Miyakogusa Predicted Gene

Lj1g3v2155480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2155480.1 Non Characterized Hit- tr|C0PPM1|C0PPM1_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,34.46,0.00000000000002,seg,NULL; IQ,IQ motif, EF-hand binding site;
DUF4005,Domain of unknown function DUF4005,CUFF.28640.1
         (658 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g023760.1 | IQ calmodulin-binding motif protein | HC | chr...   412   e-115
Medtr1g023925.1 | IQ-domain protein, putative | LC | chr1:770850...    79   1e-14
Medtr8g466020.1 | IQ calmodulin-binding motif protein | LC | chr...    61   4e-09
Medtr7g007170.1 | IQ calmodulin-binding motif protein | LC | chr...    55   2e-07

>Medtr1g023760.1 | IQ calmodulin-binding motif protein | HC |
           chr1:7656302-7661637 | 20130731
          Length = 784

 Score =  412 bits (1060), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 274/535 (51%), Positives = 330/535 (61%), Gaps = 55/535 (10%)

Query: 154 VTKDVDEKTKDCT------SDIDSKPTV--GDSVLLTEDEGKGITYEDTNFKFQASRPTL 205
            T +  ++TKD T      +DI S+  +   DS L +EDE K  TY DTN  FQAS  + 
Sbjct: 275 CTTEQSDETKDSTHASQSETDIPSQVILQLSDSPLPSEDEEKTATYYDTNSHFQASLSSS 334

Query: 206 SIVKDDLERAPAEEAVAYDDAKVASAETESFQNEKSVSEASAPPELNVNYLDQKPEIPGD 265
           S++KD+LE +P E+ V YD +KV S E +SFQNE   S AS   E N     Q  EI G+
Sbjct: 335 SLIKDNLEESPPEKTVTYD-SKVTSTEIDSFQNEIMESNASVGHEPNS---PQNQEI-GE 389

Query: 266 KQKRSIKGFVSDQLDAEGKKPINGSSKASNPVFFAAQSKFEELSSMSNLGRTSSLPYQDA 325
           + K S K F SDQL+ EGKK   GS K SNP F AAQSKFEELSS SN GR S L  QD 
Sbjct: 390 QYKLSTKAFASDQLETEGKKITFGSRKLSNPSFIAAQSKFEELSSNSNSGRPSGLLDQDV 449

Query: 326 ASEFESQGDTSFVVTDTVHRSKE-LTSENPGPHLSRVSGSECGTELSITSTLDSPGVSEV 384
           +   ESQ D++++       SKE ++SEN  P+ SR +  E GT LSI+STLDSP  SE 
Sbjct: 450 S--VESQADSAYI-------SKEFISSENSTPYPSRNADPESGTVLSISSTLDSPDRSET 500

Query: 385 GAMENERGAKDLVEGTGNLENTIKHDNEGNVPCT-LPASDLATSVSNQSEIVDDISVNMV 443
             +E E  AKDLVEG  N EN   H  E N P + LP SD     S+Q E V+    N+V
Sbjct: 501 --LEIEHDAKDLVEGIVNPENKTDHGVEANTPTSNLPISD-----SDQLETVNGSRGNVV 553

Query: 444 LSVAAVDSGKPTIETETNASDFQKEQAEAVLHDLKSSPDASPRSHVTVPESQGTPSSQVS 503
            SV   +S +  +E E  ASD  +EQ E VL D   S  ASP S++T+PESQGTPSSQVS
Sbjct: 554 DSVMPENSKEHAVEPEKIASDLLREQTETVLQDFTYSQQASPGSYMTIPESQGTPSSQVS 613

Query: 504 VKPXXXXXXXXXXXXXXXXXXXXN-------------------SPANANHDSGSRGSGEQ 544
           VK                     N                   SPANANHDSGSRGS EQ
Sbjct: 614 VKTKENKINKTGSSSRRRVLSVGNKSPANSNQDSGSRVFVGTKSPANANHDSGSRGSREQ 673

Query: 545 LPKDQRNDGKRRNSFGSVKPDHIDQEP-KDNTSSNNSLPRFMQATQSARAKLNANNSPRS 603
           LPKDQ N GKRRNSFGS+KP+H DQEP KDN+SSNN+LPRFMQATQSA+AK+NAN+SPRS
Sbjct: 674 LPKDQLN-GKRRNSFGSIKPEHTDQEPTKDNSSSNNTLPRFMQATQSAKAKINANSSPRS 732

