Miyakogusa Predicted Gene

Lj1g3v2153410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2153410.1 Non Characterized Hit- tr|I1JT52|I1JT52_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.1,0,GAGA_bind,GAGA
binding-like; FAMILY NOT
NAMED,NULL,NODE_46525_length_1000_cov_136.841995.path1.1
         (143 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g023660.2 | GAGA-binding transcriptional activator BBR/BPC...   267   3e-72
Medtr1g023660.1 | GAGA-binding transcriptional activator BBR/BPC...   267   3e-72
Medtr8g099780.1 | GAGA-binding transcriptional activator BBR/BPC...   211   2e-55
Medtr8g099780.2 | GAGA-binding transcriptional activator BBR/BPC...   211   2e-55

>Medtr1g023660.2 | GAGA-binding transcriptional activator
           BBR/BPC6-like protein | HC | chr1:7599732-7603354 |
           20130731
          Length = 340

 Score =  267 bits (682), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 122/144 (84%), Positives = 133/144 (92%), Gaps = 2/144 (1%)

Query: 2   MFG--KGHDWKSGQEMVNGGDDLNRQLGVSKADWKGQDLGLNQVAYDESTMPAPVCSCTG 59
           MF   K  +WKS +E++NG DDLN+QL +SKADWK QDL LNQVAYD+STMPAP CSCTG
Sbjct: 197 MFANNKELEWKSSEEIINGDDDLNKQLAISKADWKPQDLALNQVAYDDSTMPAPACSCTG 256

Query: 60  VLRQCYKWGNGGWQSSCCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFSKLLSRLAAEGH 119
           VLRQCYKWGNGGWQS+CCTTTLS+YPLPAVPNKRHARVGGRKMSGSAF+KLLSRLAAEGH
Sbjct: 257 VLRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGH 316

Query: 120 DLSNPVDLKDHWAKHGTNRYITIK 143
           DLS+PVDLKDHWAKHGTNRYITIK
Sbjct: 317 DLSHPVDLKDHWAKHGTNRYITIK 340


>Medtr1g023660.1 | GAGA-binding transcriptional activator
           BBR/BPC6-like protein | HC | chr1:7599725-7603391 |
           20130731
          Length = 340

 Score =  267 bits (682), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 122/144 (84%), Positives = 133/144 (92%), Gaps = 2/144 (1%)

Query: 2   MFG--KGHDWKSGQEMVNGGDDLNRQLGVSKADWKGQDLGLNQVAYDESTMPAPVCSCTG 59
           MF   K  +WKS +E++NG DDLN+QL +SKADWK QDL LNQVAYD+STMPAP CSCTG
Sbjct: 197 MFANNKELEWKSSEEIINGDDDLNKQLAISKADWKPQDLALNQVAYDDSTMPAPACSCTG 256

Query: 60  VLRQCYKWGNGGWQSSCCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFSKLLSRLAAEGH 119
           VLRQCYKWGNGGWQS+CCTTTLS+YPLPAVPNKRHARVGGRKMSGSAF+KLLSRLAAEGH
Sbjct: 257 VLRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGH 316

Query: 120 DLSNPVDLKDHWAKHGTNRYITIK 143
           DLS+PVDLKDHWAKHGTNRYITIK
Sbjct: 317 DLSHPVDLKDHWAKHGTNRYITIK 340


>Medtr8g099780.1 | GAGA-binding transcriptional activator
           BBR/BPC6-like protein | HC | chr8:40350058-40354207 |
           20130731
          Length = 312

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 110/129 (85%), Gaps = 4/129 (3%)

Query: 19  GDDLNRQLGVS----KADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQS 74
           G+DLNR+        K++W  QD+GLN +A+DE+ MP PVC+CTGV RQCYKWGNGGWQS
Sbjct: 184 GEDLNRKAYSEGTKIKSEWDRQDVGLNSIAFDETVMPVPVCTCTGVPRQCYKWGNGGWQS 243

Query: 75  SCCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFSKLLSRLAAEGHDLSNPVDLKDHWAKH 134
           SCCTTTLSM+PLP +PNKRHAR+GGRKMSG+ F +LLSR A+EGHDLS P+DLKD+WA+H
Sbjct: 244 SCCTTTLSMHPLPQLPNKRHARIGGRKMSGNVFRRLLSRFASEGHDLSIPLDLKDYWARH 303

Query: 135 GTNRYITIK 143
           GTNRYITIK
Sbjct: 304 GTNRYITIK 312


>Medtr8g099780.2 | GAGA-binding transcriptional activator
           BBR/BPC6-like protein | HC | chr8:40351570-40354207 |
           20130731
          Length = 312

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 110/129 (85%), Gaps = 4/129 (3%)

Query: 19  GDDLNRQLGVS----KADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQS 74
           G+DLNR+        K++W  QD+GLN +A+DE+ MP PVC+CTGV RQCYKWGNGGWQS
Sbjct: 184 GEDLNRKAYSEGTKIKSEWDRQDVGLNSIAFDETVMPVPVCTCTGVPRQCYKWGNGGWQS 243

Query: 75  SCCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFSKLLSRLAAEGHDLSNPVDLKDHWAKH 134
           SCCTTTLSM+PLP +PNKRHAR+GGRKMSG+ F +LLSR A+EGHDLS P+DLKD+WA+H
Sbjct: 244 SCCTTTLSMHPLPQLPNKRHARIGGRKMSGNVFRRLLSRFASEGHDLSIPLDLKDYWARH 303

Query: 135 GTNRYITIK 143
           GTNRYITIK
Sbjct: 304 GTNRYITIK 312