIEKLVR 226

Query: 239 DYGVTNNSQYVHNVGPSSAAFSRPPIATNQGE----NALLSSVTSSYIHPTGGQAA-SVS 293
           +Y V  N+QY  N G SS  FS PP   NQ E    ++   S TSSY H TGGQ A ++S
Sbjct: 227 NYNV-QNAQYAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPTMS 285

Query: 294 TQWXXXXXXXXXXXXXXXXXXXKKDANYYKSLIQQHGGDKQETFPYSSSN-QIQQPVNQY 352
           TQW                    KD NYYKSLIQQHGGDKQE  PYSSSN Q QQP++ Y
Sbjct: 286 TQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQPLSNY 345

Query: 353 ETAYNPRAKALRPKIMKPCIFFNSSRGCRNGANCSYQHDASFQ-QRGSTVSGIQSSKRMK 411
           +T +N RAK  +PKI KPCIFFNSSRGCRNGANC++QHDASFQ Q+G+  SG+ SSKRMK
Sbjct: 346 DTVHNFRAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMHSSKRMK 405

Query: 412 LDNEISS 418
           +DNEISS
Sbjct: 406 MDNEISS 412


>Medtr1g019120.2 | zinc finger C-x8-C-x5-C-x3-H type family protein,
           putative | HC | chr1:5691251-5685913 | 20130731
          Length = 297

 Score =  308 bits (788), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 178/312 (57%), Positives = 208/312 (66%), Gaps = 22/312 (7%)

Query: 114 LRVLEAIYPRISSIPSNPAVSVDVENSHHIDGQIPLIPITPIEDDDAVADTVSNVSQSLE 173
           +RVLEAIYPRISSIP NP +SVDV++SH+IDG I +IPITP+ED D  ADT+S       
Sbjct: 1   MRVLEAIYPRISSIPPNP-ISVDVDDSHYIDGHIVVIPITPVEDGDVGADTLS------- 52

Query: 174 QPTGILKVSSSATNMHLAGGLGSDVXXXXXXLTNIVKSNERGNLIDHELLKNILRSPEVI 233
              GIL  S++ T M +     SDV      LT++VKS+E GNLID ELL NIL +PEVI
Sbjct: 53  --PGILDGSNTVTTMSMV----SDVAAASVALTSLVKSSEHGNLIDPELLNNILNNPEVI 106

Query: 234 EKLVRDYGVTNNSQYVHNVGPSSAAFSRPPIATNQGENALLSSVTSSYIHPT----GGQA 289
           EKLVR+Y V  N+QY  N G SS  FS PP   NQ E    SS   S         GGQ 
Sbjct: 107 EKLVRNYNV-QNAQYAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQM 165

Query: 290 A-SVSTQWXXXXXXXXXXXXXXXXXXXKKDANYYKSLIQQHGGDKQETFPYSSSN-QIQQ 347
           A ++STQW                    KD NYYKSLIQQHGGDKQE  PYSSSN Q QQ
Sbjct: 166 APTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQ 225

Query: 348 PVNQYETAYNPRAKALRPKIMKPCIFFNSSRGCRNGANCSYQHDASFQ-QRGSTVSGIQS 406
           P++ Y+T +N RAK  +PKI KPCIFFNSSRGCRNGANC++QHDASFQ Q+G+  SG+ S
Sbjct: 226 PLSNYDTVHNFRAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMHS 285

Query: 407 SKRMKLDNEISS 418
           SKRMK+DNEISS
Sbjct: 286 SKRMKMDNEISS 297


>Medtr8g076080.1 | zinc finger (CCCH-type) family protein, putative
           | HC | chr8:32205732-32197628 | 20130731
          Length = 557

 Score =  171 bits (432), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/260 (43%), Positives = 148/260 (56%), Gaps = 25/260 (9%)

Query: 7   RVSWASDFNLCQVRLFLSDESPSQVGLNSQDHLQAKTSLLLHPGGAGSDDSLPPGFEGTH 66
           RVSWAS  NLCQV+LFLS++ PS+VGLN QD L+AK S +L      S D LPPGFE  H
Sbjct: 10  RVSWASPANLCQVKLFLSEDYPSKVGLNLQDSLEAKASSMLCYSTNESID-LPPGFESGH 68