Query: 604 SPDVHEGDVQVIKRHSLPGSTGRQVSPRIQRSMSQAQQSTKANSEQSPQERKWLR 658
           SPDVH+ D+ + KRHSLPG+TG+Q SPR+++S+S A Q TK N      ERKW R
Sbjct: 733 SPDVHDTDINIKKRHSLPGATGKQGSPRVEQSLSPAPQGTKGNGS---TERKWQR 784



 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/176 (48%), Positives = 115/176 (65%), Gaps = 26/176 (14%)

Query: 5   TSSCFKLITCGGGDAVENH--ASQFQDSTDKRGWSFRKKSSTHRVLSN---TATPSSTAN 59
           +SSC +LITCGGG   E+H   S+ +DS DKRGWSFRK+S+ HRVLSN   TA  +S+ N
Sbjct: 4   SSSCLRLITCGGGSDKEDHHVVSEAKDSNDKRGWSFRKRSARHRVLSNTVITAETTSSEN 63

Query: 60  KESSQSSNFNFQPLPEPNLVNKISTP---NQKPQVSE-------TNVIDDAESNKVDVKN 109
           KE S+  + +FQ   EPN+V KI T    N+KPQ+S          ++ + E NKVDV N
Sbjct: 64  KEISEYPSISFQSSAEPNVVEKICTTDFSNEKPQLSSDVCSEMPETIVTETE-NKVDV-N 121

Query: 110 PPESSAAT---------AQRELLQVESIVKLQGAIRGYLVRKNSVGTLHCVQAVTK 156
           PPES+            A+R LL+ ++ VKLQ A+RG+LVR+++VGTL CVQA+ K
Sbjct: 122 PPESAVIIIQASIRGYLARRALLKSKNAVKLQAAVRGHLVRRHAVGTLRCVQAIAK 177


>Medtr1g023925.1 | IQ-domain protein, putative | LC |
           chr1:7708506-7707992 | 20130731
          Length = 107

 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 45/57 (78%), Gaps = 2/57 (3%)

Query: 540 GSGEQLPKDQRNDGKRRNSFGSVKPDHIDQEP-KDNTSSNNSLPRFMQATQSARAKL 595
            S EQ PKDQ N GKRRNS GS+KPDH DQE  +DN+SSNN LPRFMQ  QSA+AK+
Sbjct: 43  ASREQFPKDQLN-GKRRNSLGSLKPDHTDQETIRDNSSSNNFLPRFMQTAQSAKAKI 98


>Medtr8g466020.1 | IQ calmodulin-binding motif protein | LC |
           chr8:23571431-23572553 | 20130731
          Length = 298

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 34/138 (24%)

Query: 41  KSSTHRVLSN---TATPSSTANKESSQSSNFNFQPLPEPNLVNKISTP---NQKPQVSET 94
           K   + VLSN   T   +S  NK++S +          PN++ KI T    N+K Q+S  
Sbjct: 13  KCEINYVLSNIVITRETTSLTNKDTSAA----------PNVIEKICTTDFSNEKLQLSSN 62

Query: 95  -------NVIDDAESNKVDVKNPPESSAATAQ---------RELLQVESIVKLQGAIRGY 138
                   +I + ES  VDV NPPES+A   Q         R LL  +++VKLQ  +RG+
Sbjct: 63  ACSDMPGTIITEIES-MVDV-NPPESAALIIQASIRGYLVRRALLNSKNVVKLQAVVRGH 120

Query: 139 LVRKNSVGTLHCVQAVTK 156
           LVR+++VG    VQA+TK
Sbjct: 121 LVRRHAVGASRHVQAITK 138


>Medtr7g007170.1 | IQ calmodulin-binding motif protein | LC |
           chr7:1368690-1369635 | 20130731
          Length = 219

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 23/144 (15%)

Query: 86  NQKPQVSETN-------VIDDAESNKVDVKNPPESSAATAQ---------RELLQVESIV 129
           N+KP++S          +I + ES  +DV NPPES+A   Q         R LL+ +++V
Sbjct: 20  NKKPRLSSDACSEMPEIIITEIEST-MDV-NPPESAAIIIQASIRGYLVRRALLKSKNVV 77

Query: 130 KLQGAIRGYLVRKNSVGTLHCVQAVTKDVDEKTKDCTSDIDSKPTVGDSVLLTEDEGKGI 189
           KLQ  +R +LVR++ VG   C+QA+T     K +   S  +   T+G  V +   +G   
Sbjct: 78  KLQAVVRVHLVRRHDVGASRCIQAIT-----KMQALFSVPNHNSTMGLGVNIARMKGVFK 132

Query: 190 TYEDTNFKFQASRPTLSIVKDDLE 213
           + E   F  +  R  ++   D LE
Sbjct: 133 SMEADGFPIKRGRVPITYAPDILE 156