Query: 67  ASSQFEINLSQIPVISWTRPPKIVLNLTWQVVAGEESKEVEDQHKRELRVLEAIYPRISS 126
             +Q ++  S IP I W  P   V +  W V AG+ES+E E Q  RE+RVLEA+YPR S+
Sbjct: 69  FPNQSKVQFSHIPKIKWECPLSFVFSPNWLVAAGQESREKEVQKLREIRVLEAVYPRPSA 128

Query: 127 IPSNPAVSVDVENSHHIDGQIPLIP---------ITPIEDDDAVADTVSNVS-----QSL 172
           IP +P+VS+DVE   + D   PLIP         +T + +  A  +T  NV      Q +
Sbjct: 129 IPPSPSVSLDVEEEEYDDNSTPLIPIIPIEEEESMTNLPELAAAVNTHPNVQPQNLHQHM 188

Query: 173 EQPTGI-------LKVSSSATNMHLAG---GLGSDVXXXXXXLTNIVKSNERGNLIDHEL 222
              T I         VSS A  M LAG    L +D       +  I+KSNE+  LID +L
Sbjct: 189 SATTSISSDRNSSRTVSSDARLMPLAGVSSSLEADAAAASEVVAAILKSNEQAGLIDMDL 248

Query: 223 LKNILRSPEVIEKLVRDYGV 242
           L  IL  P++IE L+ ++GV
Sbjct: 249 LVKILNDPKMIENLINEHGV 268



 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 7/99 (7%)

Query: 317 KDANYYKSLIQQHGGDKQETFPYSSSNQIQQPVNQYE---TAYNPRAKALRPKIMKPCIF 373
           KD NYYK+LI+QHG D Q+       +QI    + ++    A+N     ++ K  K CI+
Sbjct: 463 KDVNYYKNLIRQHGADGQDKL----DSQIGSHHSNFQDMKLAHNNNQGEVKYKSKKQCIY 518

Query: 374 FNSSRGCRNGANCSYQHDASFQQRGSTVSGIQSSKRMKL 412
           FNSSRGCRNG++C +QHD S +       G QS+KR KL
Sbjct: 519 FNSSRGCRNGSDCPFQHDVSAESGAGNFLGGQSAKRFKL 557


>Medtr7g108390.1 | homeobox protein luminidependens protein,
           putative | HC | chr7:44122447-44133205 | 20130731
          Length = 1007

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 81  ISWTRPPKIVLNLTWQVVAGEESKEVEDQHKRELRVLEAIYPRISSIPSNPAVSVDVENS 140
           I W  P ++ L  TW+V AG +SKEV  Q  R  R  E IY     +PSNP    DVE  
Sbjct: 524 IPWKSPAEVKLEDTWRVGAGVDSKEVHVQENRNRRDKETIYKTAQEMPSNPKEPWDVEMD 583

Query: 141 HHIDGQIPL-IPITPIEDDDAV 161
           +  D  + L IPI  + D D V
Sbjct: 584 Y--DDSLTLEIPIEQLPDCDDV 603


>Medtr7g108390.2 | homeobox protein luminidependens protein,
           putative | HC | chr7:44122447-44131740 | 20130731
          Length = 774

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 81  ISWTRPPKIVLNLTWQVVAGEESKEVEDQHKRELRVLEAIYPRISSIPSNPAVSVDVENS 140
           I W  P ++ L  TW+V AG +SKEV  Q  R  R  E IY     +PSNP    DVE  
Sbjct: 524 IPWKSPAEVKLEDTWRVGAGVDSKEVHVQENRNRRDKETIYKTAQEMPSNPKEPWDVEMD 583

Query: 141 HHIDGQIPL-IPITPIEDDDAV 161
           +  D  + L IPI  + D D V
Sbjct: 584 Y--DDSLTLEIPIEQLPDCDDV 603